RNA–Protein interactions for RNA: ENST00000590952.1

LINC01534-203, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 4

Gene LINC01534, Length 550 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-203ENST00000590952 SEC11AP67812 179 aa9.53□□□□□ -0.88
LINC01534-203ENST00000590952 NDUFC2-KCTD14E9PQ53 114 aa9.52□□□□□ -0.89
LINC01534-203ENST00000590952 HERVK_113P63121 156 aa9.52□□□□□ -0.89
LINC01534-203ENST00000590952 ATOH7Q8N100 152 aa9.52□□□□□ -0.89
LINC01534-203ENST00000590952 ZNF861PO60384 105 aa9.5□□□□□ -0.89
LINC01534-203ENST00000590952 C9orf129Q5T035 196 aaKnown RBP9.5□□□□□ -0.89
LINC01534-203ENST00000590952 LINC00518Q8N0U6 118 aa9.49□□□□□ -0.89
LINC01534-203ENST00000590952 LINC01561Q8N1V8 128 aa9.49□□□□□ -0.89
LINC01534-203ENST00000590952 C12orf57Q99622 126 aa9.49□□□□□ -0.89
LINC01534-203ENST00000590952 C2orf82Q6UX34 121 aa9.48□□□□□ -0.89
LINC01534-203ENST00000590952 LINC00469Q8N7U9 141 aa9.48□□□□□ -0.89
LINC01534-203ENST00000590952 VAMP8Q9BV40 100 aa9.48□□□□□ -0.89
LINC01534-203ENST00000590952 GEMIN7Q9H840 131 aaKnown RBP9.48□□□□□ -0.89
LINC01534-203ENST00000590952 CDKN2A-AS1Q9UH64 79 aa9.48□□□□□ -0.89
LINC01534-203ENST00000590952 TMEM223A0PJW6 202 aa9.47□□□□□ -0.89
LINC01534-203ENST00000590952 ANKRD39Q53RE8 183 aa9.47□□□□□ -0.89
LINC01534-203ENST00000590952 KRTAP9-2Q9BYQ4 174 aa9.47□□□□□ -0.89
LINC01534-203ENST00000590952 SMIM1B2RUZ4 78 aa9.46□□□□□ -0.9
LINC01534-203ENST00000590952 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.9
LINC01534-203ENST00000590952 E9PLD3 99 aa9.45□□□□□ -0.9
LINC01534-203ENST00000590952 H3BRM9 83 aa9.45□□□□□ -0.9
LINC01534-203ENST00000590952 LBHQ53QV2 105 aaPredicted RBP9.45□□□□□ -0.9
LINC01534-203ENST00000590952 PAM16Q9Y3D7 125 aa9.45□□□□□ -0.9
LINC01534-203ENST00000590952 IGLV5-39A0A0G2JS06 123 aa9.44□□□□□ -0.9
LINC01534-203ENST00000590952 HSBP1L1C9JCN9 74 aa9.44□□□□□ -0.9
LINC01534-203ENST00000590952 TSPAN13O95857 204 aa9.44□□□□□ -0.9
LINC01534-203ENST00000590952 HERVK_113P61574 105 aa9.44□□□□□ -0.9
LINC01534-203ENST00000590952 S100A12P80511 92 aa9.44□□□□□ -0.9
LINC01534-203ENST00000590952 SPATA45Q537H7 98 aa9.44□□□□□ -0.9
LINC01534-203ENST00000590952 C22orf24Q9Y442 160 aa9.44□□□□□ -0.9
LINC01534-203ENST00000590952 IGKV2D-26A0A0A0MRZ7 120 aa9.43□□□□□ -0.9
LINC01534-203ENST00000590952 PRSS2P07478 247 aa9.43□□□□□ -0.9
LINC01534-203ENST00000590952 SPINK8P0C7L1 97 aa9.42□□□□□ -0.9
LINC01534-203ENST00000590952 TSPEAR-AS2P59090 65 aa9.42□□□□□ -0.9
LINC01534-203ENST00000590952 CKS1BP61024 79 aa9.42□□□□□ -0.9
LINC01534-203ENST00000590952 C6orf226Q5I0X4 101 aa9.42□□□□□ -0.9
LINC01534-203ENST00000590952 TP73-AS1Q9UF72 201 aa9.41□□□□□ -0.9
LINC01534-203ENST00000590952 LEPROTO15243 131 aa9.4□□□□□ -0.9
LINC01534-203ENST00000590952 CRYGAP11844 174 aa9.4□□□□□ -0.9
LINC01534-203ENST00000590952 RPL28P46779 137 aaKnown RBP9.4□□□□□ -0.9
LINC01534-203ENST00000590952 Q8IZM0 81 aa9.4□□□□□ -0.9
LINC01534-203ENST00000590952 FAT4Q6V0I7 4981 aa9.4□□□□□ -0.91
LINC01534-203ENST00000590952 A0A087X002 238 aa9.39□□□□□ -0.91
LINC01534-203ENST00000590952 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
LINC01534-203ENST00000590952 TYMSOSQ8TAI1 123 aa9.39□□□□□ -0.91
LINC01534-203ENST00000590952 TOMM7Q9P0U1 55 aa9.39□□□□□ -0.91
LINC01534-203ENST00000590952 J3QQQ9 107 aa9.38□□□□□ -0.91
LINC01534-203ENST00000590952 BCE1O60756 84 aa9.38□□□□□ -0.91
LINC01534-203ENST00000590952 NMUP48645 174 aa9.38□□□□□ -0.91
LINC01534-203ENST00000590952 MRPL55Q7Z7F7 128 aaKnown RBP9.38□□□□□ -0.91
LINC01534-203ENST00000590952 PLEKHB2Q96CS7 222 aa9.38□□□□□ -0.91
LINC01534-203ENST00000590952 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
LINC01534-203ENST00000590952 COX8AP10176 69 aa9.37□□□□□ -0.91
LINC01534-203ENST00000590952 PCP2Q8IVA1 136 aa9.36□□□□□ -0.91
LINC01534-203ENST00000590952 BOD1L2Q8IYS8 172 aa9.36□□□□□ -0.91
LINC01534-203ENST00000590952 TTTY13Q9BZ97 58 aa9.36□□□□□ -0.91
LINC01534-203ENST00000590952 DLEU1O43261 78 aa9.35□□□□□ -0.91
LINC01534-203ENST00000590952 COX7B2Q8TF08 81 aa9.35□□□□□ -0.91
LINC01534-203ENST00000590952 LGALS3P17931 250 aaKnown RBP9.34□□□□□ -0.91
LINC01534-203ENST00000590952 ZNF625Q96I27 306 aaPredicted RBP9.34□□□□□ -0.91
LINC01534-203ENST00000590952 TSTD3H0UI37 97 aa9.33□□□□□ -0.92
LINC01534-203ENST00000590952 CXCL5P42830 114 aa9.33□□□□□ -0.92
LINC01534-203ENST00000590952 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
LINC01534-203ENST00000590952 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
LINC01534-203ENST00000590952 SLC25A34Q6PIV7 304 aa9.32□□□□□ -0.92
LINC01534-203ENST00000590952 SFTA2Q6UW10 78 aa9.32□□□□□ -0.92
LINC01534-203ENST00000590952 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
LINC01534-203ENST00000590952 PRO1933Q9H354 126 aa9.32□□□□□ -0.92
LINC01534-203ENST00000590952 UQCR10Q9UDW1 63 aa9.32□□□□□ -0.92
LINC01534-203ENST00000590952 NDUFA12Q9UI09 145 aa9.32□□□□□ -0.92
LINC01534-203ENST00000590952 MYMXA0A1B0GTQ4 84 aa9.31□□□□□ -0.92
LINC01534-203ENST00000590952 C2orf91Q6ZV80 131 aa9.31□□□□□ -0.92
LINC01534-203ENST00000590952 RPL37AP8A6NKH3 93 aa9.3□□□□□ -0.92
LINC01534-203ENST00000590952 FAM229BQ4G0N7 80 aa9.3□□□□□ -0.92
LINC01534-203ENST00000590952 KRTAP13-2Q52LG2 175 aa9.3□□□□□ -0.92
LINC01534-203ENST00000590952 ANAPC11Q9NYG5 84 aa9.3□□□□□ -0.92
LINC01534-203ENST00000590952 CTAG1AP78358 180 aa9.29□□□□□ -0.92
LINC01534-203ENST00000590952 MIEN1Q9BRT3 115 aa9.29□□□□□ -0.92
LINC01534-203ENST00000590952 HERV-K104P63124 156 aa9.28□□□□□ -0.92
LINC01534-203ENST00000590952 TPRXLQ17RH7 258 aa9.28□□□□□ -0.92
LINC01534-203ENST00000590952 KRTAP13-1Q8IUC0 172 aa9.28□□□□□ -0.92
LINC01534-203ENST00000590952 HIGD1BQ9P298 99 aa9.28□□□□□ -0.92
LINC01534-203ENST00000590952 IGLV5-37A0A075B6J1 123 aa9.27□□□□□ -0.93
LINC01534-203ENST00000590952 A0A0J9YXY3 114 aa9.27□□□□□ -0.93
LINC01534-203ENST00000590952 UBE2AP49459 152 aa9.27□□□□□ -0.93
LINC01534-203ENST00000590952 LINC00304Q8N9R0 145 aa9.27□□□□□ -0.93
LINC01534-203ENST00000590952 CDIP1Q9H305 208 aa9.27□□□□□ -0.93
LINC01534-203ENST00000590952 KRTAP9-6A0A140TA67 174 aa9.26□□□□□ -0.93
LINC01534-203ENST00000590952 LITAFQ99732 161 aa9.26□□□□□ -0.93
LINC01534-203ENST00000590952 RETNLBQ9BQ08 111 aa9.26□□□□□ -0.93
LINC01534-203ENST00000590952 GAGE10A6NGK3 116 aa9.25□□□□□ -0.93
LINC01534-203ENST00000590952 TIMM17BO60830 172 aa9.25□□□□□ -0.93
LINC01534-203ENST00000590952 NKAPP1Q8N9T2 125 aa9.25□□□□□ -0.93
LINC01534-203ENST00000590952 DDTP30046 118 aa9.24□□□□□ -0.93
LINC01534-203ENST00000590952 SCGB1D4Q6XE38 83 aa9.24□□□□□ -0.93
LINC01534-203ENST00000590952 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
LINC01534-203ENST00000590952 MUC17Q685J3 4493 aa9.24□□□□□ -0.93
LINC01534-203ENST00000590952 IGLV7-46A0A075B6I9 117 aa9.23□□□□□ -0.93
LINC01534-203ENST00000590952 TMEM238C9JI98 176 aa9.23□□□□□ -0.93
LINC01534-203ENST00000590952 SPANXDQ9BXN6 97 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms