RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 HIST3H2BBQ8N257 126 aa5.01□□□□□ -1.61
TPM4-211ENST00000589897 LINC00167Q96N53 147 aa5.01□□□□□ -1.61
TPM4-211ENST00000589897 BCE1O60756 84 aa5□□□□□ -1.61
TPM4-211ENST00000589897 ZNF22P17026 224 aaPredicted RBP5□□□□□ -1.61
TPM4-211ENST00000589897 UBE2AP49459 152 aa5□□□□□ -1.61
TPM4-211ENST00000589897 SFTA2Q6UW10 78 aa5□□□□□ -1.61
TPM4-211ENST00000589897 A0A096LNJ9 63 aa4.99□□□□□ -1.61
TPM4-211ENST00000589897 SMIM6P0DI80 62 aa4.99□□□□□ -1.61
TPM4-211ENST00000589897 RPL24P83731 157 aaKnown RBP4.99□□□□□ -1.61
TPM4-211ENST00000589897 COX17Q14061 63 aa4.99□□□□□ -1.61
TPM4-211ENST00000589897 LCE2AQ5TA79 106 aaPredicted RBP4.99□□□□□ -1.61
TPM4-211ENST00000589897 URB1-AS1Q96HZ7 61 aa4.99□□□□□ -1.61
TPM4-211ENST00000589897 ZNF625Q96I27 306 aaPredicted RBP4.99□□□□□ -1.61
TPM4-211ENST00000589897 C12orf57Q99622 126 aa4.99□□□□□ -1.61
TPM4-211ENST00000589897 ERG28Q9UKR5 140 aa4.99□□□□□ -1.61
TPM4-211ENST00000589897 CHTOPQ9Y3Y2 248 aaKnown RBP4.99□□□□□ -1.61
TPM4-211ENST00000589897 IGKV2-28A0A075B6P5 120 aa4.98□□□□□ -1.61
TPM4-211ENST00000589897 IGLV5-39A0A0G2JS06 123 aa4.98□□□□□ -1.61
TPM4-211ENST00000589897 C11orf86A6NJI1 115 aa4.98□□□□□ -1.61
TPM4-211ENST00000589897 IGKV2D-28P01615 120 aa4.98□□□□□ -1.61
TPM4-211ENST00000589897 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
TPM4-211ENST00000589897 S100A2P29034 98 aa4.98□□□□□ -1.61
TPM4-211ENST00000589897 CHCHD1Q96BP2 118 aaKnown RBP4.98□□□□□ -1.61
TPM4-211ENST00000589897 IGLV5-37A0A075B6J1 123 aa4.97□□□□□ -1.61
TPM4-211ENST00000589897 HSBP1O75506 76 aa4.97□□□□□ -1.61
TPM4-211ENST00000589897 LINC00158P58513 81 aa4.97□□□□□ -1.61
TPM4-211ENST00000589897 IFI27L1Q96BM0 104 aa4.97□□□□□ -1.61
TPM4-211ENST00000589897 HIST1H2BLQ99880 126 aa4.97□□□□□ -1.61
TPM4-211ENST00000589897 SND1-IT1Q9HBX3 110 aa4.97□□□□□ -1.61
TPM4-211ENST00000589897 CRYGAP11844 174 aa4.96□□□□□ -1.62
TPM4-211ENST00000589897 FABP4P15090 132 aa4.96□□□□□ -1.62
TPM4-211ENST00000589897 PRR4Q16378 134 aa4.96□□□□□ -1.62
TPM4-211ENST00000589897 TRAV12-1A0A0B4J245 112 aa4.95□□□□□ -1.62
TPM4-211ENST00000589897 A0A0U1RRA0 63 aa4.95□□□□□ -1.62
TPM4-211ENST00000589897 H0Y8G0 127 aa4.95□□□□□ -1.62
TPM4-211ENST00000589897 PYY3Q5JQD4 70 aa4.95□□□□□ -1.62
TPM4-211ENST00000589897 MEIG1Q5JSS6 88 aa4.95□□□□□ -1.62
TPM4-211ENST00000589897 FAM19A1Q7Z5A9 133 aa4.95□□□□□ -1.62
TPM4-211ENST00000589897 TYMSOSQ8TAI1 123 aa4.95□□□□□ -1.62
TPM4-211ENST00000589897 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
TPM4-211ENST00000589897 TMEM223A0PJW6 202 aa4.94□□□□□ -1.62
TPM4-211ENST00000589897 TSPAN13O95857 204 aa4.94□□□□□ -1.62
TPM4-211ENST00000589897 VPREB1P12018 145 aa4.94□□□□□ -1.62
TPM4-211ENST00000589897 LINC00310P59036 64 aa4.94□□□□□ -1.62
TPM4-211ENST00000589897 FAM19A2Q8N3H0 131 aa4.94□□□□□ -1.62
TPM4-211ENST00000589897 LINC00587B1AMM8 73 aa4.93□□□□□ -1.62
TPM4-211ENST00000589897 SERF1AO75920 110 aa4.93□□□□□ -1.62
TPM4-211ENST00000589897 PRLHP81277 87 aa4.93□□□□□ -1.62
TPM4-211ENST00000589897 TMEM126AQ9H061 195 aa4.93□□□□□ -1.62
TPM4-211ENST00000589897 A0A087X002 238 aa4.92□□□□□ -1.62
TPM4-211ENST00000589897 IGKV2D-26A0A0A0MRZ7 120 aa4.92□□□□□ -1.62
TPM4-211ENST00000589897 PCP4L1A6NKN8 68 aa4.92□□□□□ -1.62
TPM4-211ENST00000589897 TMEM238C9JI98 176 aa4.92□□□□□ -1.62
TPM4-211ENST00000589897 LEPROTL1O95214 131 aa4.92□□□□□ -1.62
TPM4-211ENST00000589897 SMIM13P0DJ93 91 aa4.92□□□□□ -1.62
TPM4-211ENST00000589897 HERV-K104P63124 156 aa4.92□□□□□ -1.62
TPM4-211ENST00000589897 JOSD1Q15040 202 aaPredicted RBP4.92□□□□□ -1.62
TPM4-211ENST00000589897 MAP1LC3CQ9BXW4 147 aa4.92□□□□□ -1.62
TPM4-211ENST00000589897 ANAPC11Q9NYG5 84 aa4.92□□□□□ -1.62
TPM4-211ENST00000589897 FAT4Q6V0I7 4981 aa4.91□□□□□ -1.62
TPM4-211ENST00000589897 MYMXA0A1B0GTQ4 84 aa4.91□□□□□ -1.62
TPM4-211ENST00000589897 M0R378 163 aa4.91□□□□□ -1.62
TPM4-211ENST00000589897 LCE2BO14633 110 aa4.91□□□□□ -1.62
TPM4-211ENST00000589897 S100A12P80511 92 aa4.91□□□□□ -1.62
TPM4-211ENST00000589897 BOD1L2Q8IYS8 172 aa4.91□□□□□ -1.62
TPM4-211ENST00000589897 HIGD2AQ9BW72 106 aa4.91□□□□□ -1.62
TPM4-211ENST00000589897 NDUFA12Q9UI09 145 aa4.91□□□□□ -1.62
TPM4-211ENST00000589897 HSPB8Q9UJY1 196 aa4.91□□□□□ -1.62
TPM4-211ENST00000589897 PLNP26678 52 aa4.9□□□□□ -1.63
TPM4-211ENST00000589897 SMCPP49901 116 aaPredicted RBP4.9□□□□□ -1.63
TPM4-211ENST00000589897 HERVK_113P61574 105 aa4.9□□□□□ -1.63
TPM4-211ENST00000589897 FAM229BQ4G0N7 80 aa4.9□□□□□ -1.63
TPM4-211ENST00000589897 KRTAP13-1Q8IUC0 172 aa4.9□□□□□ -1.63
TPM4-211ENST00000589897 MIR7-3HGQ8N6C7 128 aa4.9□□□□□ -1.63
TPM4-211ENST00000589897 NCR3O14931 201 aa4.89□□□□□ -1.63
TPM4-211ENST00000589897 PLEKHB2Q96CS7 222 aa4.89□□□□□ -1.63
TPM4-211ENST00000589897 MUC2Q02817 5179 aa4.89□□□□□ -1.63
TPM4-211ENST00000589897 ETDCA0A1B0GVM5 59 aa4.88□□□□□ -1.63
TPM4-211ENST00000589897 LEPROTO15243 131 aa4.88□□□□□ -1.63
TPM4-211ENST00000589897 DPM2O94777 84 aa4.88□□□□□ -1.63
TPM4-211ENST00000589897 LGALS3P17931 250 aaKnown RBP4.88□□□□□ -1.63
TPM4-211ENST00000589897 LINC00304Q8N9R0 145 aa4.88□□□□□ -1.63
TPM4-211ENST00000589897 Q8NDZ9 215 aa4.88□□□□□ -1.63
TPM4-211ENST00000589897 MIEN1Q9BRT3 115 aa4.88□□□□□ -1.63
TPM4-211ENST00000589897 ZNF706Q9Y5V0 76 aaPredicted RBP4.88□□□□□ -1.63
TPM4-211ENST00000589897 PRYO14603 147 aa4.87□□□□□ -1.63
TPM4-211ENST00000589897 J3QQQ9 107 aa4.86□□□□□ -1.63
TPM4-211ENST00000589897 SCGB1D1O95968 90 aa4.86□□□□□ -1.63
TPM4-211ENST00000589897 IGKCP01834 107 aa4.86□□□□□ -1.63
TPM4-211ENST00000589897 NMUP48645 174 aa4.86□□□□□ -1.63
TPM4-211ENST00000589897 KRTAP13-2Q52LG2 175 aa4.86□□□□□ -1.63
TPM4-211ENST00000589897 PMCHL2Q9BQD1 86 aa4.86□□□□□ -1.63
TPM4-211ENST00000589897 LPAP08519 4548 aa4.86□□□□□ -1.63
TPM4-211ENST00000589897 TRBV10-3A0A0K0K1G6 114 aa4.85□□□□□ -1.63
TPM4-211ENST00000589897 C3orf79P0CE67 100 aa4.85□□□□□ -1.63
TPM4-211ENST00000589897 DAND5Q8N907 189 aa4.85□□□□□ -1.63
TPM4-211ENST00000589897 TSTD3H0UI37 97 aa4.84□□□□□ -1.63
TPM4-211ENST00000589897 DDTP30046 118 aa4.84□□□□□ -1.63
TPM4-211ENST00000589897 TSPEAR-AS2P59090 65 aa4.84□□□□□ -1.63
TPM4-211ENST00000589897 KRTDAPP60985 99 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms