RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 TMEM256-PLSCR3K7ERE1 68 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 LECT2O14960 151 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 LY6G6DO95868 133 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 CCKP06307 115 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 MSMBP08118 114 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 ATP5EP56381 51 aaPredicted RBP2.37□□□□□ -2.03
LINC01539-203ENST00000589447 LINC00158P58513 81 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 BLCAPP62952 87 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 KRTAP1-1Q07627 177 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 C4orf26Q17RF5 130 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 NOTCH2NLQ7Z3S9 236 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 TMEM86BQ8N661 226 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 MIR7-3HGQ8N6C7 128 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 LINC00337Q8N6G1 96 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.37□□□□□ -2.03
LINC01539-203ENST00000589447 WFDC11Q8NEX6 87 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 C11orf45Q8TAV5 145 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 SMIM11BQ8TCY0 68 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 C10orf105Q8TEF2 133 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 DYNLRB2Q8TF09 96 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 UBL5Q9BZL1 73 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 CDC42SE2Q9NRR3 84 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 LINC00846Q9NV44 126 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 C22orf24Q9Y442 160 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 IGLV5-37A0A075B6J1 123 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 IGKV2-28A0A075B6P5 120 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 TRGV1A0A0A0MS02 117 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 A0A0U1RQV1 116 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 TRBV6-4A0A1B0GX49 114 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 IGKV2D-28P01615 120 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 PFN2P35080 140 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 CMC4P56277 68 aaPredicted RBP2.36□□□□□ -2.03
LINC01539-203ENST00000589447 DSCR9P59020 149 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 KRTAP21-3Q3LHN1 58 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 Q6YL49 198 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 C1orf158Q8N1D5 194 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 LINC00167Q96N53 147 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 DSCR8Q96T75 97 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 CCL19Q99731 98 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 KRTAP9-3Q9BYQ3 159 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 TOMM7Q9P0U1 55 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 SERP1Q9Y6X1 66 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 NOTCH1P46531 2555 aa2.36□□□□□ -2.03
LINC01539-203ENST00000589447 TRAV7A0A075B6U4 112 aa2.35□□□□□ -2.03
LINC01539-203ENST00000589447 A0A087WVE0 104 aa2.35□□□□□ -2.03
LINC01539-203ENST00000589447 B4DSR2 109 aa2.35□□□□□ -2.03
LINC01539-203ENST00000589447 NCR3O14931 201 aa2.35□□□□□ -2.03
LINC01539-203ENST00000589447 NDUFC1O43677 76 aa2.35□□□□□ -2.03
LINC01539-203ENST00000589447 CCL18P55774 89 aa2.35□□□□□ -2.03
LINC01539-203ENST00000589447 FHL2Q14192 279 aa2.35□□□□□ -2.03
LINC01539-203ENST00000589447 LYPD5Q6UWN5 251 aa2.35□□□□□ -2.03
LINC01539-203ENST00000589447 HRCT1Q6UXD1 115 aa2.35□□□□□ -2.03
LINC01539-203ENST00000589447 C16orf74Q96GX8 76 aa2.35□□□□□ -2.03
LINC01539-203ENST00000589447 WWC2-AS2Q96NR7 200 aa2.35□□□□□ -2.03
LINC01539-203ENST00000589447 TRAV23DV6A0A075B6W5 121 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 LOC110117498A0A087WWA1 95 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 TRGV4A0A0C4DH28 118 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 INAFM1C9JVW0 142 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 PDE6GP18545 87 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 XCL1P47992 114 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 KLKP1Q107X0 134 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 COX17Q14061 63 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 SS18Q15532 418 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 DEFB112Q30KQ8 113 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 Q5XG85 94 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 ENHOQ6UWT2 76 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 NTM-AS1Q6ZSK4 140 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 Q8IZM0 81 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 C20orf197Q8N268 126 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 Q8N814 137 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 MUC7Q8TAX7 377 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 C4orf3Q8WVX3 66 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 CYSTM1Q9H1C7 97 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 XCL2Q9UBD3 114 aa2.34□□□□□ -2.03
LINC01539-203ENST00000589447 PRKDCP78527 4128 aaKnown RBP2.33□□□□□ -2.04
LINC01539-203ENST00000589447 TRGV2A0A075B6R0 118 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 IGHV4-30-2A0A087WSY4 118 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 SMIM26A0A096LP01 95 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 IGHV3OR16-9A0A0B4J2B5 98 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 IGKV3OR2-268A0A0C4DH90 116 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 SLPIP03973 132 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 CXCL6P80162 114 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 RBM3P98179 157 aaKnown RBP2.33□□□□□ -2.04
LINC01539-203ENST00000589447 C9orf129Q5T035 196 aaKnown RBP2.33□□□□□ -2.04
LINC01539-203ENST00000589447 C10orf25Q5T742 122 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 C1orf195Q5TG92 126 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 C10orf99Q6UWK7 81 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 MAPK1IP1LQ8NDC0 245 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 ZNF702PQ9H963 129 aa2.33□□□□□ -2.04
LINC01539-203ENST00000589447 TRBV6-8A0A0A6YYG3 113 aa2.32□□□□□ -2.04
LINC01539-203ENST00000589447 EPM2AB3EWF7 344 aa2.32□□□□□ -2.04
LINC01539-203ENST00000589447 PRM2P04554 102 aa2.32□□□□□ -2.04
LINC01539-203ENST00000589447 APOC4P55056 127 aa2.32□□□□□ -2.04
LINC01539-203ENST00000589447 DEFB114Q30KQ6 69 aa2.32□□□□□ -2.04
LINC01539-203ENST00000589447 Q6ZQT0 140 aa2.32□□□□□ -2.04
LINC01539-203ENST00000589447 Q6ZTI0 123 aa2.32□□□□□ -2.04
LINC01539-203ENST00000589447 MRPL55Q7Z7F7 128 aaKnown RBP2.32□□□□□ -2.04
LINC01539-203ENST00000589447 C6orf223Q8N319 242 aa2.32□□□□□ -2.04
LINC01539-203ENST00000589447 LAMTOR3Q9UHA4 124 aa2.32□□□□□ -2.04
LINC01539-203ENST00000589447 WNK1Q9H4A3 2382 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms