RNA–Protein interactions for RNA: ENST00000601032.5

LTBP4-229, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 1 (best)

Gene LTBP4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-229ENST00000601032 FAM19A3Q7Z5A8 133 aa11.8□□□□□ -0.52
LTBP4-229ENST00000601032 IGKV2-29A2NJV5 120 aaPredicted RBP11.79□□□□□ -0.52
LTBP4-229ENST00000601032 SMIM11BQ8TCY0 68 aa11.79□□□□□ -0.52
LTBP4-229ENST00000601032 LECT2O14960 151 aa11.79□□□□□ -0.52
LTBP4-229ENST00000601032 MRPL55Q7Z7F7 128 aaKnown RBP11.79□□□□□ -0.52
LTBP4-229ENST00000601032 FAM229BQ4G0N7 80 aa11.78□□□□□ -0.52
LTBP4-229ENST00000601032 IGHV3-38A0A0C4DH36 116 aa11.77□□□□□ -0.53
LTBP4-229ENST00000601032 LINC00337Q8N6G1 96 aa11.77□□□□□ -0.53
LTBP4-229ENST00000601032 TRGV1A0A0A0MS02 117 aa11.76□□□□□ -0.53
LTBP4-229ENST00000601032 CXCL6P80162 114 aa11.76□□□□□ -0.53
LTBP4-229ENST00000601032 Q6ZTI0 123 aa11.76□□□□□ -0.53
LTBP4-229ENST00000601032 Q1T7F1 81 aa11.76□□□□□ -0.53
LTBP4-229ENST00000601032 TRAV10A0A0B4J240 114 aa11.75□□□□□ -0.53
LTBP4-229ENST00000601032 IGHV3-53P01767 116 aa11.75□□□□□ -0.53
LTBP4-229ENST00000601032 TMEM256-PLSCR3K7ERE1 68 aa11.74□□□□□ -0.53
LTBP4-229ENST00000601032 DAD1P61803 113 aa11.74□□□□□ -0.53
LTBP4-229ENST00000601032 CHCHD7Q9BUK0 85 aa11.74□□□□□ -0.53
LTBP4-229ENST00000601032 PKD1L1Q8TDX9 2849 aa11.74□□□□□ -0.53
LTBP4-229ENST00000601032 ANK2Q01484 3957 aa11.74□□□□□ -0.53
LTBP4-229ENST00000601032 CSNK1G2-AS1Q8NCQ2 148 aa11.74□□□□□ -0.53
LTBP4-229ENST00000601032 C11orf68Q9H3H3 251 aaKnown RBP11.74□□□□□ -0.53
LTBP4-229ENST00000601032 IGKV2-28A0A075B6P5 120 aa11.73□□□□□ -0.53
LTBP4-229ENST00000601032 IGKV2D-28P01615 120 aa11.73□□□□□ -0.53
LTBP4-229ENST00000601032 RNASE13Q5GAN3 156 aaKnown RBP11.73□□□□□ -0.53
LTBP4-229ENST00000601032 RPL36AP83881 106 aaKnown RBP11.72□□□□□ -0.53
LTBP4-229ENST00000601032 RPL36ALQ969Q0 106 aaKnown RBP11.72□□□□□ -0.53
LTBP4-229ENST00000601032 NOP10Q9NPE3 64 aaKnown RBP11.72□□□□□ -0.53
LTBP4-229ENST00000601032 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.72□□□□□ -0.53
LTBP4-229ENST00000601032 SMIM1B2RUZ4 78 aa11.72□□□□□ -0.53
LTBP4-229ENST00000601032 TMEM254Q8TBM7 123 aa11.72□□□□□ -0.53
LTBP4-229ENST00000601032 SND1-IT1Q9HBX3 110 aa11.72□□□□□ -0.53
LTBP4-229ENST00000601032 LINC01547P58512 204 aaPredicted RBP11.71□□□□□ -0.53
LTBP4-229ENST00000601032 DNHD1Q96M86 4753 aa11.7□□□□□ -0.54
LTBP4-229ENST00000601032 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.541e-6■□□□□ 10.2
LTBP4-229ENST00000601032 CMC4P56277 68 aaPredicted RBP11.69□□□□□ -0.54
LTBP4-229ENST00000601032 TM2D3Q9BRN9 247 aa11.69□□□□□ -0.54
LTBP4-229ENST00000601032 Q6ZTC4 211 aa11.69□□□□□ -0.54
LTBP4-229ENST00000601032 LOC110117498A0A087WWA1 95 aa11.68□□□□□ -0.54
LTBP4-229ENST00000601032 C6orf223Q8N319 242 aa11.67□□□□□ -0.54
LTBP4-229ENST00000601032 LYRM9A8MSI8 78 aa11.67□□□□□ -0.54
LTBP4-229ENST00000601032 COX6A2Q02221 97 aa11.67□□□□□ -0.54
LTBP4-229ENST00000601032 NREPQ16612 68 aa11.67□□□□□ -0.54
LTBP4-229ENST00000601032 C4orf48Q5BLP8 95 aa11.67□□□□□ -0.54
LTBP4-229ENST00000601032 LINC00242Q5T6M2 205 aa11.67□□□□□ -0.54
LTBP4-229ENST00000601032 PRYO14603 147 aa11.66□□□□□ -0.54
LTBP4-229ENST00000601032 LOC100131303A0A0U1RQF7 123 aa11.65□□□□□ -0.54
LTBP4-229ENST00000601032 SLPIP03973 132 aa11.65□□□□□ -0.54
LTBP4-229ENST00000601032 K7EQD1 137 aa11.64□□□□□ -0.55
LTBP4-229ENST00000601032 NTM-AS1Q6ZSK4 140 aa11.64□□□□□ -0.55
LTBP4-229ENST00000601032 C16orf74Q96GX8 76 aa11.64□□□□□ -0.55
LTBP4-229ENST00000601032 PDE6GP18545 87 aa11.64□□□□□ -0.55
LTBP4-229ENST00000601032 Q6ZQT0 140 aa11.64□□□□□ -0.55
LTBP4-229ENST00000601032 Q8N3U1 123 aa11.64□□□□□ -0.55
LTBP4-229ENST00000601032 hDV103S1A0JD37 113 aa11.62□□□□□ -0.55
LTBP4-229ENST00000601032 DGAT2L7PQ6IED9 249 aa11.62□□□□□ -0.55
LTBP4-229ENST00000601032 Q6ZVQ6 151 aa11.62□□□□□ -0.55
LTBP4-229ENST00000601032 KTN1-AS1Q86SY8 53 aa11.62□□□□□ -0.55
LTBP4-229ENST00000601032 Q8N814 137 aa11.62□□□□□ -0.55
LTBP4-229ENST00000601032 CMYA5Q8N3K9 4069 aa11.62□□□□□ -0.55
LTBP4-229ENST00000601032 NBEAL2Q6ZNJ1 2754 aa11.61□□□□□ -0.55
LTBP4-229ENST00000601032 TRGV2A0A075B6R0 118 aa11.6□□□□□ -0.55
LTBP4-229ENST00000601032 HAMPP81172 84 aa11.6□□□□□ -0.55
LTBP4-229ENST00000601032 KRTAP21-3Q3LHN1 58 aa11.6□□□□□ -0.55
LTBP4-229ENST00000601032 RBM12B-AS1Q9P1G2 102 aa11.6□□□□□ -0.55
LTBP4-229ENST00000601032 CCL18P55774 89 aa11.59□□□□□ -0.55
LTBP4-229ENST00000601032 A0A087WZ39 114 aa11.58□□□□□ -0.56
LTBP4-229ENST00000601032 TRBV6-4A0A1B0GX49 114 aa11.58□□□□□ -0.56
LTBP4-229ENST00000601032 TRBV10-1A0A0K0K1A3 114 aa11.57□□□□□ -0.56
LTBP4-229ENST00000601032 X6R8D5 127 aa11.57□□□□□ -0.56
LTBP4-229ENST00000601032 MGAM2Q2M2H8 2515 aa11.57□□□□□ -0.56
LTBP4-229ENST00000601032 H3BQ85 93 aa11.57□□□□□ -0.56
LTBP4-229ENST00000601032 Q6ZRP5 223 aa11.57□□□□□ -0.56
LTBP4-229ENST00000601032 BPY2O14599 106 aa11.56□□□□□ -0.56
LTBP4-229ENST00000601032 UBE2BP63146 152 aa11.56□□□□□ -0.56
LTBP4-229ENST00000601032 C9orf66Q5T8R8 295 aa11.56□□□□□ -0.56
LTBP4-229ENST00000601032 NDUFS5O43920 106 aa11.55□□□□□ -0.56
LTBP4-229ENST00000601032 DEFB130BP0DP73 79 aa11.54□□□□□ -0.56
LTBP4-229ENST00000601032 DEFB130AP0DP74 79 aa11.54□□□□□ -0.56
LTBP4-229ENST00000601032 NOTCH1P46531 2555 aa11.54□□□□□ -0.56
LTBP4-229ENST00000601032 NBEAL1Q6ZS30 2694 aa11.54□□□□□ -0.56
LTBP4-229ENST00000601032 TRGV4A0A0C4DH28 118 aa11.53□□□□□ -0.56
LTBP4-229ENST00000601032 COX7B2Q8TF08 81 aa11.53□□□□□ -0.56
LTBP4-229ENST00000601032 LINC00588Q9Y4M8 146 aa11.53□□□□□ -0.56
LTBP4-229ENST00000601032 LINC00158P58513 81 aa11.52□□□□□ -0.56
LTBP4-229ENST00000601032 DEFB4AO15263 64 aa11.52□□□□□ -0.57
LTBP4-229ENST00000601032 LINC00612Q8N6U2 182 aa11.5□□□□□ -0.57
LTBP4-229ENST00000601032 OCR1Q9BZK8 76 aa11.5□□□□□ -0.57
LTBP4-229ENST00000601032 DEFB135Q30KP9 77 aa11.5□□□□□ -0.57
LTBP4-229ENST00000601032 CDC42SE2Q9NRR3 84 aa11.49□□□□□ -0.57
LTBP4-229ENST00000601032 TRAV22A0A0B4J277 110 aa11.48□□□□□ -0.57
LTBP4-229ENST00000601032 M0R378 163 aa11.48□□□□□ -0.57
LTBP4-229ENST00000601032 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
LTBP4-229ENST00000601032 IGLV4-60A0A075B6I1 120 aa11.45□□□□□ -0.58
LTBP4-229ENST00000601032 PHF5AQ7RTV0 110 aaKnown RBP11.45□□□□□ -0.58
LTBP4-229ENST00000601032 SYCNQ0VAF6 134 aa11.44□□□□□ -0.58
LTBP4-229ENST00000601032 IGHV4-28A0A0C4DH34 117 aa11.43□□□□□ -0.58
LTBP4-229ENST00000601032 GYPEP15421 78 aa11.43□□□□□ -0.58
LTBP4-229ENST00000601032 TRBV6-8A0A0A6YYG3 113 aa11.43□□□□□ -0.58
LTBP4-229ENST00000601032 UBE2L6O14933 153 aa11.43□□□□□ -0.58
LTBP4-229ENST00000601032 UBE2AP49459 152 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms