RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 IGHV1-58A0A0C4DH39 117 aa10.97□□□□□ -0.65
TOP3A-220ENST00000585031 CCL25O15444 150 aa10.97□□□□□ -0.65
TOP3A-220ENST00000585031 HINT1P49773 126 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-220ENST00000585031 FOXI1Q12951 378 aa10.96□□□□□ -0.65
TOP3A-220ENST00000585031 LINC00474Q9P2X8 69 aa10.96□□□□□ -0.65
TOP3A-220ENST00000585031 CDKN2A-AS1Q9UH64 79 aa10.96□□□□□ -0.65
TOP3A-220ENST00000585031 SPINK8P0C7L1 97 aa10.95□□□□□ -0.66
TOP3A-220ENST00000585031 SS18Q15532 418 aa10.95□□□□□ -0.66
TOP3A-220ENST00000585031 TAL2Q16559 108 aa10.95□□□□□ -0.66
TOP3A-220ENST00000585031 COL5A1-AS1Q5SY13 56 aa10.95□□□□□ -0.66
TOP3A-220ENST00000585031 SCGB1D4Q6XE38 83 aa10.95□□□□□ -0.66
TOP3A-220ENST00000585031 MUC17Q685J3 4493 aa10.94□□□□□ -0.66
TOP3A-220ENST00000585031 PRR4Q16378 134 aa10.94□□□□□ -0.66
TOP3A-220ENST00000585031 LINC00959A0A1B0GUT2 108 aa10.93□□□□□ -0.66
TOP3A-220ENST00000585031 TSPEAR-AS2P59090 65 aa10.93□□□□□ -0.66
TOP3A-220ENST00000585031 BVES-AS1Q5T3Y7 98 aa10.93□□□□□ -0.66
TOP3A-220ENST00000585031 PTTG1IPP53801 180 aa10.92□□□□□ -0.66
TOP3A-220ENST00000585031 ORAOV1Q8WV07 137 aa10.91□□□□□ -0.66
TOP3A-220ENST00000585031 CARD19Q96LW7 228 aa10.91□□□□□ -0.66
TOP3A-220ENST00000585031 HIST1H4GQ99525 98 aa10.91□□□□□ -0.66
TOP3A-220ENST00000585031 IGLV5-39A0A0G2JS06 123 aa10.9□□□□□ -0.66
TOP3A-220ENST00000585031 A6NDN8 102 aa10.9□□□□□ -0.66
TOP3A-220ENST00000585031 NDUFA12Q9UI09 145 aa10.9□□□□□ -0.66
TOP3A-220ENST00000585031 SMIM1B2RUZ4 78 aa10.89□□□□□ -0.67
TOP3A-220ENST00000585031 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
TOP3A-220ENST00000585031 C1orf137Q5JT78 98 aa10.89□□□□□ -0.67
TOP3A-220ENST00000585031 PHF5AQ7RTV0 110 aaKnown RBP10.88□□□□□ -0.67
TOP3A-220ENST00000585031 KRTAP11-1Q8IUC1 163 aa10.88□□□□□ -0.67
TOP3A-220ENST00000585031 LINC01561Q8N1V8 128 aa10.88□□□□□ -0.67
TOP3A-220ENST00000585031 SPANXB1Q9NS25 103 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-220ENST00000585031 A0A087WZ39 114 aa10.87□□□□□ -0.67
TOP3A-220ENST00000585031 TMEM238C9JI98 176 aa10.87□□□□□ -0.67
TOP3A-220ENST00000585031 KRTAP1-4P0C5Y4 121 aa10.87□□□□□ -0.67
TOP3A-220ENST00000585031 XCL1P47992 114 aa10.87□□□□□ -0.67
TOP3A-220ENST00000585031 SYCNQ0VAF6 134 aa10.87□□□□□ -0.67
TOP3A-220ENST00000585031 CEND1Q8N111 149 aa10.87□□□□□ -0.67
TOP3A-220ENST00000585031 IGHV3OR16-9A0A0B4J2B5 98 aa10.86□□□□□ -0.67
TOP3A-220ENST00000585031 NDUFA1O15239 70 aa10.86□□□□□ -0.67
TOP3A-220ENST00000585031 C9orf116Q5BN46 136 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-220ENST00000585031 FSIP2Q5CZC0 6907 aa10.85□□□□□ -0.67
TOP3A-220ENST00000585031 CD164L2Q6UWJ8 174 aa10.85□□□□□ -0.67
TOP3A-220ENST00000585031 CRCT1Q9UGL9 99 aa10.85□□□□□ -0.67
TOP3A-220ENST00000585031 A0A0J9YXY3 114 aa10.84□□□□□ -0.67
TOP3A-220ENST00000585031 TMEM238LA0A1B0GVL6 79 aa10.84□□□□□ -0.67
TOP3A-220ENST00000585031 A6NJY4 79 aa10.84□□□□□ -0.67
TOP3A-220ENST00000585031 IGLV7-43P04211 117 aa10.84□□□□□ -0.67
TOP3A-220ENST00000585031 HERV-K104P63124 156 aa10.84□□□□□ -0.67
TOP3A-220ENST00000585031 LCE2DQ5TA82 110 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-220ENST00000585031 SFTA2Q6UW10 78 aa10.84□□□□□ -0.67
TOP3A-220ENST00000585031 COX7B2Q8TF08 81 aa10.84□□□□□ -0.67
TOP3A-220ENST00000585031 PKIGQ9Y2B9 76 aa10.84□□□□□ -0.67
TOP3A-220ENST00000585031 LOC107984640A0A0U1RRK4 108 aa10.83□□□□□ -0.68
TOP3A-220ENST00000585031 TIMM17BO60830 172 aa10.83□□□□□ -0.68
TOP3A-220ENST00000585031 C5orf38Q86SI9 138 aa10.83□□□□□ -0.68
TOP3A-220ENST00000585031 DIRC1Q969H9 104 aa10.83□□□□□ -0.68
TOP3A-220ENST00000585031 H0Y9J4 135 aa10.82□□□□□ -0.68
TOP3A-220ENST00000585031 COX7A2LO14548 114 aa10.82□□□□□ -0.68
TOP3A-220ENST00000585031 IGLV1-50A0A075B6I6 118 aa10.81□□□□□ -0.68
TOP3A-220ENST00000585031 FXYD2P54710 66 aa10.81□□□□□ -0.68
TOP3A-220ENST00000585031 Q6ZVH6 145 aa10.81□□□□□ -0.68
TOP3A-220ENST00000585031 PRSS2P07478 247 aa10.8□□□□□ -0.68
TOP3A-220ENST00000585031 TOMM7Q9P0U1 55 aa10.8□□□□□ -0.68
TOP3A-220ENST00000585031 A0A1B0GV90 55 aa10.79□□□□□ -0.68
TOP3A-220ENST00000585031 ZNF561-AS1K7EIQ3 104 aa10.79□□□□□ -0.68
TOP3A-220ENST00000585031 APOMO95445 188 aa10.79□□□□□ -0.68
TOP3A-220ENST00000585031 SMIM13P0DJ93 91 aa10.79□□□□□ -0.68
TOP3A-220ENST00000585031 MALP21145 153 aa10.79□□□□□ -0.68
TOP3A-220ENST00000585031 COPS9Q8WXC6 57 aa10.79□□□□□ -0.68
TOP3A-220ENST00000585031 SPANXDQ9BXN6 97 aa10.79□□□□□ -0.68
TOP3A-220ENST00000585031 SPANXCQ9NY87 97 aa10.79□□□□□ -0.68
TOP3A-220ENST00000585031 Q8IZM0 81 aa10.78□□□□□ -0.68
TOP3A-220ENST00000585031 ZNF625Q96I27 306 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-220ENST00000585031 RPL24P83731 157 aaKnown RBP10.77□□□□□ -0.69
TOP3A-220ENST00000585031 MEIG1Q5JSS6 88 aa10.77□□□□□ -0.69
TOP3A-220ENST00000585031 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.69
TOP3A-220ENST00000585031 TAX1BP3O14907 124 aa10.76□□□□□ -0.69
TOP3A-220ENST00000585031 IFITM1P13164 125 aa10.76□□□□□ -0.69
TOP3A-220ENST00000585031 CXCL5P42830 114 aa10.76□□□□□ -0.69
TOP3A-220ENST00000585031 C6orf226Q5I0X4 101 aa10.76□□□□□ -0.69
TOP3A-220ENST00000585031 FAM168BA1KXE4 195 aa10.75□□□□□ -0.69
TOP3A-220ENST00000585031 TSPAN13O95857 204 aa10.74□□□□□ -0.69
TOP3A-220ENST00000585031 RPL18AQ02543 176 aaKnown RBP10.74□□□□□ -0.69
TOP3A-220ENST00000585031 LITAFQ99732 161 aa10.74□□□□□ -0.69
TOP3A-220ENST00000585031 A0A1B0GWB2 263 aa10.73□□□□□ -0.69
TOP3A-220ENST00000585031 CKS1BP61024 79 aa10.72□□□□□ -0.69
TOP3A-220ENST00000585031 KRTAP7-1Q8IUC3 87 aa10.72□□□□□ -0.69
TOP3A-220ENST00000585031 MUSTN1Q8IVN3 82 aa10.72□□□□□ -0.69
TOP3A-220ENST00000585031 CAMK2N2Q96S95 79 aa10.72□□□□□ -0.69
TOP3A-220ENST00000585031 C9orf118A6NHY6 69 aa10.71□□□□□ -0.69
TOP3A-220ENST00000585031 RAB37Q96AX2 223 aa10.71□□□□□ -0.69
TOP3A-220ENST00000585031 ADAMTSL4-AS1Q5T5F5 129 aa10.7□□□□□ -0.7
TOP3A-220ENST00000585031 A4D1N5 150 aa10.69□□□□□ -0.7
TOP3A-220ENST00000585031 K7ERJ3 54 aa10.69□□□□□ -0.7
TOP3A-220ENST00000585031 SPAG11BQ08648 103 aa10.69□□□□□ -0.7
TOP3A-220ENST00000585031 PPDPFQ9H3Y8 114 aa10.69□□□□□ -0.7
TOP3A-220ENST00000585031 RPL13AP40429 203 aaKnown RBP10.68□□□□□ -0.7
TOP3A-220ENST00000585031 C2orf48Q96LS8 159 aa10.68□□□□□ -0.7
TOP3A-220ENST00000585031 A0A0B4J2C4 111 aa10.67□□□□□ -0.7
TOP3A-220ENST00000585031 LINC00158P58513 81 aa10.67□□□□□ -0.7
TOP3A-220ENST00000585031 KIAA0087Q14695 138 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms