RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 FAM104AQ969W3 186 aa6.72□□□□□ -1.33
LINC01539-201ENST00000587904 IGHV4-30-4P0DP06 118 aa6.71□□□□□ -1.34
LINC01539-201ENST00000587904 RMI2Q96E14 147 aa6.71□□□□□ -1.34
LINC01539-201ENST00000587904 FBN1P35555 2871 aaKnown RBP6.71□□□□□ -1.34
LINC01539-201ENST00000587904 H0YGX0 51 aa6.7□□□□□ -1.34
LINC01539-201ENST00000587904 DEFB130BP0DP73 79 aa6.7□□□□□ -1.34
LINC01539-201ENST00000587904 DEFB130AP0DP74 79 aa6.7□□□□□ -1.34
LINC01539-201ENST00000587904 EGFEM1PQ0D2K5 195 aa6.7□□□□□ -1.34
LINC01539-201ENST00000587904 ESRGQ1W209 222 aa6.7□□□□□ -1.34
LINC01539-201ENST00000587904 NTM-AS1Q6ZSK4 140 aa6.7□□□□□ -1.34
LINC01539-201ENST00000587904 UBE2L6O14933 153 aa6.7□□□□□ -1.34
LINC01539-201ENST00000587904 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
LINC01539-201ENST00000587904 ENHOQ6UWT2 76 aa6.7□□□□□ -1.34
LINC01539-201ENST00000587904 Q9HAA7 133 aa6.7□□□□□ -1.34
LINC01539-201ENST00000587904 STAB1Q9NY15 2570 aa6.69□□□□□ -1.34
LINC01539-201ENST00000587904 IGHV4-28A0A0C4DH34 117 aa6.69□□□□□ -1.34
LINC01539-201ENST00000587904 Q8NAQ8 132 aa6.69□□□□□ -1.34
LINC01539-201ENST00000587904 MPLKIPQ8TAP9 179 aa6.69□□□□□ -1.34
LINC01539-201ENST00000587904 PRO0255Q9UI72 69 aa6.69□□□□□ -1.34
LINC01539-201ENST00000587904 COL6A5A8TX70 2615 aa6.69□□□□□ -1.34
LINC01539-201ENST00000587904 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
LINC01539-201ENST00000587904 FAM19A3Q7Z5A8 133 aa6.69□□□□□ -1.34
LINC01539-201ENST00000587904 DAD1P61803 113 aa6.68□□□□□ -1.34
LINC01539-201ENST00000587904 ZNF625Q96I27 306 aaPredicted RBP6.68□□□□□ -1.34
LINC01539-201ENST00000587904 MDFIQ99750 246 aa6.68□□□□□ -1.34
LINC01539-201ENST00000587904 UBL5Q9BZL1 73 aa6.68□□□□□ -1.34
LINC01539-201ENST00000587904 SNURFQ9Y675 71 aa6.68□□□□□ -1.34
LINC01539-201ENST00000587904 IGLV5-45A0A087WSX0 123 aa6.67□□□□□ -1.34
LINC01539-201ENST00000587904 TRBV6-8A0A0A6YYG3 113 aa6.67□□□□□ -1.34
LINC01539-201ENST00000587904 LOC100131303A0A0U1RQF7 123 aa6.67□□□□□ -1.34
LINC01539-201ENST00000587904 JMJD7-PLA2G4BH0Y9G9 81 aa6.67□□□□□ -1.34
LINC01539-201ENST00000587904 C9orf129Q5T035 196 aaKnown RBP6.67□□□□□ -1.34
LINC01539-201ENST00000587904 SPART-AS1P0CW21 52 aa6.67□□□□□ -1.34
LINC01539-201ENST00000587904 FAM229BQ4G0N7 80 aa6.67□□□□□ -1.34
LINC01539-201ENST00000587904 RNASE13Q5GAN3 156 aaKnown RBP6.67□□□□□ -1.34
LINC01539-201ENST00000587904 TM2D3Q9BRN9 247 aa6.67□□□□□ -1.34
LINC01539-201ENST00000587904 CDC42SE2Q9NRR3 84 aa6.67□□□□□ -1.34
LINC01539-201ENST00000587904 TRRAPQ9Y4A5 3859 aa6.66□□□□□ -1.34
LINC01539-201ENST00000587904 GYPEP15421 78 aa6.66□□□□□ -1.34
LINC01539-201ENST00000587904 KRTAP10-11P60412 298 aa6.65□□□□□ -1.34
LINC01539-201ENST00000587904 Q1T7F1 81 aa6.65□□□□□ -1.34
LINC01539-201ENST00000587904 TRBV7-4A0A0J9YYF1 115 aa6.65□□□□□ -1.35
LINC01539-201ENST00000587904 SOSTDC1Q6X4U4 206 aa6.65□□□□□ -1.35
LINC01539-201ENST00000587904 C6orf223Q8N319 242 aa6.65□□□□□ -1.35
LINC01539-201ENST00000587904 ORMDL1Q9P0S3 153 aa6.64□□□□□ -1.35
LINC01539-201ENST00000587904 NBEAL2Q6ZNJ1 2754 aa6.64□□□□□ -1.35
LINC01539-201ENST00000587904 NCR3O14931 201 aa6.64□□□□□ -1.35
LINC01539-201ENST00000587904 CRPP02741 224 aa6.64□□□□□ -1.35
LINC01539-201ENST00000587904 LINC00242Q5T6M2 205 aa6.64□□□□□ -1.35
LINC01539-201ENST00000587904 KTN1-AS1Q86SY8 53 aa6.64□□□□□ -1.35
LINC01539-201ENST00000587904 RBM12B-AS1Q9P1G2 102 aa6.64□□□□□ -1.35
LINC01539-201ENST00000587904 A0A087WYN8 130 aa6.63□□□□□ -1.35
LINC01539-201ENST00000587904 MIR7-3HGQ8N6C7 128 aa6.63□□□□□ -1.35
LINC01539-201ENST00000587904 C11orf68Q9H3H3 251 aaKnown RBP6.63□□□□□ -1.35
LINC01539-201ENST00000587904 CDKN2A-AS1Q9UH64 79 aa6.63□□□□□ -1.35
LINC01539-201ENST00000587904 CELA1Q9UNI1 258 aa6.63□□□□□ -1.35
LINC01539-201ENST00000587904 DEFB4AO15263 64 aa6.62□□□□□ -1.35
LINC01539-201ENST00000587904 IGLV5-39A0A0G2JS06 123 aa6.62□□□□□ -1.35
LINC01539-201ENST00000587904 A0A1B0GUV1 79 aa6.61□□□□□ -1.35
LINC01539-201ENST00000587904 ANK2Q01484 3957 aa6.61□□□□□ -1.35
LINC01539-201ENST00000587904 TRAV10A0A0B4J240 114 aa6.61□□□□□ -1.35
LINC01539-201ENST00000587904 LINC00167Q96N53 147 aa6.61□□□□□ -1.35
LINC01539-201ENST00000587904 Q9H8V8 135 aa6.61□□□□□ -1.35
LINC01539-201ENST00000587904 FUSP35637 526 aaKnown RBP eCLIP6.6□□□□□ -1.35
LINC01539-201ENST00000587904 CXCL6P80162 114 aa6.6□□□□□ -1.35
LINC01539-201ENST00000587904 TMEM254Q8TBM7 123 aa6.6□□□□□ -1.35
LINC01539-201ENST00000587904 CMYA5Q8N3K9 4069 aa6.6□□□□□ -1.35
LINC01539-201ENST00000587904 DNAH3Q8TD57 4116 aa6.6□□□□□ -1.35
LINC01539-201ENST00000587904 PKD1L1Q8TDX9 2849 aa6.59□□□□□ -1.35
LINC01539-201ENST00000587904 SMIM1B2RUZ4 78 aa6.59□□□□□ -1.35
LINC01539-201ENST00000587904 COX6A2Q02221 97 aa6.59□□□□□ -1.35
LINC01539-201ENST00000587904 Q6ZTC4 211 aa6.59□□□□□ -1.35
LINC01539-201ENST00000587904 IGLV4-60A0A075B6I1 120 aa6.59□□□□□ -1.35
LINC01539-201ENST00000587904 LECT2O14960 151 aa6.59□□□□□ -1.35
LINC01539-201ENST00000587904 NDUFS5O43920 106 aa6.59□□□□□ -1.35
LINC01539-201ENST00000587904 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
LINC01539-201ENST00000587904 KRTAP3-2Q9BYR7 98 aa6.59□□□□□ -1.35
LINC01539-201ENST00000587904 H3BNG1 76 aa6.58□□□□□ -1.36
LINC01539-201ENST00000587904 SMIM11BQ8TCY0 68 aa6.58□□□□□ -1.36
LINC01539-201ENST00000587904 PRYO14603 147 aa6.57□□□□□ -1.36
LINC01539-201ENST00000587904 LINC01547P58512 204 aaPredicted RBP6.57□□□□□ -1.36
LINC01539-201ENST00000587904 UBE2BP63146 152 aa6.57□□□□□ -1.36
LINC01539-201ENST00000587904 LINC00959A0A1B0GUT2 108 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 hDV103S1A0JD37 113 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 TMEM256-PLSCR3K7ERE1 68 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 HTN3P15516 51 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 NREPQ16612 68 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 LELP1Q5T871 98 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 LINC00337Q8N6G1 96 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 LINC00588Q9Y4M8 146 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 NBEAL1Q6ZS30 2694 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 A0A087WZ39 114 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 A0A096LPF7 62 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 IGHV3OR16-9A0A0B4J2B5 98 aa6.56□□□□□ -1.36
LINC01539-201ENST00000587904 Q6ZVQ6 151 aa6.55□□□□□ -1.36
LINC01539-201ENST00000587904 M0R378 163 aa6.54□□□□□ -1.36
LINC01539-201ENST00000587904 Q6ZRP5 223 aa6.54□□□□□ -1.36
LINC01539-201ENST00000587904 IGKV2-28A0A075B6P5 120 aa6.54□□□□□ -1.36
LINC01539-201ENST00000587904 LOC110117498A0A087WWA1 95 aa6.54□□□□□ -1.36
LINC01539-201ENST00000587904 IGKV3OR2-268A0A0C4DH90 116 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms