RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 H0Y9J4 135 aa6.31□□□□□ -1.4
CASC3-210ENST00000584997 SPAG11BQ08648 103 aa6.31□□□□□ -1.4
CASC3-210ENST00000584997 LINC00242Q5T6M2 205 aa6.31□□□□□ -1.4
CASC3-210ENST00000584997 FAM19A3Q7Z5A8 133 aa6.31□□□□□ -1.4
CASC3-210ENST00000584997 C5orf38Q86SI9 138 aa6.31□□□□□ -1.4
CASC3-210ENST00000584997 UQCR10Q9UDW1 63 aa6.31□□□□□ -1.4
CASC3-210ENST00000584997 IGLV5-45A0A087WSX0 123 aa6.3□□□□□ -1.4
CASC3-210ENST00000584997 HSBP1L1C9JCN9 74 aa6.3□□□□□ -1.4
CASC3-210ENST00000584997 NMUP48645 174 aa6.3□□□□□ -1.4
CASC3-210ENST00000584997 PRR4Q16378 134 aa6.3□□□□□ -1.4
CASC3-210ENST00000584997 RNF151Q2KHN1 245 aa6.3□□□□□ -1.4
CASC3-210ENST00000584997 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
CASC3-210ENST00000584997 BOD1L2Q8IYS8 172 aa6.3□□□□□ -1.4
CASC3-210ENST00000584997 MUC2Q02817 5179 aa6.29□□□□□ -1.4
CASC3-210ENST00000584997 IGLV1-50A0A075B6I6 118 aa6.29□□□□□ -1.4
CASC3-210ENST00000584997 A0A0U1RQV1 116 aa6.29□□□□□ -1.4
CASC3-210ENST00000584997 TINCRA0A1B0GVN0 87 aa6.29□□□□□ -1.4
CASC3-210ENST00000584997 E9PLD3 99 aa6.29□□□□□ -1.4
CASC3-210ENST00000584997 CTAG1AP78358 180 aa6.29□□□□□ -1.4
CASC3-210ENST00000584997 TMEM170BQ5T4T1 132 aa6.29□□□□□ -1.4
CASC3-210ENST00000584997 SLC25A34Q6PIV7 304 aa6.29□□□□□ -1.4
CASC3-210ENST00000584997 PLEKHB2Q96CS7 222 aa6.29□□□□□ -1.4
CASC3-210ENST00000584997 NDUFA1O15239 70 aa6.28□□□□□ -1.4
CASC3-210ENST00000584997 SPINK8P0C7L1 97 aa6.28□□□□□ -1.4
CASC3-210ENST00000584997 FAM19A5Q7Z5A7 132 aaPredicted RBP6.28□□□□□ -1.4
CASC3-210ENST00000584997 ORAOV1Q8WV07 137 aa6.28□□□□□ -1.4
CASC3-210ENST00000584997 SNHG12Q9BXW3 62 aa6.28□□□□□ -1.4
CASC3-210ENST00000584997 CDKN2A-AS1Q9UH64 79 aa6.28□□□□□ -1.4
CASC3-210ENST00000584997 FAM168BA1KXE4 195 aa6.27□□□□□ -1.41
CASC3-210ENST00000584997 PAPPA-AS1Q5QFB9 102 aa6.27□□□□□ -1.41
CASC3-210ENST00000584997 F8WDY8 70 aa6.26□□□□□ -1.41
CASC3-210ENST00000584997 DLEU1O43261 78 aa6.26□□□□□ -1.41
CASC3-210ENST00000584997 RPL13AP40429 203 aaKnown RBP6.26□□□□□ -1.41
CASC3-210ENST00000584997 UBE2BP63146 152 aa6.26□□□□□ -1.41
CASC3-210ENST00000584997 KRTAP11-1Q8IUC1 163 aa6.26□□□□□ -1.41
CASC3-210ENST00000584997 LINC00469Q8N7U9 141 aa6.26□□□□□ -1.41
CASC3-210ENST00000584997 C2orf88Q9BSF0 95 aa6.26□□□□□ -1.41
CASC3-210ENST00000584997 IGLV5-39A0A0G2JS06 123 aa6.25□□□□□ -1.41
CASC3-210ENST00000584997 SMIM1B2RUZ4 78 aa6.25□□□□□ -1.41
CASC3-210ENST00000584997 LEPROTO15243 131 aa6.25□□□□□ -1.41
CASC3-210ENST00000584997 KRTAP1-4P0C5Y4 121 aa6.25□□□□□ -1.41
CASC3-210ENST00000584997 GAGE2EQ4V326 116 aa6.25□□□□□ -1.41
CASC3-210ENST00000584997 GAGE2DQ9UEU5 116 aa6.25□□□□□ -1.41
CASC3-210ENST00000584997 MYMXA0A1B0GTQ4 84 aa6.24□□□□□ -1.41
CASC3-210ENST00000584997 M0QXV9 152 aa6.24□□□□□ -1.41
CASC3-210ENST00000584997 TLX1NBP0CAT3 122 aa6.24□□□□□ -1.41
CASC3-210ENST00000584997 C10orf25Q5T742 122 aa6.24□□□□□ -1.41
CASC3-210ENST00000584997 UNQ6190/PRO20217Q6UXQ8 127 aa6.24□□□□□ -1.41
CASC3-210ENST00000584997 IGHV3OR16-9A0A0B4J2B5 98 aa6.23□□□□□ -1.41
CASC3-210ENST00000584997 ZNF815PA8K554 130 aa6.23□□□□□ -1.41
CASC3-210ENST00000584997 J3QQQ9 107 aa6.23□□□□□ -1.41
CASC3-210ENST00000584997 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
CASC3-210ENST00000584997 HINT1P49773 126 aaPredicted RBP6.23□□□□□ -1.41
CASC3-210ENST00000584997 HERVK_113P61574 105 aa6.23□□□□□ -1.41
CASC3-210ENST00000584997 HERVK_113P63121 156 aa6.23□□□□□ -1.41
CASC3-210ENST00000584997 GEMIN7Q9H840 131 aaKnown RBP6.23□□□□□ -1.41
CASC3-210ENST00000584997 C6orf48Q9UBA6 75 aa6.23□□□□□ -1.41
CASC3-210ENST00000584997 BVES-AS1Q5T3Y7 98 aa6.22□□□□□ -1.41
CASC3-210ENST00000584997 LITAFQ99732 161 aa6.21□□□□□ -1.42
CASC3-210ENST00000584997 HIGD1BQ9P298 99 aa6.21□□□□□ -1.42
CASC3-210ENST00000584997 TSPAN13O95857 204 aa6.2□□□□□ -1.42
CASC3-210ENST00000584997 LGALS3P17931 250 aaKnown RBP6.2□□□□□ -1.42
CASC3-210ENST00000584997 BATFQ16520 125 aa6.2□□□□□ -1.42
CASC3-210ENST00000584997 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
CASC3-210ENST00000584997 A0A0J9YXY3 114 aa6.19□□□□□ -1.42
CASC3-210ENST00000584997 TRBV30A0A0K0K1B3 111 aa6.19□□□□□ -1.42
CASC3-210ENST00000584997 NDUFC2-KCTD14E9PQ53 114 aa6.19□□□□□ -1.42
CASC3-210ENST00000584997 M0R143 59 aa6.19□□□□□ -1.42
CASC3-210ENST00000584997 FXYD2P54710 66 aa6.19□□□□□ -1.42
CASC3-210ENST00000584997 HSD52Q0P140 79 aa6.19□□□□□ -1.42
CASC3-210ENST00000584997 Q6ZVH6 145 aa6.19□□□□□ -1.42
CASC3-210ENST00000584997 ZNF625Q96I27 306 aaPredicted RBP6.19□□□□□ -1.42
CASC3-210ENST00000584997 H3BRM9 83 aa6.18□□□□□ -1.42
CASC3-210ENST00000584997 ZNF861PO60384 105 aa6.18□□□□□ -1.42
CASC3-210ENST00000584997 SEC11AP67812 179 aa6.18□□□□□ -1.42
CASC3-210ENST00000584997 ADAMTSL4-AS1Q5T5F5 129 aa6.18□□□□□ -1.42
CASC3-210ENST00000584997 C2orf82Q6UX34 121 aa6.18□□□□□ -1.42
CASC3-210ENST00000584997 NDUFA12Q9UI09 145 aa6.18□□□□□ -1.42
CASC3-210ENST00000584997 KIAA0087Q14695 138 aa6.17□□□□□ -1.42
CASC3-210ENST00000584997 C9orf129Q5T035 196 aaKnown RBP6.17□□□□□ -1.42
CASC3-210ENST00000584997 LCE2AQ5TA79 106 aaPredicted RBP6.17□□□□□ -1.42
CASC3-210ENST00000584997 COX7B2Q8TF08 81 aa6.17□□□□□ -1.42
CASC3-210ENST00000584997 K7ERJ3 54 aa6.15□□□□□ -1.42
CASC3-210ENST00000584997 CEND1Q8N111 149 aa6.15□□□□□ -1.42
CASC3-210ENST00000584997 LINC01561Q8N1V8 128 aa6.15□□□□□ -1.42
CASC3-210ENST00000584997 SPANXB1Q9NS25 103 aaPredicted RBP6.15□□□□□ -1.42
CASC3-210ENST00000584997 TOMM7Q9P0U1 55 aa6.15□□□□□ -1.42
CASC3-210ENST00000584997 A0A1B0GV90 55 aa6.14□□□□□ -1.43
CASC3-210ENST00000584997 TAX1BP3O14907 124 aa6.14□□□□□ -1.43
CASC3-210ENST00000584997 PRSS2P07478 247 aa6.14□□□□□ -1.43
CASC3-210ENST00000584997 SOSTDC1Q6X4U4 206 aa6.14□□□□□ -1.43
CASC3-210ENST00000584997 SCGB1D4Q6XE38 83 aa6.14□□□□□ -1.43
CASC3-210ENST00000584997 DAND5Q8N907 189 aa6.14□□□□□ -1.43
CASC3-210ENST00000584997 TYMSOSQ8TAI1 123 aa6.14□□□□□ -1.43
CASC3-210ENST00000584997 FAT4Q6V0I7 4981 aa6.13□□□□□ -1.43
CASC3-210ENST00000584997 A0A087X002 238 aa6.13□□□□□ -1.43
CASC3-210ENST00000584997 CRYGAP11844 174 aa6.13□□□□□ -1.43
CASC3-210ENST00000584997 RPL28P46779 137 aaKnown RBP6.13□□□□□ -1.43
CASC3-210ENST00000584997 CKS1BP61024 79 aa6.13□□□□□ -1.43
CASC3-210ENST00000584997 TAL2Q16559 108 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms