RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 PMVKQ15126 192 aa10.21□□□□□ -0.77
PNKP-210ENST00000597965 CST9LQ9H4G1 147 aa10.21□□□□□ -0.77
PNKP-210ENST00000597965 CHTOPQ9Y3Y2 248 aaKnown RBP10.21□□□□□ -0.77
PNKP-210ENST00000597965 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
PNKP-210ENST00000597965 NPSP0C0P6 89 aa10.2□□□□□ -0.78
PNKP-210ENST00000597965 CKS1BP61024 79 aa10.2□□□□□ -0.78
PNKP-210ENST00000597965 LBHQ53QV2 105 aaPredicted RBP10.2□□□□□ -0.78
PNKP-210ENST00000597965 ZC2HC1BQ5TFG8 222 aa10.2□□□□□ -0.78
PNKP-210ENST00000597965 ZNF861PO60384 105 aa10.19□□□□□ -0.78
PNKP-210ENST00000597965 ANKRD39Q53RE8 183 aa10.19□□□□□ -0.78
PNKP-210ENST00000597965 KRTAP7-1Q8IUC3 87 aa10.19□□□□□ -0.78
PNKP-210ENST00000597965 C14orf144Q96I85 54 aa10.19□□□□□ -0.78
PNKP-210ENST00000597965 UQCR10Q9UDW1 63 aa10.19□□□□□ -0.78
PNKP-210ENST00000597965 PLNP26678 52 aa10.18□□□□□ -0.78
PNKP-210ENST00000597965 C9orf129Q5T035 196 aaKnown RBP10.18□□□□□ -0.78
PNKP-210ENST00000597965 C2orf82Q6UX34 121 aa10.18□□□□□ -0.78
PNKP-210ENST00000597965 C6orf226Q5I0X4 101 aa10.17□□□□□ -0.78
PNKP-210ENST00000597965 AMELXQ99217 191 aa10.17□□□□□ -0.78
PNKP-210ENST00000597965 PAPPA-AS1Q5QFB9 102 aa10.16□□□□□ -0.78
PNKP-210ENST00000597965 VCX2Q9H322 139 aa10.16□□□□□ -0.78
PNKP-210ENST00000597965 COX8AP10176 69 aa10.15□□□□□ -0.78
PNKP-210ENST00000597965 SEC11AP67812 179 aa10.15□□□□□ -0.78
PNKP-210ENST00000597965 Q8IZM0 81 aa10.15□□□□□ -0.78
PNKP-210ENST00000597965 TOMM7Q9P0U1 55 aa10.14□□□□□ -0.79
PNKP-210ENST00000597965 C22orf24Q9Y442 160 aa10.14□□□□□ -0.79
PNKP-210ENST00000597965 C11orf86A6NJI1 115 aa10.13□□□□□ -0.79
PNKP-210ENST00000597965 RPL28P46779 137 aaKnown RBP10.13□□□□□ -0.79
PNKP-210ENST00000597965 SLC25A34Q6PIV7 304 aa10.13□□□□□ -0.79
PNKP-210ENST00000597965 TP73-AS1Q9UF72 201 aa10.13□□□□□ -0.79
PNKP-210ENST00000597965 HERVK_113P63121 156 aa10.12□□□□□ -0.79
PNKP-210ENST00000597965 IGKV2D-26A0A0A0MRZ7 120 aa10.11□□□□□ -0.79
PNKP-210ENST00000597965 DLEU1O43261 78 aa10.11□□□□□ -0.79
PNKP-210ENST00000597965 CXCL5P42830 114 aa10.11□□□□□ -0.79
PNKP-210ENST00000597965 FAM19A3Q7Z5A8 133 aa10.11□□□□□ -0.79
PNKP-210ENST00000597965 BOD1L2Q8IYS8 172 aa10.11□□□□□ -0.79
PNKP-210ENST00000597965 CRYGAP11844 174 aa10.1□□□□□ -0.79
PNKP-210ENST00000597965 MRPL55Q7Z7F7 128 aaKnown RBP10.1□□□□□ -0.79
PNKP-210ENST00000597965 NMUP48645 174 aa10.09□□□□□ -0.79
PNKP-210ENST00000597965 CTAG1AP78358 180 aa10.09□□□□□ -0.79
PNKP-210ENST00000597965 PCP2Q8IVA1 136 aa10.09□□□□□ -0.79
PNKP-210ENST00000597965 LINC00469Q8N7U9 141 aa10.09□□□□□ -0.79
PNKP-210ENST00000597965 GEMIN7Q9H840 131 aaKnown RBP10.09□□□□□ -0.79
PNKP-210ENST00000597965 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
PNKP-210ENST00000597965 MUC2Q02817 5179 aa10.09□□□□□ -0.79
PNKP-210ENST00000597965 E9PLD3 99 aa10.08□□□□□ -0.8
PNKP-210ENST00000597965 BCE1O60756 84 aa10.08□□□□□ -0.8
PNKP-210ENST00000597965 TSPAN13O95857 204 aa10.08□□□□□ -0.8
PNKP-210ENST00000597965 ZNF22P17026 224 aaPredicted RBP10.07□□□□□ -0.8
PNKP-210ENST00000597965 C2orf91Q6ZV80 131 aa10.07□□□□□ -0.8
PNKP-210ENST00000597965 TYMSOSQ8TAI1 123 aa10.07□□□□□ -0.8
PNKP-210ENST00000597965 TINCRA0A1B0GVN0 87 aa10.06□□□□□ -0.8
PNKP-210ENST00000597965 TMEM170BQ5T4T1 132 aa10.06□□□□□ -0.8
PNKP-210ENST00000597965 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
PNKP-210ENST00000597965 M0R143 59 aa10.05□□□□□ -0.8
PNKP-210ENST00000597965 HERVK_113P61574 105 aa10.05□□□□□ -0.8
PNKP-210ENST00000597965 SNHG12Q9BXW3 62 aa10.05□□□□□ -0.8
PNKP-210ENST00000597965 TTTY13Q9BZ97 58 aa10.05□□□□□ -0.8
PNKP-210ENST00000597965 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
PNKP-210ENST00000597965 IGLV5-45A0A087WSX0 123 aa10.02□□□□□ -0.81
PNKP-210ENST00000597965 A0A087X002 238 aa10.02□□□□□ -0.81
PNKP-210ENST00000597965 MYMXA0A1B0GTQ4 84 aa10.01□□□□□ -0.81
PNKP-210ENST00000597965 LEPROTO15243 131 aa10.01□□□□□ -0.81
PNKP-210ENST00000597965 LINC00167Q96N53 147 aa10.01□□□□□ -0.81
PNKP-210ENST00000597965 HIGD1BQ9P298 99 aa10.01□□□□□ -0.81
PNKP-210ENST00000597965 NKAPP1Q8N9T2 125 aa10□□□□□ -0.81
PNKP-210ENST00000597965 RPL37AP8A6NKH3 93 aa9.99□□□□□ -0.81
PNKP-210ENST00000597965 UBE2AP49459 152 aa9.99□□□□□ -0.81
PNKP-210ENST00000597965 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
PNKP-210ENST00000597965 FAM229BQ4G0N7 80 aa9.99□□□□□ -0.81
PNKP-210ENST00000597965 COX7B2Q8TF08 81 aa9.99□□□□□ -0.81
PNKP-210ENST00000597965 PLEKHB2Q96CS7 222 aa9.99□□□□□ -0.81
PNKP-210ENST00000597965 J3QQQ9 107 aa9.98□□□□□ -0.81
PNKP-210ENST00000597965 HINT1P49773 126 aaPredicted RBP9.98□□□□□ -0.81
PNKP-210ENST00000597965 IGLV5-37A0A075B6J1 123 aa9.97□□□□□ -0.81
PNKP-210ENST00000597965 SMIM1B2RUZ4 78 aa9.97□□□□□ -0.81
PNKP-210ENST00000597965 ZNF815PA8K554 130 aa9.96□□□□□ -0.82
PNKP-210ENST00000597965 H3BRM9 83 aa9.96□□□□□ -0.82
PNKP-210ENST00000597965 BVES-AS1Q5T3Y7 98 aa9.96□□□□□ -0.82
PNKP-210ENST00000597965 SPINK8P0C7L1 97 aa9.95□□□□□ -0.82
PNKP-210ENST00000597965 LGALS3P17931 250 aaKnown RBP9.95□□□□□ -0.82
PNKP-210ENST00000597965 HSD52Q0P140 79 aa9.95□□□□□ -0.82
PNKP-210ENST00000597965 BATFQ16520 125 aa9.95□□□□□ -0.82
PNKP-210ENST00000597965 LINC00304Q8N9R0 145 aa9.95□□□□□ -0.82
PNKP-210ENST00000597965 IGLV5-39A0A0G2JS06 123 aa9.94□□□□□ -0.82
PNKP-210ENST00000597965 GAGE10A6NGK3 116 aa9.94□□□□□ -0.82
PNKP-210ENST00000597965 KRTAP9-2Q9BYQ4 174 aa9.94□□□□□ -0.82
PNKP-210ENST00000597965 CDIP1Q9H305 208 aa9.94□□□□□ -0.82
PNKP-210ENST00000597965 KRTAP13-1Q8IUC0 172 aa9.93□□□□□ -0.82
PNKP-210ENST00000597965 TAL2Q16559 108 aa9.92□□□□□ -0.82
PNKP-210ENST00000597965 TPRXLQ17RH7 258 aa9.92□□□□□ -0.82
PNKP-210ENST00000597965 COL5A1-AS1Q5SY13 56 aa9.91□□□□□ -0.82
PNKP-210ENST00000597965 ANAPC11Q9NYG5 84 aa9.91□□□□□ -0.82
PNKP-210ENST00000597965 KRTAP13-2Q52LG2 175 aa9.9□□□□□ -0.82
PNKP-210ENST00000597965 IGKV2-28A0A075B6P5 120 aa9.89□□□□□ -0.83
PNKP-210ENST00000597965 IGKV2D-28P01615 120 aa9.89□□□□□ -0.83
PNKP-210ENST00000597965 RPL24P83731 157 aaKnown RBP9.89□□□□□ -0.83
PNKP-210ENST00000597965 SCGB1D4Q6XE38 83 aa9.89□□□□□ -0.83
PNKP-210ENST00000597965 NDUFA12Q9UI09 145 aa9.89□□□□□ -0.83
PNKP-210ENST00000597965 LCE2AQ5TA79 106 aaPredicted RBP9.88□□□□□ -0.83
PNKP-210ENST00000597965 CEND1Q8N111 149 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms