RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 PRR26Q8N8Z3 221 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 NKAPP1Q8N9T2 125 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 HIST1H2BHQ93079 126 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 LINC00167Q96N53 147 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 HIST1H2BNQ99877 126 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 HIST1H2BMQ99879 126 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 ERG28Q9UKR5 140 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 UBR4Q5T4S7 5183 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 BCE1O60756 84 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 IFI27L1Q96BM0 104 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 S100A2P29034 98 aa8.69□□□□□ -1.02
DDX39A-208ENST00000588692 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
DDX39A-208ENST00000588692 HSBP1O75506 76 aa8.68□□□□□ -1.02
DDX39A-208ENST00000588692 RPL13AP40429 203 aaKnown RBP8.68□□□□□ -1.02
DDX39A-208ENST00000588692 RPL37AP8A6NKH3 93 aa8.67□□□□□ -1.02
DDX39A-208ENST00000588692 ZNF625Q96I27 306 aaPredicted RBP8.67□□□□□ -1.02
DDX39A-208ENST00000588692 SND1-IT1Q9HBX3 110 aa8.67□□□□□ -1.02
DDX39A-208ENST00000588692 TMEM223A0PJW6 202 aa8.66□□□□□ -1.02
DDX39A-208ENST00000588692 GAGE10A6NGK3 116 aa8.66□□□□□ -1.02
DDX39A-208ENST00000588692 CBY1Q9Y3M2 126 aa8.66□□□□□ -1.02
DDX39A-208ENST00000588692 RPL24P83731 157 aaKnown RBP8.65□□□□□ -1.02
DDX39A-208ENST00000588692 PCP4L1A6NKN8 68 aa8.64□□□□□ -1.03
DDX39A-208ENST00000588692 VPREB1P12018 145 aa8.64□□□□□ -1.03
DDX39A-208ENST00000588692 HIST3H2BBQ8N257 126 aa8.64□□□□□ -1.03
DDX39A-208ENST00000588692 FAM19A2Q8N3H0 131 aa8.64□□□□□ -1.03
DDX39A-208ENST00000588692 COA6Q5JTJ3 125 aaKnown RBP8.63□□□□□ -1.03
DDX39A-208ENST00000588692 LRP2P98164 4655 aa8.62□□□□□ -1.03
DDX39A-208ENST00000588692 IGKV2-28A0A075B6P5 120 aa8.62□□□□□ -1.03
DDX39A-208ENST00000588692 IGKV2D-28P01615 120 aa8.62□□□□□ -1.03
DDX39A-208ENST00000588692 UBE2AP49459 152 aa8.62□□□□□ -1.03
DDX39A-208ENST00000588692 SERF1AO75920 110 aa8.61□□□□□ -1.03
DDX39A-208ENST00000588692 LEPROTL1O95214 131 aa8.61□□□□□ -1.03
DDX39A-208ENST00000588692 LINC00158P58513 81 aa8.61□□□□□ -1.03
DDX39A-208ENST00000588692 KRTAP13-1Q8IUC0 172 aa8.61□□□□□ -1.03
DDX39A-208ENST00000588692 FABP4P15090 132 aa8.59□□□□□ -1.03
DDX39A-208ENST00000588692 LINC00310P59036 64 aa8.59□□□□□ -1.03
DDX39A-208ENST00000588692 HERV-K104P63124 156 aa8.59□□□□□ -1.03
DDX39A-208ENST00000588692 TMEM126AQ9H061 195 aa8.59□□□□□ -1.03
DDX39A-208ENST00000588692 H0Y8G0 127 aa8.58□□□□□ -1.04
DDX39A-208ENST00000588692 HIST1H2BLQ99880 126 aa8.58□□□□□ -1.04
DDX39A-208ENST00000588692 HSPB8Q9UJY1 196 aa8.58□□□□□ -1.04
DDX39A-208ENST00000588692 LINC00587B1AMM8 73 aa8.57□□□□□ -1.04
DDX39A-208ENST00000588692 CRYGAP11844 174 aa8.57□□□□□ -1.04
DDX39A-208ENST00000588692 PLNP26678 52 aa8.57□□□□□ -1.04
DDX39A-208ENST00000588692 PYY3Q5JQD4 70 aa8.57□□□□□ -1.04
DDX39A-208ENST00000588692 MEIG1Q5JSS6 88 aa8.57□□□□□ -1.04
DDX39A-208ENST00000588692 Q8NDZ9 215 aa8.57□□□□□ -1.04
DDX39A-208ENST00000588692 A0A0U1RRA0 63 aa8.57□□□□□ -1.04
DDX39A-208ENST00000588692 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
DDX39A-208ENST00000588692 A0A087X002 238 aa8.56□□□□□ -1.04
DDX39A-208ENST00000588692 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
DDX39A-208ENST00000588692 SMIM13P0DJ93 91 aa8.56□□□□□ -1.04
DDX39A-208ENST00000588692 FAM19A1Q7Z5A9 133 aa8.56□□□□□ -1.04
DDX39A-208ENST00000588692 TMEM238C9JI98 176 aa8.55□□□□□ -1.04
DDX39A-208ENST00000588692 M0R378 163 aa8.55□□□□□ -1.04
DDX39A-208ENST00000588692 PRLHP81277 87 aa8.55□□□□□ -1.04
DDX39A-208ENST00000588692 MAP1LC3CQ9BXW4 147 aa8.55□□□□□ -1.04
DDX39A-208ENST00000588692 FAM229BQ4G0N7 80 aa8.54□□□□□ -1.04
DDX39A-208ENST00000588692 MIR7-3HGQ8N6C7 128 aa8.54□□□□□ -1.04
DDX39A-208ENST00000588692 PLEKHB2Q96CS7 222 aa8.54□□□□□ -1.04
DDX39A-208ENST00000588692 LEPROTO15243 131 aa8.53□□□□□ -1.04
DDX39A-208ENST00000588692 DPM2O94777 84 aa8.53□□□□□ -1.04
DDX39A-208ENST00000588692 HERVK_113P61574 105 aa8.53□□□□□ -1.04
DDX39A-208ENST00000588692 BOD1L2Q8IYS8 172 aa8.53□□□□□ -1.04
DDX39A-208ENST00000588692 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
DDX39A-208ENST00000588692 JOSD1Q15040 202 aaPredicted RBP8.52□□□□□ -1.05
DDX39A-208ENST00000588692 IGKV2D-26A0A0A0MRZ7 120 aa8.51□□□□□ -1.05
DDX39A-208ENST00000588692 J3QQQ9 107 aa8.51□□□□□ -1.05
DDX39A-208ENST00000588692 IGKCP01834 107 aa8.51□□□□□ -1.05
DDX39A-208ENST00000588692 NMUP48645 174 aa8.51□□□□□ -1.05
DDX39A-208ENST00000588692 TSPEAR-AS2P59090 65 aa8.51□□□□□ -1.05
DDX39A-208ENST00000588692 PRYO14603 147 aa8.5□□□□□ -1.05
DDX39A-208ENST00000588692 PCP4P48539 62 aa8.5□□□□□ -1.05
DDX39A-208ENST00000588692 ANAPC11Q9NYG5 84 aa8.5□□□□□ -1.05
DDX39A-208ENST00000588692 TSTD3H0UI37 97 aa8.49□□□□□ -1.05
DDX39A-208ENST00000588692 PMCHL2Q9BQD1 86 aa8.49□□□□□ -1.05
DDX39A-208ENST00000588692 LOC107984156A0A0G2JMH3 177 aa8.48□□□□□ -1.05
DDX39A-208ENST00000588692 NCR3O14931 201 aa8.48□□□□□ -1.05
DDX39A-208ENST00000588692 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
DDX39A-208ENST00000588692 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
DDX39A-208ENST00000588692 ARL17AQ8IVW1 177 aa8.48□□□□□ -1.05
DDX39A-208ENST00000588692 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
DDX39A-208ENST00000588692 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
DDX39A-208ENST00000588692 PRR4Q16378 134 aa8.47□□□□□ -1.05
DDX39A-208ENST00000588692 LINC00337Q8N6G1 96 aa8.47□□□□□ -1.05
DDX39A-208ENST00000588692 RNF213Q63HN8 5207 aa8.47□□□□□ -1.05
DDX39A-208ENST00000588692 SPRR1AP35321 89 aa8.46□□□□□ -1.05
DDX39A-208ENST00000588692 TSPAN13O95857 204 aa8.45□□□□□ -1.06
DDX39A-208ENST00000588692 MIEN1Q9BRT3 115 aa8.45□□□□□ -1.06
DDX39A-208ENST00000588692 ZNF706Q9Y5V0 76 aaPredicted RBP8.45□□□□□ -1.06
DDX39A-208ENST00000588692 TRBV10-3A0A0K0K1G6 114 aa8.45□□□□□ -1.06
DDX39A-208ENST00000588692 TRBV10-2A0A0K0K1G8 114 aa8.45□□□□□ -1.06
DDX39A-208ENST00000588692 DAND5Q8N907 189 aa8.45□□□□□ -1.06
DDX39A-208ENST00000588692 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
DDX39A-208ENST00000588692 E9PLD3 99 aa8.44□□□□□ -1.06
DDX39A-208ENST00000588692 SYS1-DBNDD2H3BUS1 97 aa8.44□□□□□ -1.06
DDX39A-208ENST00000588692 SCGB1D1O95968 90 aa8.44□□□□□ -1.06
DDX39A-208ENST00000588692 ETDCA0A1B0GVM5 59 aa8.43□□□□□ -1.06
DDX39A-208ENST00000588692 KRTAP4-16G5E9R7 235 aaPredicted RBP8.43□□□□□ -1.06
DDX39A-208ENST00000588692 SPRR4Q96PI1 79 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms