RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 SND1-IT1Q9HBX3 110 aa6.38□□□□□ -1.39
CLPTM1-211ENST00000589347 MUC2Q02817 5179 aa6.37□□□□□ -1.39
CLPTM1-211ENST00000589347 IGKV2-28A0A075B6P5 120 aa6.37□□□□□ -1.39
CLPTM1-211ENST00000589347 LINC00587B1AMM8 73 aa6.37□□□□□ -1.39
CLPTM1-211ENST00000589347 IGKV2D-28P01615 120 aa6.37□□□□□ -1.39
CLPTM1-211ENST00000589347 KRTAP1-4P0C5Y4 121 aa6.37□□□□□ -1.39
CLPTM1-211ENST00000589347 LINC00158P58513 81 aa6.37□□□□□ -1.39
CLPTM1-211ENST00000589347 HERV-K104P63124 156 aa6.37□□□□□ -1.39
CLPTM1-211ENST00000589347 FAM19A2Q8N3H0 131 aa6.37□□□□□ -1.39
CLPTM1-211ENST00000589347 HSPB8Q9UJY1 196 aa6.37□□□□□ -1.39
CLPTM1-211ENST00000589347 LPAP08519 4548 aa6.37□□□□□ -1.39
CLPTM1-211ENST00000589347 SERF1AO75920 110 aa6.36□□□□□ -1.39
CLPTM1-211ENST00000589347 VPREB1P12018 145 aa6.36□□□□□ -1.39
CLPTM1-211ENST00000589347 PLNP26678 52 aa6.36□□□□□ -1.39
CLPTM1-211ENST00000589347 HERVK_113P61574 105 aa6.36□□□□□ -1.39
CLPTM1-211ENST00000589347 S100A12P80511 92 aa6.35□□□□□ -1.39
CLPTM1-211ENST00000589347 MAP1LC3CQ9BXW4 147 aa6.35□□□□□ -1.39
CLPTM1-211ENST00000589347 TMA7Q9Y2S6 64 aaKnown RBP6.35□□□□□ -1.39
CLPTM1-211ENST00000589347 MYMXA0A1B0GTQ4 84 aa6.34□□□□□ -1.39
CLPTM1-211ENST00000589347 SCO1O75880 301 aa6.33□□□□□ -1.4
CLPTM1-211ENST00000589347 CRYGAP11844 174 aa6.33□□□□□ -1.4
CLPTM1-211ENST00000589347 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
CLPTM1-211ENST00000589347 PLEKHB2Q96CS7 222 aa6.33□□□□□ -1.4
CLPTM1-211ENST00000589347 TMEM126AQ9H061 195 aa6.33□□□□□ -1.4
CLPTM1-211ENST00000589347 NDUFA12Q9UI09 145 aa6.33□□□□□ -1.4
CLPTM1-211ENST00000589347 A0A0U1RRA0 63 aa6.32□□□□□ -1.4
CLPTM1-211ENST00000589347 DPM2O94777 84 aa6.32□□□□□ -1.4
CLPTM1-211ENST00000589347 S100A6P06703 90 aa6.32□□□□□ -1.4
CLPTM1-211ENST00000589347 SMIM13P0DJ93 91 aa6.32□□□□□ -1.4
CLPTM1-211ENST00000589347 KRTAP13-1Q8IUC0 172 aa6.32□□□□□ -1.4
CLPTM1-211ENST00000589347 M0R378 163 aa6.31□□□□□ -1.4
CLPTM1-211ENST00000589347 PRYO14603 147 aa6.31□□□□□ -1.4
CLPTM1-211ENST00000589347 LEPROTO15243 131 aa6.31□□□□□ -1.4
CLPTM1-211ENST00000589347 NMUP48645 174 aa6.31□□□□□ -1.4
CLPTM1-211ENST00000589347 BOD1L2Q8IYS8 172 aa6.31□□□□□ -1.4
CLPTM1-211ENST00000589347 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
CLPTM1-211ENST00000589347 TYMSOSQ8TAI1 123 aa6.31□□□□□ -1.4
CLPTM1-211ENST00000589347 IGKV2D-26A0A0A0MRZ7 120 aa6.3□□□□□ -1.4
CLPTM1-211ENST00000589347 COLCA2A8K830 154 aa6.3□□□□□ -1.4
CLPTM1-211ENST00000589347 TMEM238C9JI98 176 aa6.3□□□□□ -1.4
CLPTM1-211ENST00000589347 IGKCP01834 107 aa6.3□□□□□ -1.4
CLPTM1-211ENST00000589347 FABP4P15090 132 aa6.3□□□□□ -1.4
CLPTM1-211ENST00000589347 LGALS3P17931 250 aaKnown RBP6.3□□□□□ -1.4
CLPTM1-211ENST00000589347 LINC00310P59036 64 aa6.3□□□□□ -1.4
CLPTM1-211ENST00000589347 PRLHP81277 87 aa6.3□□□□□ -1.4
CLPTM1-211ENST00000589347 FAM229BQ4G0N7 80 aa6.3□□□□□ -1.4
CLPTM1-211ENST00000589347 MIEN1Q9BRT3 115 aa6.3□□□□□ -1.4
CLPTM1-211ENST00000589347 NCR3O14931 201 aa6.29□□□□□ -1.4
CLPTM1-211ENST00000589347 J3QQQ9 107 aa6.28□□□□□ -1.4
CLPTM1-211ENST00000589347 LCE2AQ5TA79 106 aaPredicted RBP6.28□□□□□ -1.4
CLPTM1-211ENST00000589347 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
CLPTM1-211ENST00000589347 A0A087X002 238 aa6.27□□□□□ -1.41
CLPTM1-211ENST00000589347 TSPEAR-AS2P59090 65 aa6.27□□□□□ -1.41
CLPTM1-211ENST00000589347 Q8NDZ9 215 aa6.27□□□□□ -1.41
CLPTM1-211ENST00000589347 HIGD2AQ9BW72 106 aa6.27□□□□□ -1.41
CLPTM1-211ENST00000589347 ETDCA0A1B0GVM5 59 aa6.26□□□□□ -1.41
CLPTM1-211ENST00000589347 PRR4Q16378 134 aa6.26□□□□□ -1.41
CLPTM1-211ENST00000589347 PMCHL2Q9BQD1 86 aa6.26□□□□□ -1.41
CLPTM1-211ENST00000589347 HIST1H2BKO60814 126 aa6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 HIST1H2BJP06899 126 aa6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 HIST1H2BOP23527 126 aa6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 HIST1H2BBP33778 126 aa6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 HIST1H2BDP58876 126 aa6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 HIST1H2BCP62807 126 aa6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 HIST2H2BEQ16778 126 aa6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 LINC00337Q8N6G1 96 aa6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 HIST1H2BHQ93079 126 aa6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 HIST1H2BNQ99877 126 aa6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 HIST1H2BMQ99879 126 aa6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 SPANXB1Q9NS25 103 aaPredicted RBP6.25□□□□□ -1.41
CLPTM1-211ENST00000589347 LINC00304Q8N9R0 145 aa6.24□□□□□ -1.41
CLPTM1-211ENST00000589347 TRBV10-3A0A0K0K1G6 114 aa6.23□□□□□ -1.41
CLPTM1-211ENST00000589347 TRBV10-2A0A0K0K1G8 114 aa6.23□□□□□ -1.41
CLPTM1-211ENST00000589347 A0A0U1RQV1 116 aa6.23□□□□□ -1.41
CLPTM1-211ENST00000589347 E9PLD3 99 aa6.23□□□□□ -1.41
CLPTM1-211ENST00000589347 SYS1-DBNDD2H3BUS1 97 aa6.23□□□□□ -1.41
CLPTM1-211ENST00000589347 TSPAN13O95857 204 aa6.23□□□□□ -1.41
CLPTM1-211ENST00000589347 DAND5Q8N907 189 aa6.23□□□□□ -1.41
CLPTM1-211ENST00000589347 KCNQ1DNQ9H478 68 aa6.23□□□□□ -1.41
CLPTM1-211ENST00000589347 ANAPC11Q9NYG5 84 aa6.23□□□□□ -1.41
CLPTM1-211ENST00000589347 CBY1Q9Y3M2 126 aa6.23□□□□□ -1.41
CLPTM1-211ENST00000589347 LOC107984156A0A0G2JMH3 177 aa6.22□□□□□ -1.41
CLPTM1-211ENST00000589347 NDUFC2O95298 119 aa6.22□□□□□ -1.41
CLPTM1-211ENST00000589347 DDTP30046 118 aa6.22□□□□□ -1.41
CLPTM1-211ENST00000589347 SPRR1AP35321 89 aa6.22□□□□□ -1.41
CLPTM1-211ENST00000589347 KRTAP13-2Q52LG2 175 aa6.22□□□□□ -1.41
CLPTM1-211ENST00000589347 S100A7L2Q5SY68 101 aa6.22□□□□□ -1.41
CLPTM1-211ENST00000589347 PET117Q6UWS5 81 aa6.22□□□□□ -1.41
CLPTM1-211ENST00000589347 ARL17AQ8IVW1 177 aa6.22□□□□□ -1.41
CLPTM1-211ENST00000589347 SPRR4Q96PI1 79 aa6.22□□□□□ -1.41
CLPTM1-211ENST00000589347 A0A0J9YXY3 114 aa6.2□□□□□ -1.42
CLPTM1-211ENST00000589347 C20orf202A1L168 122 aa6.2□□□□□ -1.42
CLPTM1-211ENST00000589347 LINC01545Q5VT33 79 aa6.2□□□□□ -1.42
CLPTM1-211ENST00000589347 LINC00518Q8N0U6 118 aa6.2□□□□□ -1.42
CLPTM1-211ENST00000589347 JOSD1Q15040 202 aaPredicted RBP6.19□□□□□ -1.42
CLPTM1-211ENST00000589347 TRAV23DV6A0A075B6W5 121 aa6.18□□□□□ -1.42
CLPTM1-211ENST00000589347 ZNF815PA8K554 130 aa6.18□□□□□ -1.42
CLPTM1-211ENST00000589347 TIMM17BO60830 172 aa6.18□□□□□ -1.42
CLPTM1-211ENST00000589347 AKR1D1P51857 326 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms