RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PRR34Q9NV39 138 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 MALP21145 153 aa5.23□□□□□ -1.57
VMP1-204ENST00000587259 XCL1P47992 114 aa5.23□□□□□ -1.57
VMP1-204ENST00000587259 LINC01556Q5JQF7 62 aa5.23□□□□□ -1.57
VMP1-204ENST00000587259 MEIG1Q5JSS6 88 aa5.23□□□□□ -1.57
VMP1-204ENST00000587259 GTF2H5Q6ZYL4 71 aa5.23□□□□□ -1.57
VMP1-204ENST00000587259 ZNF625Q96I27 306 aaPredicted RBP5.23□□□□□ -1.57
VMP1-204ENST00000587259 A0A0B4J2C4 111 aa5.22□□□□□ -1.57
VMP1-204ENST00000587259 IBA57-AS1B1ANH7 110 aa5.22□□□□□ -1.57
VMP1-204ENST00000587259 VAMP3Q15836 100 aa5.22□□□□□ -1.57
VMP1-204ENST00000587259 CFAP161Q6P656 301 aa5.22□□□□□ -1.57
VMP1-204ENST00000587259 CHCHD10Q8WYQ3 142 aaPredicted RBP5.22□□□□□ -1.57
VMP1-204ENST00000587259 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
VMP1-204ENST00000587259 A0A087WTM6 91 aa5.21□□□□□ -1.58
VMP1-204ENST00000587259 FABP2P12104 132 aa5.21□□□□□ -1.58
VMP1-204ENST00000587259 CKS1BP61024 79 aa5.21□□□□□ -1.58
VMP1-204ENST00000587259 COX17Q14061 63 aa5.21□□□□□ -1.58
VMP1-204ENST00000587259 C6orf226Q5I0X4 101 aa5.21□□□□□ -1.58
VMP1-204ENST00000587259 CLPSL2Q6UWE3 100 aa5.21□□□□□ -1.58
VMP1-204ENST00000587259 RAB37Q96AX2 223 aa5.21□□□□□ -1.58
VMP1-204ENST00000587259 TOMM7Q9P0U1 55 aa5.21□□□□□ -1.58
VMP1-204ENST00000587259 KLK12Q9UKR0 248 aa5.21□□□□□ -1.58
VMP1-204ENST00000587259 VPS13BQ7Z7G8 4022 aa5.2□□□□□ -1.58
VMP1-204ENST00000587259 F8WDY8 70 aa5.2□□□□□ -1.58
VMP1-204ENST00000587259 C5orf38Q86SI9 138 aa5.2□□□□□ -1.58
VMP1-204ENST00000587259 WFDC10BQ8IUB3 73 aa5.2□□□□□ -1.58
VMP1-204ENST00000587259 RMI2Q96E14 147 aa5.2□□□□□ -1.58
VMP1-204ENST00000587259 LITAFQ99732 161 aa5.2□□□□□ -1.58
VMP1-204ENST00000587259 PRO1854Q9UHT4 67 aa5.2□□□□□ -1.58
VMP1-204ENST00000587259 A0A1W2PPM0 123 aa5.19□□□□□ -1.58
VMP1-204ENST00000587259 A4D1N5 150 aa5.19□□□□□ -1.58
VMP1-204ENST00000587259 IGHV3-33P01772 117 aa5.19□□□□□ -1.58
VMP1-204ENST00000587259 FOXI1Q12951 378 aa5.19□□□□□ -1.58
VMP1-204ENST00000587259 UBE2V1Q13404 147 aa5.19□□□□□ -1.58
VMP1-204ENST00000587259 MUSTN1Q8IVN3 82 aa5.19□□□□□ -1.58
VMP1-204ENST00000587259 UBE2WQ96B02 151 aa5.19□□□□□ -1.58
VMP1-204ENST00000587259 C1orf43Q9BWL3 253 aa5.19□□□□□ -1.58
VMP1-204ENST00000587259 GAGE12HA6NDE8 117 aa5.18□□□□□ -1.58
VMP1-204ENST00000587259 H3BUT2 72 aa5.18□□□□□ -1.58
VMP1-204ENST00000587259 FAM30AQ9NZY2 134 aa5.18□□□□□ -1.58
VMP1-204ENST00000587259 ERG28Q9UKR5 140 aa5.18□□□□□ -1.58
VMP1-204ENST00000587259 IGLV10-54A0A075B6I4 117 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 TRBV20-1A0A075B6N2 111 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 GAGE10A6NGK3 116 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 K7EP34 96 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 K7ERJ3 54 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 COX6CP09669 75 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 CFC1BP0CG36 223 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 CFC1P0CG37 223 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 SPAG11BQ08648 103 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 ENHOQ6UWT2 76 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 LINC00308Q8TCZ7 52 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 SPCS1Q9Y6A9 102 aa5.17□□□□□ -1.58
VMP1-204ENST00000587259 LINC00158P58513 81 aa5.16□□□□□ -1.58
VMP1-204ENST00000587259 Q1RN00 199 aa5.16□□□□□ -1.58
VMP1-204ENST00000587259 ADAMTSL4-AS1Q5T5F5 129 aa5.16□□□□□ -1.58
VMP1-204ENST00000587259 GVQW2A0A096LPI5 108 aaPredicted RBP5.15□□□□□ -1.59
VMP1-204ENST00000587259 IGLV5-52A0A0A0MRZ9 124 aa5.15□□□□□ -1.59
VMP1-204ENST00000587259 TRAV13-2A0A0B4J235 113 aa5.15□□□□□ -1.59
VMP1-204ENST00000587259 TRBV30A0A0K0K1B3 111 aa5.15□□□□□ -1.59
VMP1-204ENST00000587259 ZNF561-AS1K7EIQ3 104 aa5.15□□□□□ -1.59
VMP1-204ENST00000587259 TSPAN13O95857 204 aa5.15□□□□□ -1.59
VMP1-204ENST00000587259 MIR7-3HGQ8N6C7 128 aa5.15□□□□□ -1.59
VMP1-204ENST00000587259 C2orf48Q96LS8 159 aa5.15□□□□□ -1.59
VMP1-204ENST00000587259 LOC107984156A0A0G2JMH3 177 aa5.14□□□□□ -1.59
VMP1-204ENST00000587259 LRCOL1A6NCL2 159 aa5.14□□□□□ -1.59
VMP1-204ENST00000587259 PSMB2P49721 201 aa5.14□□□□□ -1.59
VMP1-204ENST00000587259 KIAA0087Q14695 138 aa5.14□□□□□ -1.59
VMP1-204ENST00000587259 ARL17AQ8IVW1 177 aa5.14□□□□□ -1.59
VMP1-204ENST00000587259 IGKV2D-24A0A075B6R9 120 aa5.13□□□□□ -1.59
VMP1-204ENST00000587259 NDUFC2O95298 119 aa5.13□□□□□ -1.59
VMP1-204ENST00000587259 WFDC2Q14508 124 aa5.13□□□□□ -1.59
VMP1-204ENST00000587259 LINC01620Q4KN68 170 aa5.13□□□□□ -1.59
VMP1-204ENST00000587259 DAND5Q8N907 189 aa5.13□□□□□ -1.59
VMP1-204ENST00000587259 Q9HAA7 133 aa5.13□□□□□ -1.59
VMP1-204ENST00000587259 SND1-IT1Q9HBX3 110 aa5.13□□□□□ -1.59
VMP1-204ENST00000587259 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
VMP1-204ENST00000587259 A0A0U1RRA0 63 aa5.12□□□□□ -1.59
VMP1-204ENST00000587259 LECT2O14960 151 aa5.12□□□□□ -1.59
VMP1-204ENST00000587259 PSCAO43653 123 aa5.12□□□□□ -1.59
VMP1-204ENST00000587259 SCGB1C2P0DMR2 95 aa5.12□□□□□ -1.59
VMP1-204ENST00000587259 PFN2P35080 140 aa5.12□□□□□ -1.59
VMP1-204ENST00000587259 RPL13AP40429 203 aaKnown RBP5.12□□□□□ -1.59
VMP1-204ENST00000587259 NPC2P61916 151 aa5.12□□□□□ -1.59
VMP1-204ENST00000587259 NTN5Q8WTR8 489 aaPredicted RBP5.12□□□□□ -1.59
VMP1-204ENST00000587259 F8W1H4 67 aa5.11□□□□□ -1.59
VMP1-204ENST00000587259 KRTAP26-1Q6PEX3 210 aa5.11□□□□□ -1.59
VMP1-204ENST00000587259 C2orf82Q6UX34 121 aa5.11□□□□□ -1.59
VMP1-204ENST00000587259 Q8N814 137 aa5.11□□□□□ -1.59
VMP1-204ENST00000587259 CAMK2N2Q96S95 79 aa5.11□□□□□ -1.59
VMP1-204ENST00000587259 CBY1Q9Y3M2 126 aa5.11□□□□□ -1.59
VMP1-204ENST00000587259 LRP1Q07954 4544 aaKnown RBP5.11□□□□□ -1.59
VMP1-204ENST00000587259 ATXN8Q156A1 80 aa5.1□□□□□ -1.59
VMP1-204ENST00000587259 RNF151Q2KHN1 245 aa5.1□□□□□ -1.59
VMP1-204ENST00000587259 SOSTDC1Q6X4U4 206 aa5.1□□□□□ -1.59
VMP1-204ENST00000587259 NAA38Q9BRA0 125 aaKnown RBP5.1□□□□□ -1.59
VMP1-204ENST00000587259 PKIGQ9Y2B9 76 aa5.1□□□□□ -1.59
VMP1-204ENST00000587259 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.09□□□□□ -1.59
VMP1-204ENST00000587259 KRTAP29-1A8MX34 341 aaPredicted RBP5.09□□□□□ -1.59
VMP1-204ENST00000587259 H7C2G1 150 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms