RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 FAM218AQ96MZ4 157 aa8.89□□□□□ -0.99
NOTCH3-206ENST00000601011 USP17L23D6RBM5 183 aa8.88□□□□□ -0.99
NOTCH3-206ENST00000601011 FAM19A5Q7Z5A7 132 aaPredicted RBP8.88□□□□□ -0.99
NOTCH3-206ENST00000601011 SOSTDC1Q6X4U4 206 aa8.88□□□□□ -0.99
NOTCH3-206ENST00000601011 MPLKIPQ8TAP9 179 aa8.88□□□□□ -0.99
NOTCH3-206ENST00000601011 IGKV2-28A0A075B6P5 120 aa8.87□□□□□ -0.99
NOTCH3-206ENST00000601011 IGKV2D-28P01615 120 aa8.87□□□□□ -0.99
NOTCH3-206ENST00000601011 C6orf99Q4VX62 202 aa8.87□□□□□ -0.99
NOTCH3-206ENST00000601011 C16orf95Q9H693 158 aa8.86□□□□□ -0.99
NOTCH3-206ENST00000601011 X6R8D5 127 aa8.86□□□□□ -0.99
NOTCH3-206ENST00000601011 KRTAP24-1Q3LI83 254 aa8.86□□□□□ -0.99
NOTCH3-206ENST00000601011 AKAP9Q99996 3911 aa8.86□□□□□ -0.99
NOTCH3-206ENST00000601011 M0R2N4 97 aa8.85□□□□□ -0.99
NOTCH3-206ENST00000601011 FAM19A1Q7Z5A9 133 aa8.85□□□□□ -0.99
NOTCH3-206ENST00000601011 TENM2Q9NT68 2774 aa8.85□□□□□ -0.99
NOTCH3-206ENST00000601011 NKAPP1Q8N9T2 125 aa8.85□□□□□ -0.99
NOTCH3-206ENST00000601011 LINC00846Q9NV44 126 aa8.85□□□□□ -0.99
NOTCH3-206ENST00000601011 C19orf73Q9NVV2 129 aa8.85□□□□□ -0.99
NOTCH3-206ENST00000601011 SPANXCQ9NY87 97 aa8.85□□□□□ -0.99
NOTCH3-206ENST00000601011 LYRM9A8MSI8 78 aa8.85□□□□□ -0.99
NOTCH3-206ENST00000601011 CYSRT1A8MQ03 144 aa8.84□□□□□ -0.99
NOTCH3-206ENST00000601011 SVIPQ8NHG7 77 aa8.84□□□□□ -0.99
NOTCH3-206ENST00000601011 SPANXDQ9BXN6 97 aa8.84□□□□□ -0.99
NOTCH3-206ENST00000601011 A0A096LNI7 61 aa8.84□□□□□ -0.99
NOTCH3-206ENST00000601011 LRCOL1A6NCL2 159 aa8.83□□□□□ -1
NOTCH3-206ENST00000601011 COX7CP15954 63 aa8.83□□□□□ -1
NOTCH3-206ENST00000601011 LINC00337Q8N6G1 96 aa8.83□□□□□ -1
NOTCH3-206ENST00000601011 UPK3BQ9BT76 320 aa8.83□□□□□ -1
NOTCH3-206ENST00000601011 MIFP14174 115 aa8.83□□□□□ -1
NOTCH3-206ENST00000601011 SMCR5Q8TEV8 140 aa8.83□□□□□ -1
NOTCH3-206ENST00000601011 PLAC8L1A1L4L8 177 aa8.83□□□□□ -1
NOTCH3-206ENST00000601011 PRR4Q16378 134 aa8.82□□□□□ -1
NOTCH3-206ENST00000601011 BRK1Q8WUW1 75 aa8.82□□□□□ -1
NOTCH3-206ENST00000601011 RPL37AP8A6NKH3 93 aa8.82□□□□□ -1
NOTCH3-206ENST00000601011 C10orf25Q5T742 122 aa8.82□□□□□ -1
NOTCH3-206ENST00000601011 FAM104AQ969W3 186 aa8.82□□□□□ -1
NOTCH3-206ENST00000601011 OVOL2Q9BRP0 275 aa8.81□□□□□ -1
NOTCH3-206ENST00000601011 H0YGX0 51 aa8.81□□□□□ -1
NOTCH3-206ENST00000601011 SMIM9A6NGZ8 99 aa8.8□□□□□ -1
NOTCH3-206ENST00000601011 CSNK1G2-AS1Q8NCQ2 148 aa8.8□□□□□ -1
NOTCH3-206ENST00000601011 IGHV3OR16-9A0A0B4J2B5 98 aa8.79□□□□□ -1
NOTCH3-206ENST00000601011 CD164L2Q6UWJ8 174 aa8.79□□□□□ -1
NOTCH3-206ENST00000601011 A0A087WZ39 114 aa8.78□□□□□ -1
NOTCH3-206ENST00000601011 C4orf26Q17RF5 130 aa8.78□□□□□ -1
NOTCH3-206ENST00000601011 SBSPONQ8IVN8 264 aa8.78□□□□□ -1
NOTCH3-206ENST00000601011 LITAFQ99732 161 aa8.78□□□□□ -1
NOTCH3-206ENST00000601011 CSDC2Q9Y534 153 aaKnown RBP8.78□□□□□ -1
NOTCH3-206ENST00000601011 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
NOTCH3-206ENST00000601011 Q6Q795 121 aa8.77□□□□□ -1.01
NOTCH3-206ENST00000601011 IBA57-AS1B1ANH7 110 aa8.77□□□□□ -1.01
NOTCH3-206ENST00000601011 SERP2Q8N6R1 65 aa8.77□□□□□ -1.01
NOTCH3-206ENST00000601011 Q6ZQY7 126 aa8.76□□□□□ -1.01
NOTCH3-206ENST00000601011 C3orf84H3BNL1 204 aa8.76□□□□□ -1.01
NOTCH3-206ENST00000601011 UBE2BP63146 152 aa8.76□□□□□ -1.01
NOTCH3-206ENST00000601011 LELP1Q5T871 98 aa8.75□□□□□ -1.01
NOTCH3-206ENST00000601011 LYPD5Q6UWN5 251 aa8.75□□□□□ -1.01
NOTCH3-206ENST00000601011 C5orf47Q569G3 176 aa8.75□□□□□ -1.01
NOTCH3-206ENST00000601011 Q8N9L7 120 aa8.75□□□□□ -1.01
NOTCH3-206ENST00000601011 KRTAP10-11P60412 298 aa8.74□□□□□ -1.01
NOTCH3-206ENST00000601011 ESRGQ1W209 222 aa8.73□□□□□ -1.01
NOTCH3-206ENST00000601011 IGLV5-39A0A0G2JS06 123 aa8.72□□□□□ -1.01
NOTCH3-206ENST00000601011 FAM240AA0A1B0GVK7 77 aa8.72□□□□□ -1.01
NOTCH3-206ENST00000601011 FAM236DA0A1B0GTK5 79 aa8.72□□□□□ -1.01
NOTCH3-206ENST00000601011 FAM236CP0DP71 79 aa8.72□□□□□ -1.01
NOTCH3-206ENST00000601011 Q8NAQ8 132 aa8.72□□□□□ -1.01
NOTCH3-206ENST00000601011 HIGD2AQ9BW72 106 aa8.72□□□□□ -1.01
NOTCH3-206ENST00000601011 TRBV10-3A0A0K0K1G6 114 aa8.71□□□□□ -1.02
NOTCH3-206ENST00000601011 TMEM256-PLSCR3K7ERE1 68 aa8.71□□□□□ -1.02
NOTCH3-206ENST00000601011 RMI2Q96E14 147 aa8.7□□□□□ -1.02
NOTCH3-206ENST00000601011 IMUPQ9GZP8 106 aa8.7□□□□□ -1.02
NOTCH3-206ENST00000601011 TIMM17BO60830 172 aa8.7□□□□□ -1.02
NOTCH3-206ENST00000601011 TRBV7-7A0A0K0K1E9 115 aa8.69□□□□□ -1.02
NOTCH3-206ENST00000601011 F8WEM9 126 aa8.69□□□□□ -1.02
NOTCH3-206ENST00000601011 JMJD7-PLA2G4BH0Y9G9 81 aa8.69□□□□□ -1.02
NOTCH3-206ENST00000601011 FUSP35637 526 aaKnown RBP eCLIP8.69□□□□□ -1.02
NOTCH3-206ENST00000601011 DIRC1Q969H9 104 aa8.69□□□□□ -1.02
NOTCH3-206ENST00000601011 Q6ZRU5 148 aa8.69□□□□□ -1.02
NOTCH3-206ENST00000601011 ETDCA0A1B0GVM5 59 aa8.68□□□□□ -1.02
NOTCH3-206ENST00000601011 SYCNQ0VAF6 134 aa8.68□□□□□ -1.02
NOTCH3-206ENST00000601011 Q8IZM0 81 aa8.68□□□□□ -1.02
NOTCH3-206ENST00000601011 RPL28P46779 137 aaKnown RBP8.68□□□□□ -1.02
NOTCH3-206ENST00000601011 NREPQ16612 68 aa8.67□□□□□ -1.02
NOTCH3-206ENST00000601011 IL17DQ8TAD2 202 aa8.65□□□□□ -1.02
NOTCH3-206ENST00000601011 TMEM258P61165 79 aa8.65□□□□□ -1.03
NOTCH3-206ENST00000601011 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.65□□□□□ -1.03
NOTCH3-206ENST00000601011 CYSTM1Q9H1C7 97 aa8.64□□□□□ -1.03
NOTCH3-206ENST00000601011 IGLV5-45A0A087WSX0 123 aa8.64□□□□□ -1.03
NOTCH3-206ENST00000601011 COX7BP24311 80 aa8.64□□□□□ -1.03
NOTCH3-206ENST00000601011 CCKP06307 115 aa8.63□□□□□ -1.03
NOTCH3-206ENST00000601011 A0A1B0GUV1 79 aa8.63□□□□□ -1.03
NOTCH3-206ENST00000601011 Q8N814 137 aa8.62□□□□□ -1.03
NOTCH3-206ENST00000601011 Q6JHZ5 121 aa8.62□□□□□ -1.03
NOTCH3-206ENST00000601011 CSMD3Q7Z407 3707 aa8.62□□□□□ -1.03
NOTCH3-206ENST00000601011 C6orf48Q9UBA6 75 aa8.61□□□□□ -1.03
NOTCH3-206ENST00000601011 TRAV10A0A0B4J240 114 aa8.61□□□□□ -1.03
NOTCH3-206ENST00000601011 LINC01561Q8N1V8 128 aa8.6□□□□□ -1.03
NOTCH3-206ENST00000601011 ANK3Q12955 4377 aaKnown RBP8.6□□□□□ -1.03
NOTCH3-206ENST00000601011 ZNF73O43830 326 aaPredicted RBP8.6□□□□□ -1.03
NOTCH3-206ENST00000601011 TGP01266 2768 aa8.6□□□□□ -1.03
NOTCH3-206ENST00000601011 FAM30AQ9NZY2 134 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms