RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 PRYO14603 147 aa8.81□□□□□ -1
DNMT1-228ENST00000592705 SEC61GP60059 68 aa8.81□□□□□ -1
DNMT1-228ENST00000592705 CXCL6P80162 114 aa8.81□□□□□ -1
DNMT1-228ENST00000592705 FAM218AQ96MZ4 157 aa8.81□□□□□ -1
DNMT1-228ENST00000592705 A8MTW9 85 aa8.81□□□□□ -1
DNMT1-228ENST00000592705 C10orf25Q5T742 122 aa8.81□□□□□ -1
DNMT1-228ENST00000592705 LITAFQ99732 161 aa8.8□□□□□ -1
DNMT1-228ENST00000592705 DNAH12Q6ZR08 3092 aa8.8□□□□□ -1
DNMT1-228ENST00000592705 PRR4Q16378 134 aa8.8□□□□□ -1
DNMT1-228ENST00000592705 Q6ZRU5 148 aa8.79□□□□□ -1
DNMT1-228ENST00000592705 H3BNG1 76 aa8.78□□□□□ -1
DNMT1-228ENST00000592705 K7EIL1 84 aa8.77□□□□□ -1
DNMT1-228ENST00000592705 CRYGAP11844 174 aa8.77□□□□□ -1
DNMT1-228ENST00000592705 ESRGQ1W209 222 aa8.77□□□□□ -1.01
DNMT1-228ENST00000592705 TMEM254Q8TBM7 123 aa8.76□□□□□ -1.01
DNMT1-228ENST00000592705 BCE1O60756 84 aa8.75□□□□□ -1.01
DNMT1-228ENST00000592705 Q8N9L7 120 aa8.75□□□□□ -1.01
DNMT1-228ENST00000592705 PRR15LQ9BU68 103 aa8.74□□□□□ -1.01
DNMT1-228ENST00000592705 LINC00208Q96KT6 92 aa8.74□□□□□ -1.01
DNMT1-228ENST00000592705 LIMD2Q9BT23 127 aa8.73□□□□□ -1.01
DNMT1-228ENST00000592705 TRBV7-6A0A0J9YX20 115 aa8.73□□□□□ -1.01
DNMT1-228ENST00000592705 SVIPQ8NHG7 77 aa8.73□□□□□ -1.01
DNMT1-228ENST00000592705 Q9BRP9 147 aa8.72□□□□□ -1.01
DNMT1-228ENST00000592705 X6R8D5 127 aa8.72□□□□□ -1.01
DNMT1-228ENST00000592705 A6NED7 52 aa8.72□□□□□ -1.01
DNMT1-228ENST00000592705 RTL8CO15255 209 aa8.71□□□□□ -1.01
DNMT1-228ENST00000592705 C6orf48Q9UBA6 75 aa8.71□□□□□ -1.01
DNMT1-228ENST00000592705 LOC110117498A0A087WWA1 95 aa8.7□□□□□ -1.02
DNMT1-228ENST00000592705 A0A087WSZ3 146 aa8.7□□□□□ -1.02
DNMT1-228ENST00000592705 C1orf195Q5TG92 126 aa8.69□□□□□ -1.02
DNMT1-228ENST00000592705 LINC00336Q6ZUF6 198 aa8.69□□□□□ -1.02
DNMT1-228ENST00000592705 HCG22E2RYF7 251 aa8.69□□□□□ -1.02
DNMT1-228ENST00000592705 ELOF1P60002 83 aaKnown RBP8.69□□□□□ -1.02
DNMT1-228ENST00000592705 Q6ZQT0 140 aa8.69□□□□□ -1.02
DNMT1-228ENST00000592705 BPTFQ12830 3046 aa8.69□□□□□ -1.02
DNMT1-228ENST00000592705 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
DNMT1-228ENST00000592705 RPS28P62857 69 aaKnown RBP8.68□□□□□ -1.02
DNMT1-228ENST00000592705 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
DNMT1-228ENST00000592705 A0A1B0GW54 56 aa8.67□□□□□ -1.02
DNMT1-228ENST00000592705 MUC4Q99102 2169 aa8.67□□□□□ -1.02
DNMT1-228ENST00000592705 Q8NAQ8 132 aa8.67□□□□□ -1.02
DNMT1-228ENST00000592705 CFAP46Q8IYW2 2715 aa8.66□□□□□ -1.02
DNMT1-228ENST00000592705 Q6ZRP5 223 aa8.66□□□□□ -1.02
DNMT1-228ENST00000592705 A0A096LNT2 108 aa8.65□□□□□ -1.02
DNMT1-228ENST00000592705 LINC00588Q9Y4M8 146 aa8.65□□□□□ -1.02
DNMT1-228ENST00000592705 H0Y9P7 68 aa8.65□□□□□ -1.03
DNMT1-228ENST00000592705 BAHCC1Q9P281 2608 aa8.63□□□□□ -1.03
DNMT1-228ENST00000592705 KRTAP10-11P60412 298 aa8.63□□□□□ -1.03
DNMT1-228ENST00000592705 SMCR5Q8TEV8 140 aa8.63□□□□□ -1.03
DNMT1-228ENST00000592705 hDV103S1A0JD37 113 aa8.63□□□□□ -1.03
DNMT1-228ENST00000592705 GVQW2A0A096LPI5 108 aaPredicted RBP8.63□□□□□ -1.03
DNMT1-228ENST00000592705 PRLHP81277 87 aa8.63□□□□□ -1.03
DNMT1-228ENST00000592705 DEFB116Q30KQ4 102 aa8.63□□□□□ -1.03
DNMT1-228ENST00000592705 IGHV6-1A0A0B4J1U7 121 aa8.62□□□□□ -1.03
DNMT1-228ENST00000592705 RPL37AP61513 92 aaKnown RBP8.62□□□□□ -1.03
DNMT1-228ENST00000592705 SMIM29Q86T20 159 aa8.62□□□□□ -1.03
DNMT1-228ENST00000592705 LINC00167Q96N53 147 aa8.62□□□□□ -1.03
DNMT1-228ENST00000592705 CEP350Q5VT06 3117 aa8.61□□□□□ -1.03
DNMT1-228ENST00000592705 STAB1Q9NY15 2570 aa8.6□□□□□ -1.03
DNMT1-228ENST00000592705 FLNAP21333 2647 aaKnown RBP8.6□□□□□ -1.03
DNMT1-228ENST00000592705 EIF4EBP3O60516 100 aaPredicted RBP8.6□□□□□ -1.03
DNMT1-228ENST00000592705 C19orf73Q9NVV2 129 aa8.59□□□□□ -1.03
DNMT1-228ENST00000592705 ITPR3Q14573 2671 aa8.59□□□□□ -1.03
DNMT1-228ENST00000592705 IGLV6-57P01721 117 aa8.59□□□□□ -1.03
DNMT1-228ENST00000592705 CSNK1G2-AS1Q8NCQ2 148 aa8.59□□□□□ -1.03
DNMT1-228ENST00000592705 TEP1Q99973 2627 aaKnown RBP8.58□□□□□ -1.04
DNMT1-228ENST00000592705 Q6ZRX8 168 aa8.58□□□□□ -1.04
DNMT1-228ENST00000592705 KRTAP1-3Q8IUG1 177 aa8.57□□□□□ -1.04
DNMT1-228ENST00000592705 K7ERS5 55 aa8.57□□□□□ -1.04
DNMT1-228ENST00000592705 PSPHP1O15172 72 aa8.57□□□□□ -1.04
DNMT1-228ENST00000592705 PCOTHQ58A44 107 aa8.57□□□□□ -1.04
DNMT1-228ENST00000592705 TYMSOSQ8TAI1 123 aa8.57□□□□□ -1.04
DNMT1-228ENST00000592705 Q8NBF4 154 aa8.57□□□□□ -1.04
DNMT1-228ENST00000592705 SPACA4Q8TDM5 124 aa8.56□□□□□ -1.04
DNMT1-228ENST00000592705 TM2D3Q9BRN9 247 aa8.56□□□□□ -1.04
DNMT1-228ENST00000592705 PMAIP1Q13794 54 aa8.55□□□□□ -1.04
DNMT1-228ENST00000592705 C1orf64Q8NEQ6 169 aa8.55□□□□□ -1.04
DNMT1-228ENST00000592705 PRO0628Q9UI54 55 aa8.55□□□□□ -1.04
DNMT1-228ENST00000592705 KRTAP1-1Q07627 177 aa8.54□□□□□ -1.04
DNMT1-228ENST00000592705 VPREB1P12018 145 aa8.54□□□□□ -1.04
DNMT1-228ENST00000592705 ZNF575Q86XF7 245 aa8.54□□□□□ -1.04
DNMT1-228ENST00000592705 UTRNP46939 3433 aa8.53□□□□□ -1.04
DNMT1-228ENST00000592705 DNAH10OSP0CZ25 163 aa8.53□□□□□ -1.04
DNMT1-228ENST00000592705 KRTAP10-3P60369 221 aa8.51□□□□□ -1.05
DNMT1-228ENST00000592705 C4orf26Q17RF5 130 aa8.51□□□□□ -1.05
DNMT1-228ENST00000592705 LINC00476Q8WZB0 136 aa8.51□□□□□ -1.05
DNMT1-228ENST00000592705 GIG44P09565 113 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-228ENST00000592705 TP53AIP1Q9HCN2 124 aa8.5□□□□□ -1.05
DNMT1-228ENST00000592705 H3BPC8 53 aa8.49□□□□□ -1.05
DNMT1-228ENST00000592705 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
DNMT1-228ENST00000592705 ERC2-IT1O76042 136 aa8.48□□□□□ -1.05
DNMT1-228ENST00000592705 ST20-AS1Q8NBB2 130 aa8.48□□□□□ -1.05
DNMT1-228ENST00000592705 MOBPQ13875 183 aa8.48□□□□□ -1.05
DNMT1-228ENST00000592705 EPM2AB3EWF7 344 aa8.47□□□□□ -1.05
DNMT1-228ENST00000592705 PHF5AQ7RTV0 110 aaKnown RBP8.47□□□□□ -1.05
DNMT1-228ENST00000592705 PRR34Q9NV39 138 aa8.47□□□□□ -1.05
DNMT1-228ENST00000592705 TRBV7-4A0A0J9YYF1 115 aa8.47□□□□□ -1.05
DNMT1-228ENST00000592705 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.05
DNMT1-228ENST00000592705 SMR3BP02814 79 aaPredicted RBP8.46□□□□□ -1.06
DNMT1-228ENST00000592705 CHD7Q9P2D1 2997 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms