RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 C10orf25Q5T742 122 aa10.13□□□□□ -0.79
SYMPK-213ENST00000599460 C19orf73Q9NVV2 129 aa10.13□□□□□ -0.79
SYMPK-213ENST00000599460 A0A0C4DFX4 3053 aa10.13□□□□□ -0.79
SYMPK-213ENST00000599460 LINC00337Q8N6G1 96 aa10.13□□□□□ -0.79
SYMPK-213ENST00000599460 LINC00588Q9Y4M8 146 aa10.13□□□□□ -0.79
SYMPK-213ENST00000599460 C1orf137Q5JT78 98 aa10.12□□□□□ -0.79
SYMPK-213ENST00000599460 MUC4Q99102 2169 aa10.12□□□□□ -0.79
SYMPK-213ENST00000599460 K7EIL1 84 aa10.12□□□□□ -0.79
SYMPK-213ENST00000599460 PRYO14603 147 aa10.12□□□□□ -0.79
SYMPK-213ENST00000599460 TRIOO75962 3097 aa10.11□□□□□ -0.79
SYMPK-213ENST00000599460 WWC2-AS2Q96NR7 200 aa10.11□□□□□ -0.79
SYMPK-213ENST00000599460 IGKV4-1P06312 121 aa10.1□□□□□ -0.79
SYMPK-213ENST00000599460 GIG44P09565 113 aaPredicted RBP10.1□□□□□ -0.79
SYMPK-213ENST00000599460 C6orf48Q9UBA6 75 aa10.1□□□□□ -0.79
SYMPK-213ENST00000599460 SEC61GP60059 68 aa10.1□□□□□ -0.79
SYMPK-213ENST00000599460 SPATA3Q8NHX4 192 aa10.1□□□□□ -0.79
SYMPK-213ENST00000599460 C22orf24Q9Y442 160 aa10.1□□□□□ -0.79
SYMPK-213ENST00000599460 FLNAP21333 2647 aaKnown RBP10.09□□□□□ -0.79
SYMPK-213ENST00000599460 WDFY4Q6ZS81 3184 aa10.08□□□□□ -0.8
SYMPK-213ENST00000599460 HELZ2Q9BYK8 2649 aaKnown RBP10.08□□□□□ -0.8
SYMPK-213ENST00000599460 AKAP13Q12802 2813 aa10.08□□□□□ -0.8
SYMPK-213ENST00000599460 SMIM26A0A096LP01 95 aa10.07□□□□□ -0.8
SYMPK-213ENST00000599460 C1orf195Q5TG92 126 aa10.07□□□□□ -0.8
SYMPK-213ENST00000599460 LINC00575Q6W349 94 aa10.06□□□□□ -0.8
SYMPK-213ENST00000599460 NBDYA0A0U1RRE5 68 aa10.06□□□□□ -0.8
SYMPK-213ENST00000599460 SERP1Q9Y6X1 66 aa10.05□□□□□ -0.8
SYMPK-213ENST00000599460 ITPR3Q14573 2671 aa10.05□□□□□ -0.8
SYMPK-213ENST00000599460 PRLHP81277 87 aa10.05□□□□□ -0.8
SYMPK-213ENST00000599460 CDIP1Q9H305 208 aa10.05□□□□□ -0.8
SYMPK-213ENST00000599460 Q9BRP9 147 aa10.04□□□□□ -0.8
SYMPK-213ENST00000599460 SNURFQ9Y675 71 aa10.04□□□□□ -0.8
SYMPK-213ENST00000599460 CIRBP-AS1Q8TBR5 109 aa10.04□□□□□ -0.8
SYMPK-213ENST00000599460 WFDC13Q8IUB5 93 aa10.04□□□□□ -0.8
SYMPK-213ENST00000599460 CFAP46Q8IYW2 2715 aa10.02□□□□□ -0.81
SYMPK-213ENST00000599460 DNAH10OSP0CZ25 163 aa10.01□□□□□ -0.81
SYMPK-213ENST00000599460 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
SYMPK-213ENST00000599460 LINC00167Q96N53 147 aa10□□□□□ -0.81
SYMPK-213ENST00000599460 TRAV7A0A075B6U4 112 aa10□□□□□ -0.81
SYMPK-213ENST00000599460 FAM19A3Q7Z5A8 133 aa10□□□□□ -0.81
SYMPK-213ENST00000599460 CFAP54Q96N23 3096 aa10□□□□□ -0.81
SYMPK-213ENST00000599460 CENPEQ02224 2701 aa9.99□□□□□ -0.81
SYMPK-213ENST00000599460 SMCR5Q8TEV8 140 aa9.99□□□□□ -0.81
SYMPK-213ENST00000599460 FAM229AH3BQW9 127 aa9.98□□□□□ -0.81
SYMPK-213ENST00000599460 USP24Q9UPU5 2620 aa9.98□□□□□ -0.81
SYMPK-213ENST00000599460 TRBV7-7A0A0K0K1E9 115 aa9.98□□□□□ -0.81
SYMPK-213ENST00000599460 GVQW2A0A096LPI5 108 aaPredicted RBP9.97□□□□□ -0.81
SYMPK-213ENST00000599460 LINC00612Q8N6U2 182 aa9.97□□□□□ -0.81
SYMPK-213ENST00000599460 RTL8CO15255 209 aa9.96□□□□□ -0.81
SYMPK-213ENST00000599460 CASC2Q6XLA1 102 aa9.95□□□□□ -0.82
SYMPK-213ENST00000599460 PRR15LQ9BU68 103 aa9.94□□□□□ -0.82
SYMPK-213ENST00000599460 TM2D3Q9BRN9 247 aa9.94□□□□□ -0.82
SYMPK-213ENST00000599460 PHF5AQ7RTV0 110 aaKnown RBP9.93□□□□□ -0.82
SYMPK-213ENST00000599460 A0A087WSZ3 146 aa9.93□□□□□ -0.82
SYMPK-213ENST00000599460 K7ERS5 55 aa9.93□□□□□ -0.82
SYMPK-213ENST00000599460 CR1P17927 2039 aa9.92□□□□□ -0.82
SYMPK-213ENST00000599460 A0A087WVE0 104 aa9.92□□□□□ -0.82
SYMPK-213ENST00000599460 DSPP15924 2871 aaKnown RBP9.92□□□□□ -0.82
SYMPK-213ENST00000599460 C16orf90A8MZG2 172 aa9.92□□□□□ -0.82
SYMPK-213ENST00000599460 KIAA0087Q14695 138 aa9.91□□□□□ -0.82
SYMPK-213ENST00000599460 Q6ZRP5 223 aa9.9□□□□□ -0.82
SYMPK-213ENST00000599460 PRO0461Q9UI25 63 aa9.9□□□□□ -0.82
SYMPK-213ENST00000599460 LITAFQ99732 161 aa9.9□□□□□ -0.82
SYMPK-213ENST00000599460 FAM30AQ9NZY2 134 aa9.9□□□□□ -0.82
SYMPK-213ENST00000599460 FAM218AQ96MZ4 157 aa9.89□□□□□ -0.83
SYMPK-213ENST00000599460 ELOF1P60002 83 aaKnown RBP9.89□□□□□ -0.83
SYMPK-213ENST00000599460 SMCPP49901 116 aaPredicted RBP9.88□□□□□ -0.83
SYMPK-213ENST00000599460 CHTF8P0CG12 524 aa9.88□□□□□ -0.83
SYMPK-213ENST00000599460 VPS13AQ96RL7 3174 aa9.88□□□□□ -0.83
SYMPK-213ENST00000599460 IGHV6-1A0A0B4J1U7 121 aa9.88□□□□□ -0.83
SYMPK-213ENST00000599460 PRR34Q9NV39 138 aa9.88□□□□□ -0.83
SYMPK-213ENST00000599460 DEFB116Q30KQ4 102 aa9.87□□□□□ -0.83
SYMPK-213ENST00000599460 TRBV7-6A0A0J9YX20 115 aa9.87□□□□□ -0.83
SYMPK-213ENST00000599460 J3QL48 77 aa9.87□□□□□ -0.83
SYMPK-213ENST00000599460 TNRC18O15417 2968 aaPredicted RBP9.87□□□□□ -0.83
SYMPK-213ENST00000599460 A6NED7 52 aa9.86□□□□□ -0.83
SYMPK-213ENST00000599460 LAMA1P25391 3075 aa9.85□□□□□ -0.83
SYMPK-213ENST00000599460 DNAH14Q0VDD8 3507 aa9.85□□□□□ -0.83
SYMPK-213ENST00000599460 CRYGAP11844 174 aa9.85□□□□□ -0.83
SYMPK-213ENST00000599460 LINC00846Q9NV44 126 aa9.85□□□□□ -0.83
SYMPK-213ENST00000599460 RPS28P62857 69 aaKnown RBP9.85□□□□□ -0.83
SYMPK-213ENST00000599460 Q6ZRX8 168 aa9.85□□□□□ -0.83
SYMPK-213ENST00000599460 Q6ZVQ6 151 aa9.84□□□□□ -0.83
SYMPK-213ENST00000599460 FAM168BA1KXE4 195 aa9.84□□□□□ -0.83
SYMPK-213ENST00000599460 PRO0628Q9UI54 55 aa9.84□□□□□ -0.83
SYMPK-213ENST00000599460 SPTBN5Q9NRC6 3674 aaKnown RBP9.83□□□□□ -0.84
SYMPK-213ENST00000599460 VCANP13611 3396 aa9.83□□□□□ -0.84
SYMPK-213ENST00000599460 ATRQ13535 2644 aa9.83□□□□□ -0.84
SYMPK-213ENST00000599460 IGSF10Q6WRI0 2623 aa9.82□□□□□ -0.84
SYMPK-213ENST00000599460 MGAM2Q2M2H8 2515 aa9.82□□□□□ -0.84
SYMPK-213ENST00000599460 VPREB1P12018 145 aa9.82□□□□□ -0.84
SYMPK-213ENST00000599460 C15orf56Q8N910 161 aa9.82□□□□□ -0.84
SYMPK-213ENST00000599460 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
SYMPK-213ENST00000599460 ZNF575Q86XF7 245 aa9.81□□□□□ -0.84
SYMPK-213ENST00000599460 PLA2G1BP04054 148 aaKnown RBP9.81□□□□□ -0.84
SYMPK-213ENST00000599460 Q8N9L7 120 aa9.81□□□□□ -0.84
SYMPK-213ENST00000599460 COL6A3P12111 3177 aa9.8□□□□□ -0.84
SYMPK-213ENST00000599460 LINC01547P58512 204 aaPredicted RBP9.8□□□□□ -0.84
SYMPK-213ENST00000599460 MOBPQ13875 183 aa9.8□□□□□ -0.84
SYMPK-213ENST00000599460 SERTAD4-AS1Q5TG53 156 aa9.8□□□□□ -0.84
SYMPK-213ENST00000599460 PRR4Q16378 134 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms