RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 GAFA1Q96PS6 74 aa2.13□□□□□ -2.07
VMP1-212ENST00000591782 KLK9Q9UKQ9 250 aa2.13□□□□□ -2.07
VMP1-212ENST00000591782 LINC01558Q9Y6Z2 57 aa2.13□□□□□ -2.07
VMP1-212ENST00000591782 OBSCNQ5VST9 7968 aa2.13□□□□□ -2.07
VMP1-212ENST00000591782 TEX15Q9BXT5 2789 aa2.12□□□□□ -2.07
VMP1-212ENST00000591782 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.12□□□□□ -2.07
VMP1-212ENST00000591782 UQCR11O14957 56 aa2.12□□□□□ -2.07
VMP1-212ENST00000591782 MRPL33O75394 65 aaKnown RBP2.12□□□□□ -2.07
VMP1-212ENST00000591782 CGB3P0DN86 165 aa2.12□□□□□ -2.07
VMP1-212ENST00000591782 CGB7P0DN87 165 aa2.12□□□□□ -2.07
VMP1-212ENST00000591782 DEFA4P12838 97 aa2.12□□□□□ -2.07
VMP1-212ENST00000591782 KPRPQ5T749 579 aaPredicted RBP2.12□□□□□ -2.07
VMP1-212ENST00000591782 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.12□□□□□ -2.07
VMP1-212ENST00000591782 Q8NDZ9 215 aa2.12□□□□□ -2.07
VMP1-212ENST00000591782 FAM215AQ9Y5M1 114 aa2.12□□□□□ -2.07
VMP1-212ENST00000591782 HELZ2Q9BYK8 2649 aaKnown RBP2.12□□□□□ -2.07
VMP1-212ENST00000591782 FAM186AA6NE01 2351 aa2.12□□□□□ -2.07
VMP1-212ENST00000591782 MYO9AB2RTY4 2548 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 IGLV2-18A0A075B6J9 118 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 IGHV1-18A0A0C4DH31 117 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 LCE6AA0A183 80 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 B4DSR2 109 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 J3QKU1 62 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 NDUFA4O00483 81 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 LHBP01229 141 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 CLPSP04118 112 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 C1orf137Q5JT78 98 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 ZNRD1Q9P1U0 126 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 RIF1Q5UIP0 2472 aaKnown RBP2.11□□□□□ -2.07
VMP1-212ENST00000591782 COL4A2P08572 1712 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 CELSR3Q9NYQ7 3312 aa2.11□□□□□ -2.07
VMP1-212ENST00000591782 CACNA1DQ01668 2161 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 CNOT1A5YKK6 2376 aaKnown RBP2.1□□□□□ -2.07
VMP1-212ENST00000591782 C2CD3Q4AC94 2353 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 FRYLO94915 3013 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 CR1P17927 2039 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 IGLV4-69A0A075B6H9 119 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 IGHV3OR16-8A0A075B7F1 116 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 ETDCA0A1B0GVM5 59 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 LRCOL1A6NCL2 159 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 NDUFA1O15239 70 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 COX17Q14061 63 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 DEFB112Q30KQ8 113 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 LINC00322Q6ZN03 302 aaPredicted RBP2.1□□□□□ -2.07
VMP1-212ENST00000591782 MIR7-3HGQ8N6C7 128 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 C4orf3Q8WVX3 66 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 FREM2Q5SZK8 3169 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 ZFYVE26Q68DK2 2539 aa2.1□□□□□ -2.07
VMP1-212ENST00000591782 HECTD1Q9ULT8 2610 aa2.09□□□□□ -2.07
VMP1-212ENST00000591782 DOCK10Q96BY6 2186 aa2.09□□□□□ -2.07
VMP1-212ENST00000591782 SVILO95425 2214 aa2.09□□□□□ -2.07
VMP1-212ENST00000591782 IGLV3-19P01714 112 aa2.09□□□□□ -2.07
VMP1-212ENST00000591782 RPS27P42677 84 aaKnown RBP2.09□□□□□ -2.07
VMP1-212ENST00000591782 CSAG1Q6PB30 78 aa2.09□□□□□ -2.07
VMP1-212ENST00000591782 LINC00308Q8TCZ7 52 aa2.09□□□□□ -2.07
VMP1-212ENST00000591782 TRIOO75962 3097 aa2.09□□□□□ -2.07
VMP1-212ENST00000591782 ESPL1Q14674 2120 aa2.09□□□□□ -2.08
VMP1-212ENST00000591782 COL12A1Q99715 3063 aa2.09□□□□□ -2.08
VMP1-212ENST00000591782 UBR5O95071 2799 aaPredicted RBP2.08□□□□□ -2.08
VMP1-212ENST00000591782 TENM4Q6N022 2769 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 SDK2Q58EX2 2172 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 DNAJC13O75165 2243 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 IGHV3-64A0A075B6Q5 118 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 TRGV2A0A075B6R0 118 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 NCR3O14931 201 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 IGLV3-1P01715 115 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 IGLV7-43P04211 117 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 CCL18P55774 89 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 PRCDQ00LT1 54 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 PIGYQ3MUY2 71 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 Q8TAT8 98 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 CFAP46Q8IYW2 2715 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 FREM1Q5H8C1 2179 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 MED13Q9UHV7 2174 aa2.08□□□□□ -2.08
VMP1-212ENST00000591782 CACNA1CQ13936 2221 aa2.07□□□□□ -2.08
VMP1-212ENST00000591782 ZNF407Q9C0G0 2248 aa2.07□□□□□ -2.08
VMP1-212ENST00000591782 ZFHX3Q15911 3703 aa2.07□□□□□ -2.08
VMP1-212ENST00000591782 TRGV4A0A0C4DH28 118 aa2.07□□□□□ -2.08
VMP1-212ENST00000591782 A0A1B0GVX0 72 aa2.07□□□□□ -2.08
VMP1-212ENST00000591782 NUPR2A6NF83 97 aa2.07□□□□□ -2.08
VMP1-212ENST00000591782 IGKV1-17P01599 117 aa2.07□□□□□ -2.08
VMP1-212ENST00000591782 LINC00315P59091 139 aa2.07□□□□□ -2.08
VMP1-212ENST00000591782 CNBPP62633 177 aaKnown RBP2.07□□□□□ -2.08
VMP1-212ENST00000591782 ADM2Q7Z4H4 148 aa2.07□□□□□ -2.08
VMP1-212ENST00000591782 Q8NAQ8 132 aa2.07□□□□□ -2.08
VMP1-212ENST00000591782 ZCCHC13Q8WW36 166 aaKnown RBP2.07□□□□□ -2.08
VMP1-212ENST00000591782 ZNF625Q96I27 306 aaPredicted RBP2.07□□□□□ -2.08
VMP1-212ENST00000591782 C20orf166-AS1Q96NR2 134 aa2.07□□□□□ -2.08
VMP1-212ENST00000591782 SHANK1Q9Y566 2161 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 GVINP1Q7Z2Y8 2422 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 ABCA2Q9BZC7 2435 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 IGKV2D-24A0A075B6R9 120 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 A0A1W2PNM2 257 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 C17orf98A8MV24 154 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 ODF3BA8MYP8 253 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 IGHV3-53P01767 116 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 DEFB113Q30KQ7 82 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 LINC00483Q53H64 154 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 HCP5Q6MZN7 132 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms