RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 LINC00167Q96N53 147 aa3.51□□□□□ -1.85
SSX4B-201ENST00000595235 IGLV5-37A0A075B6J1 123 aa3.5□□□□□ -1.85
SSX4B-201ENST00000595235 TMEM170BQ5T4T1 132 aa3.5□□□□□ -1.85
SSX4B-201ENST00000595235 Q8NDZ9 215 aa3.5□□□□□ -1.85
SSX4B-201ENST00000595235 CHCHD1Q96BP2 118 aaKnown RBP3.5□□□□□ -1.85
SSX4B-201ENST00000595235 ZNF625Q96I27 306 aaPredicted RBP3.5□□□□□ -1.85
SSX4B-201ENST00000595235 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
SSX4B-201ENST00000595235 ERG28Q9UKR5 140 aa3.5□□□□□ -1.85
SSX4B-201ENST00000595235 CHTOPQ9Y3Y2 248 aaKnown RBP3.5□□□□□ -1.85
SSX4B-201ENST00000595235 IGLV1-50A0A075B6I6 118 aa3.49□□□□□ -1.85
SSX4B-201ENST00000595235 TMEM223A0PJW6 202 aa3.49□□□□□ -1.85
SSX4B-201ENST00000595235 KRTAP9-7A8MTY7 169 aa3.49□□□□□ -1.85
SSX4B-201ENST00000595235 BCE1O60756 84 aa3.49□□□□□ -1.85
SSX4B-201ENST00000595235 VPREB1P12018 145 aa3.49□□□□□ -1.85
SSX4B-201ENST00000595235 FAM19A2Q8N3H0 131 aa3.49□□□□□ -1.85
SSX4B-201ENST00000595235 IFI27L1Q96BM0 104 aa3.49□□□□□ -1.85
SSX4B-201ENST00000595235 SND1-IT1Q9HBX3 110 aa3.49□□□□□ -1.85
SSX4B-201ENST00000595235 IGKV2-28A0A075B6P5 120 aa3.48□□□□□ -1.85
SSX4B-201ENST00000595235 A0A087X002 238 aa3.48□□□□□ -1.85
SSX4B-201ENST00000595235 TRAV12-1A0A0B4J245 112 aa3.48□□□□□ -1.85
SSX4B-201ENST00000595235 IGKV2D-28P01615 120 aa3.48□□□□□ -1.85
SSX4B-201ENST00000595235 TRGC2P03986 189 aa3.48□□□□□ -1.85
SSX4B-201ENST00000595235 LRP2P98164 4655 aa3.48□□□□□ -1.85
SSX4B-201ENST00000595235 KRTAP13-1Q8IUC0 172 aa3.48□□□□□ -1.85
SSX4B-201ENST00000595235 SLC7A5P1Q8MH63 180 aa3.48□□□□□ -1.85
SSX4B-201ENST00000595235 NKAPP1Q8N9T2 125 aa3.48□□□□□ -1.85
SSX4B-201ENST00000595235 HSBP1O75506 76 aa3.47□□□□□ -1.85
SSX4B-201ENST00000595235 SERF1AO75920 110 aa3.47□□□□□ -1.85
SSX4B-201ENST00000595235 RPL28P46779 137 aaKnown RBP3.47□□□□□ -1.85
SSX4B-201ENST00000595235 COX17Q14061 63 aa3.47□□□□□ -1.85
SSX4B-201ENST00000595235 LPAP08519 4548 aa3.46□□□□□ -1.86
SSX4B-201ENST00000595235 A0A0U1RRA0 63 aa3.46□□□□□ -1.86
SSX4B-201ENST00000595235 TMEM238C9JI98 176 aa3.46□□□□□ -1.86
SSX4B-201ENST00000595235 H0Y8G0 127 aa3.46□□□□□ -1.86
SSX4B-201ENST00000595235 RPL13AP40429 203 aaKnown RBP3.46□□□□□ -1.86
SSX4B-201ENST00000595235 UBE2AP49459 152 aa3.46□□□□□ -1.86
SSX4B-201ENST00000595235 PRLHP81277 87 aa3.46□□□□□ -1.86
SSX4B-201ENST00000595235 SFTA2Q6UW10 78 aa3.46□□□□□ -1.86
SSX4B-201ENST00000595235 ANAPC11Q9NYG5 84 aa3.46□□□□□ -1.86
SSX4B-201ENST00000595235 COLCA2A8K830 154 aa3.45□□□□□ -1.86
SSX4B-201ENST00000595235 M0R378 163 aa3.45□□□□□ -1.86
SSX4B-201ENST00000595235 LEPROTL1O95214 131 aa3.45□□□□□ -1.86
SSX4B-201ENST00000595235 SMIM13P0DJ93 91 aa3.45□□□□□ -1.86
SSX4B-201ENST00000595235 LINC00158P58513 81 aa3.45□□□□□ -1.86
SSX4B-201ENST00000595235 TSPEAR-AS2P59090 65 aa3.45□□□□□ -1.86
SSX4B-201ENST00000595235 RPL24P83731 157 aaKnown RBP3.45□□□□□ -1.86
SSX4B-201ENST00000595235 KRTAP13-2Q52LG2 175 aa3.45□□□□□ -1.86
SSX4B-201ENST00000595235 FAM19A1Q7Z5A9 133 aa3.45□□□□□ -1.86
SSX4B-201ENST00000595235 TMEM126AQ9H061 195 aa3.45□□□□□ -1.86
SSX4B-201ENST00000595235 NCR3O14931 201 aa3.44□□□□□ -1.86
SSX4B-201ENST00000595235 FABP4P15090 132 aa3.44□□□□□ -1.86
SSX4B-201ENST00000595235 MEIG1Q5JSS6 88 aa3.44□□□□□ -1.86
SSX4B-201ENST00000595235 MIR7-3HGQ8N6C7 128 aa3.44□□□□□ -1.86
SSX4B-201ENST00000595235 PMCHL2Q9BQD1 86 aa3.44□□□□□ -1.86
SSX4B-201ENST00000595235 RNF213Q63HN8 5207 aa3.43□□□□□ -1.86
SSX4B-201ENST00000595235 LEPROTO15243 131 aa3.43□□□□□ -1.86
SSX4B-201ENST00000595235 TSPAN13O95857 204 aa3.43□□□□□ -1.86
SSX4B-201ENST00000595235 CRYGAP11844 174 aa3.43□□□□□ -1.86
SSX4B-201ENST00000595235 HERV-K104P63124 156 aa3.43□□□□□ -1.86
SSX4B-201ENST00000595235 TYMSOSQ8TAI1 123 aa3.43□□□□□ -1.86
SSX4B-201ENST00000595235 NDUFA12Q9UI09 145 aa3.43□□□□□ -1.86
SSX4B-201ENST00000595235 MYMXA0A1B0GTQ4 84 aa3.42□□□□□ -1.86
SSX4B-201ENST00000595235 ATP6V1G1O75348 118 aa3.42□□□□□ -1.86
SSX4B-201ENST00000595235 DPM2O94777 84 aa3.42□□□□□ -1.86
SSX4B-201ENST00000595235 PLNP26678 52 aa3.42□□□□□ -1.86
SSX4B-201ENST00000595235 PRR4Q16378 134 aa3.42□□□□□ -1.86
SSX4B-201ENST00000595235 BOD1L2Q8IYS8 172 aa3.42□□□□□ -1.86
SSX4B-201ENST00000595235 DAND5Q8N907 189 aa3.42□□□□□ -1.86
SSX4B-201ENST00000595235 HSPB8Q9UJY1 196 aa3.42□□□□□ -1.86
SSX4B-201ENST00000595235 J3QQQ9 107 aa3.41□□□□□ -1.86
SSX4B-201ENST00000595235 IGKCP01834 107 aa3.41□□□□□ -1.86
SSX4B-201ENST00000595235 SPRR1AP35321 89 aa3.41□□□□□ -1.86
SSX4B-201ENST00000595235 FAM229BQ4G0N7 80 aa3.41□□□□□ -1.86
SSX4B-201ENST00000595235 C3orf22Q8N5N4 141 aa3.41□□□□□ -1.86
SSX4B-201ENST00000595235 PLEKHB2Q96CS7 222 aa3.41□□□□□ -1.86
SSX4B-201ENST00000595235 HIGD2AQ9BW72 106 aa3.41□□□□□ -1.86
SSX4B-201ENST00000595235 TRBV10-3A0A0K0K1G6 114 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 LINC00587B1AMM8 73 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 KRTAP4-16G5E9R7 235 aaPredicted RBP3.4□□□□□ -1.87
SSX4B-201ENST00000595235 PRYO14603 147 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HIST1H2BKO60814 126 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HIST1H2BJP06899 126 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 LGALS3P17931 250 aaKnown RBP3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HIST1H2BOP23527 126 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HIST1H2BBP33778 126 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HIST1H2BDP58876 126 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HERVK_113P61574 105 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HIST1H2BCP62807 126 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HIST2H2BEQ16778 126 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HIST1H2BHQ93079 126 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HIST1H2BNQ99877 126 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 HIST1H2BMQ99879 126 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 MAP1LC3CQ9BXW4 147 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 KCNQ1DNQ9H478 68 aa3.4□□□□□ -1.87
SSX4B-201ENST00000595235 IGKV2D-26A0A0A0MRZ7 120 aa3.39□□□□□ -1.87
SSX4B-201ENST00000595235 LOC107984156A0A0G2JMH3 177 aa3.39□□□□□ -1.87
SSX4B-201ENST00000595235 C9orf118A6NHY6 69 aa3.39□□□□□ -1.87
SSX4B-201ENST00000595235 NMUP48645 174 aa3.39□□□□□ -1.87
SSX4B-201ENST00000595235 LCE5AQ5TCM9 118 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms