RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
LIG3-207ENST00000586119 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
LIG3-207ENST00000586119 ORAOV1Q8WV07 137 aa7.03□□□□□ -1.28
LIG3-207ENST00000586119 C11orf86A6NJI1 115 aa7.02□□□□□ -1.29
LIG3-207ENST00000586119 UNQ6190/PRO20217Q6UXQ8 127 aa7.02□□□□□ -1.29
LIG3-207ENST00000586119 MUC2Q02817 5179 aa7.02□□□□□ -1.29
LIG3-207ENST00000586119 SMIM1B2RUZ4 78 aa7.01□□□□□ -1.29
LIG3-207ENST00000586119 H0Y8G0 127 aa7.01□□□□□ -1.29
LIG3-207ENST00000586119 DPM2O94777 84 aa7.01□□□□□ -1.29
LIG3-207ENST00000586119 TMEM170BQ5T4T1 132 aa7.01□□□□□ -1.29
LIG3-207ENST00000586119 Q8IZM0 81 aa7.01□□□□□ -1.29
LIG3-207ENST00000586119 IGKCP01834 107 aa7□□□□□ -1.29
LIG3-207ENST00000586119 PRSS2P07478 247 aa7□□□□□ -1.29
LIG3-207ENST00000586119 KRTAP1-4P0C5Y4 121 aa7□□□□□ -1.29
LIG3-207ENST00000586119 CXCL5P42830 114 aa7□□□□□ -1.29
LIG3-207ENST00000586119 KIAA0087Q14695 138 aa7□□□□□ -1.29
LIG3-207ENST00000586119 RNF151Q2KHN1 245 aa7□□□□□ -1.29
LIG3-207ENST00000586119 LINC01545Q5VT33 79 aa7□□□□□ -1.29
LIG3-207ENST00000586119 FAM19A5Q7Z5A7 132 aaPredicted RBP7□□□□□ -1.29
LIG3-207ENST00000586119 C6orf48Q9UBA6 75 aa7□□□□□ -1.29
LIG3-207ENST00000586119 IGLV5-39A0A0G2JS06 123 aa6.99□□□□□ -1.29
LIG3-207ENST00000586119 TMEM223A0PJW6 202 aa6.99□□□□□ -1.29
LIG3-207ENST00000586119 H0Y9J4 135 aa6.99□□□□□ -1.29
LIG3-207ENST00000586119 NDUFA1O15239 70 aa6.99□□□□□ -1.29
LIG3-207ENST00000586119 SPINK8P0C7L1 97 aa6.99□□□□□ -1.29
LIG3-207ENST00000586119 GAGE2EQ4V326 116 aa6.99□□□□□ -1.29
LIG3-207ENST00000586119 C6orf226Q5I0X4 101 aa6.99□□□□□ -1.29
LIG3-207ENST00000586119 DIRC1Q969H9 104 aa6.99□□□□□ -1.29
LIG3-207ENST00000586119 GAGE2DQ9UEU5 116 aa6.99□□□□□ -1.29
LIG3-207ENST00000586119 HSBP1L1C9JCN9 74 aa6.98□□□□□ -1.29
LIG3-207ENST00000586119 CKS1BP61024 79 aa6.98□□□□□ -1.29
LIG3-207ENST00000586119 SFTA2Q6UW10 78 aa6.98□□□□□ -1.29
LIG3-207ENST00000586119 COX7B2Q8TF08 81 aa6.98□□□□□ -1.29
LIG3-207ENST00000586119 PMCHL2Q9BQD1 86 aa6.98□□□□□ -1.29
LIG3-207ENST00000586119 TRBV30A0A0K0K1B3 111 aa6.97□□□□□ -1.29
LIG3-207ENST00000586119 HERVK_113P61574 105 aa6.97□□□□□ -1.29
LIG3-207ENST00000586119 TOMM7Q9P0U1 55 aa6.97□□□□□ -1.29
LIG3-207ENST00000586119 CBY1Q9Y3M2 126 aa6.96□□□□□ -1.3
LIG3-207ENST00000586119 TLX1NBP0CAT3 122 aa6.95□□□□□ -1.3
LIG3-207ENST00000586119 PRR4Q16378 134 aa6.95□□□□□ -1.3
LIG3-207ENST00000586119 C2orf82Q6UX34 121 aa6.95□□□□□ -1.3
LIG3-207ENST00000586119 PLEKHB2Q96CS7 222 aa6.95□□□□□ -1.3
LIG3-207ENST00000586119 BATFQ16520 125 aa6.94□□□□□ -1.3
LIG3-207ENST00000586119 C9orf129Q5T035 196 aaKnown RBP6.94□□□□□ -1.3
LIG3-207ENST00000586119 IGLV1-50A0A075B6I6 118 aa6.93□□□□□ -1.3
LIG3-207ENST00000586119 E9PLD3 99 aa6.93□□□□□ -1.3
LIG3-207ENST00000586119 M0QXV9 152 aa6.93□□□□□ -1.3
LIG3-207ENST00000586119 LEPROTO15243 131 aa6.93□□□□□ -1.3
LIG3-207ENST00000586119 UBE2BP63146 152 aa6.93□□□□□ -1.3
LIG3-207ENST00000586119 SLC25A34Q6PIV7 304 aa6.93□□□□□ -1.3
LIG3-207ENST00000586119 UBE2V1Q13404 147 aa6.92□□□□□ -1.3
LIG3-207ENST00000586119 TSPAN13O95857 204 aa6.91□□□□□ -1.3
LIG3-207ENST00000586119 NMUP48645 174 aa6.91□□□□□ -1.3
LIG3-207ENST00000586119 HERV-K104P63124 156 aa6.91□□□□□ -1.3
LIG3-207ENST00000586119 ZNF625Q96I27 306 aaPredicted RBP6.91□□□□□ -1.3
LIG3-207ENST00000586119 MYMXA0A1B0GTQ4 84 aa6.9□□□□□ -1.3
LIG3-207ENST00000586119 NDUFC2-KCTD14E9PQ53 114 aa6.9□□□□□ -1.3
LIG3-207ENST00000586119 J3QQQ9 107 aa6.9□□□□□ -1.3
LIG3-207ENST00000586119 LGALS3P17931 250 aaKnown RBP6.9□□□□□ -1.3
LIG3-207ENST00000586119 COX17Q14061 63 aa6.9□□□□□ -1.3
LIG3-207ENST00000586119 COX8AP10176 69 aa6.89□□□□□ -1.31
LIG3-207ENST00000586119 HINT1P49773 126 aaPredicted RBP6.89□□□□□ -1.31
LIG3-207ENST00000586119 ATOH7Q8N100 152 aa6.89□□□□□ -1.31
LIG3-207ENST00000586119 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
LIG3-207ENST00000586119 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
LIG3-207ENST00000586119 ERG28Q9UKR5 140 aa6.88□□□□□ -1.31
LIG3-207ENST00000586119 C22orf24Q9Y442 160 aa6.88□□□□□ -1.31
LIG3-207ENST00000586119 ZNF861PO60384 105 aa6.87□□□□□ -1.31
LIG3-207ENST00000586119 TSPEAR-AS2P59090 65 aa6.87□□□□□ -1.31
LIG3-207ENST00000586119 BVES-AS1Q5T3Y7 98 aa6.87□□□□□ -1.31
LIG3-207ENST00000586119 XAGE1AQ9HD64 81 aa6.87□□□□□ -1.31
LIG3-207ENST00000586119 FAT4Q6V0I7 4981 aa6.87□□□□□ -1.31
LIG3-207ENST00000586119 A0A087X002 238 aa6.86□□□□□ -1.31
LIG3-207ENST00000586119 ANAPC11Q9NYG5 84 aa6.86□□□□□ -1.31
LIG3-207ENST00000586119 A6NDN8 102 aa6.85□□□□□ -1.31
LIG3-207ENST00000586119 RPL13AP40429 203 aaKnown RBP6.85□□□□□ -1.31
LIG3-207ENST00000586119 ANKRD39Q53RE8 183 aa6.85□□□□□ -1.31
LIG3-207ENST00000586119 IGKV2D-26A0A0A0MRZ7 120 aa6.84□□□□□ -1.31
LIG3-207ENST00000586119 TAX1BP3O14907 124 aa6.84□□□□□ -1.31
LIG3-207ENST00000586119 MEIG1Q5JSS6 88 aa6.84□□□□□ -1.31
LIG3-207ENST00000586119 ZNF815PA8K554 130 aa6.83□□□□□ -1.32
LIG3-207ENST00000586119 PFN2P35080 140 aa6.83□□□□□ -1.32
LIG3-207ENST00000586119 LINC00158P58513 81 aa6.83□□□□□ -1.32
LIG3-207ENST00000586119 HSD52Q0P140 79 aa6.83□□□□□ -1.32
LIG3-207ENST00000586119 VAMP3Q15836 100 aa6.83□□□□□ -1.32
LIG3-207ENST00000586119 BOD1L2Q8IYS8 172 aa6.83□□□□□ -1.32
LIG3-207ENST00000586119 MUC17Q685J3 4493 aa6.83□□□□□ -1.32
LIG3-207ENST00000586119 A0A0J9YXY3 114 aa6.82□□□□□ -1.32
LIG3-207ENST00000586119 TIMM17BO60830 172 aa6.82□□□□□ -1.32
LIG3-207ENST00000586119 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
LIG3-207ENST00000586119 RPL37AP8A6NKH3 93 aa6.81□□□□□ -1.32
LIG3-207ENST00000586119 SMIM13P0DJ93 91 aa6.81□□□□□ -1.32
LIG3-207ENST00000586119 GTF2H5Q6ZYL4 71 aa6.81□□□□□ -1.32
LIG3-207ENST00000586119 RETNLBQ9BQ08 111 aa6.81□□□□□ -1.32
LIG3-207ENST00000586119 SND1-IT1Q9HBX3 110 aa6.81□□□□□ -1.32
LIG3-207ENST00000586119 HIGD1BQ9P298 99 aa6.81□□□□□ -1.32
LIG3-207ENST00000586119 KRTAP13-2Q52LG2 175 aa6.8□□□□□ -1.32
LIG3-207ENST00000586119 C2orf91Q6ZV80 131 aa6.8□□□□□ -1.32
LIG3-207ENST00000586119 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
LIG3-207ENST00000586119 LINC00167Q96N53 147 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms