RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 IGKV2D-28P01615 120 aa16.85■□□□□ 0.29
SCAMP4-210ENST00000588555 XAGE1AQ9HD64 81 aa16.85■□□□□ 0.29
SCAMP4-210ENST00000588555 Q8NDZ9 215 aa16.84■□□□□ 0.29
SCAMP4-210ENST00000588555 Q8N814 137 aa16.84■□□□□ 0.29
SCAMP4-210ENST00000588555 FRAS1Q86XX4 4008 aa16.83■□□□□ 0.29
SCAMP4-210ENST00000588555 C9orf118A6NHY6 69 aa16.83■□□□□ 0.28
SCAMP4-210ENST00000588555 PGPEP1Q9NXJ5 209 aa16.83■□□□□ 0.28
SCAMP4-210ENST00000588555 NDUFC2O95298 119 aa16.82■□□□□ 0.28
SCAMP4-210ENST00000588555 A0A1B0GV90 55 aa16.82■□□□□ 0.28
SCAMP4-210ENST00000588555 GAGE2EQ4V326 116 aa16.82■□□□□ 0.28
SCAMP4-210ENST00000588555 NAA38Q9BRA0 125 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-210ENST00000588555 GAGE2DQ9UEU5 116 aa16.82■□□□□ 0.28
SCAMP4-210ENST00000588555 TSPAN13O95857 204 aa16.81■□□□□ 0.28
SCAMP4-210ENST00000588555 RPL18AQ02543 176 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-210ENST00000588555 LINC00337Q8N6G1 96 aa16.8■□□□□ 0.28
SCAMP4-210ENST00000588555 H3BUT2 72 aa16.79■□□□□ 0.28
SCAMP4-210ENST00000588555 PRR3P79522 188 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-210ENST00000588555 C9orf129Q5T035 196 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-210ENST00000588555 LOC107984640A0A0U1RRK4 108 aa16.77■□□□□ 0.28
SCAMP4-210ENST00000588555 LCE6AA0A183 80 aa16.77■□□□□ 0.28
SCAMP4-210ENST00000588555 HECTD4Q9Y4D8 3996 aa16.77■□□□□ 0.27
SCAMP4-210ENST00000588555 RPL13AP40429 203 aaKnown RBP16.77■□□□□ 0.27
SCAMP4-210ENST00000588555 RTL8CO15255 209 aa16.76■□□□□ 0.27
SCAMP4-210ENST00000588555 TRAV13-2A0A0B4J235 113 aa16.75■□□□□ 0.27
SCAMP4-210ENST00000588555 C9orf163Q8N9P6 203 aa16.75■□□□□ 0.27
SCAMP4-210ENST00000588555 H7C2G1 150 aa16.74■□□□□ 0.27
SCAMP4-210ENST00000588555 VPREB1P12018 145 aa16.72■□□□□ 0.27
SCAMP4-210ENST00000588555 TNP2Q05952 138 aa16.72■□□□□ 0.27
SCAMP4-210ENST00000588555 FAT2Q9NYQ8 4349 aa16.72■□□□□ 0.27
SCAMP4-210ENST00000588555 A0A1W2PPM0 123 aa16.72■□□□□ 0.27
SCAMP4-210ENST00000588555 GAGE2BQ13066 116 aa16.72■□□□□ 0.27
SCAMP4-210ENST00000588555 NCR3O14931 201 aa16.7■□□□□ 0.26
SCAMP4-210ENST00000588555 DNAH11Q96DT5 4516 aa16.7■□□□□ 0.26
SCAMP4-210ENST00000588555 Q1RN00 199 aa16.69■□□□□ 0.26
SCAMP4-210ENST00000588555 A0A096LNI7 61 aa16.68■□□□□ 0.26
SCAMP4-210ENST00000588555 TRBV10-2A0A0K0K1G8 114 aa16.68■□□□□ 0.26
SCAMP4-210ENST00000588555 C16orf90A8MZG2 172 aa16.68■□□□□ 0.26
SCAMP4-210ENST00000588555 PLA2G2DQ9UNK4 145 aa16.67■□□□□ 0.26
SCAMP4-210ENST00000588555 LINC01620Q4KN68 170 aa16.66■□□□□ 0.26
SCAMP4-210ENST00000588555 SERTAD4-AS1Q5TG53 156 aa16.66■□□□□ 0.26
SCAMP4-210ENST00000588555 SDIM1Q6ZPB5 146 aa16.66■□□□□ 0.26
SCAMP4-210ENST00000588555 OR13C6PQ8NH95 151 aa16.66■□□□□ 0.26
SCAMP4-210ENST00000588555 KMT2CQ8NEZ4 4911 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-210ENST00000588555 TRIAP1O43715 76 aa16.64■□□□□ 0.25
SCAMP4-210ENST00000588555 FABP2P12104 132 aa16.64■□□□□ 0.25
SCAMP4-210ENST00000588555 KRTAP7-1Q8IUC3 87 aa16.64■□□□□ 0.25
SCAMP4-210ENST00000588555 FAM168BA1KXE4 195 aa16.63■□□□□ 0.25
SCAMP4-210ENST00000588555 FUSP35637 526 aaKnown RBP eCLIP16.62■□□□□ 0.25
SCAMP4-210ENST00000588555 VAMP3Q15836 100 aa16.62■□□□□ 0.25
SCAMP4-210ENST00000588555 TMEM126AQ9H061 195 aa16.62■□□□□ 0.25
SCAMP4-210ENST00000588555 IGLV6-57P01721 117 aa16.61■□□□□ 0.25
SCAMP4-210ENST00000588555 PSMB2P49721 201 aa16.61■□□□□ 0.25
SCAMP4-210ENST00000588555 PKIGQ9Y2B9 76 aa16.61■□□□□ 0.25
SCAMP4-210ENST00000588555 RYR2Q92736 4967 aa16.61■□□□□ 0.25
SCAMP4-210ENST00000588555 IGKV2-24A0A0C4DH68 120 aa16.61■□□□□ 0.25
SCAMP4-210ENST00000588555 SMIM11BQ8TCY0 68 aa16.61■□□□□ 0.25
SCAMP4-210ENST00000588555 IGLV5-37A0A075B6J1 123 aa16.6■□□□□ 0.25
SCAMP4-210ENST00000588555 M0R378 163 aa16.6■□□□□ 0.25
SCAMP4-210ENST00000588555 RPL28P46779 137 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-210ENST00000588555 S100A7L2Q5SY68 101 aa16.59■□□□□ 0.25
SCAMP4-210ENST00000588555 PKD1P98161 4303 aa16.58■□□□□ 0.24
SCAMP4-210ENST00000588555 CHTF8P0CG12 524 aa16.58■□□□□ 0.24
SCAMP4-210ENST00000588555 SPCS1Q9Y6A9 102 aa16.58■□□□□ 0.24
SCAMP4-210ENST00000588555 TRBV10-3A0A0K0K1G6 114 aa16.57■□□□□ 0.24
SCAMP4-210ENST00000588555 DNAH5Q8TE73 4624 aa16.56■□□□□ 0.24
SCAMP4-210ENST00000588555 IGLV5-52A0A0A0MRZ9 124 aa16.56■□□□□ 0.24
SCAMP4-210ENST00000588555 NKAPP1Q8N9T2 125 aa16.56■□□□□ 0.24
SCAMP4-210ENST00000588555 K7EP34 96 aa16.55■□□□□ 0.24
SCAMP4-210ENST00000588555 LYRM7Q5U5X0 104 aa16.55■□□□□ 0.24
SCAMP4-210ENST00000588555 FAM19A5Q7Z5A7 132 aaPredicted RBP16.55■□□□□ 0.24
SCAMP4-210ENST00000588555 SCGB1C2P0DMR2 95 aa16.54■□□□□ 0.24
SCAMP4-210ENST00000588555 C7orf33Q8WU49 177 aa16.54■□□□□ 0.24
SCAMP4-210ENST00000588555 A0A1W2PNN7 141 aa16.53■□□□□ 0.24
SCAMP4-210ENST00000588555 GAGE10A6NGK3 116 aa16.53■□□□□ 0.24
SCAMP4-210ENST00000588555 PANO1I0J062 215 aa16.53■□□□□ 0.24
SCAMP4-210ENST00000588555 COX6CP09669 75 aa16.53■□□□□ 0.24
SCAMP4-210ENST00000588555 KRTAP10-2P60368 255 aa16.53■□□□□ 0.24
SCAMP4-210ENST00000588555 LINC00474Q9P2X8 69 aa16.52■□□□□ 0.24
SCAMP4-210ENST00000588555 C22orf24Q9Y442 160 aa16.52■□□□□ 0.24
SCAMP4-210ENST00000588555 TCL1BO95988 128 aa16.51■□□□□ 0.23
SCAMP4-210ENST00000588555 UBE2V1Q13404 147 aa16.49■□□□□ 0.23
SCAMP4-210ENST00000588555 GTF2H5Q6ZYL4 71 aa16.49■□□□□ 0.23
SCAMP4-210ENST00000588555 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-210ENST00000588555 TRBV20-1A0A075B6N2 111 aa16.48■□□□□ 0.23
SCAMP4-210ENST00000588555 SPACA4Q8TDM5 124 aa16.48■□□□□ 0.23
SCAMP4-210ENST00000588555 TRAV23DV6A0A075B6W5 121 aa16.47■□□□□ 0.23
SCAMP4-210ENST00000588555 MRPL55Q7Z7F7 128 aaKnown RBP16.47■□□□□ 0.23
SCAMP4-210ENST00000588555 CLEC2BQ92478 149 aa16.47■□□□□ 0.23
SCAMP4-210ENST00000588555 LINC00167Q96N53 147 aa16.46■□□□□ 0.23
SCAMP4-210ENST00000588555 M0QXV9 152 aa16.45■□□□□ 0.22
SCAMP4-210ENST00000588555 C6orf99Q4VX62 202 aa16.45■□□□□ 0.22
SCAMP4-210ENST00000588555 H3BMG7 143 aa16.44■□□□□ 0.22
SCAMP4-210ENST00000588555 IGLV1-50A0A075B6I6 118 aa16.43■□□□□ 0.22
SCAMP4-210ENST00000588555 LINC00336Q6ZUF6 198 aa16.43■□□□□ 0.22
SCAMP4-210ENST00000588555 KCNQ1DNQ9H478 68 aa16.43■□□□□ 0.22
SCAMP4-210ENST00000588555 EPM2AB3EWF7 344 aa16.41■□□□□ 0.22
SCAMP4-210ENST00000588555 LST1O00453 97 aa16.41■□□□□ 0.22
SCAMP4-210ENST00000588555 ZNF73O43830 326 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-210ENST00000588555 FAM218AQ96MZ4 157 aa16.41■□□□□ 0.22
SCAMP4-210ENST00000588555 RPL37AP8A6NKH3 93 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms