RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 LINC00528Q8N1L1 170 aa3.94□□□□□ -1.78
RTTN-209ENST00000583043 LRRK2Q5S007 2527 aa3.93□□□□□ -1.78
RTTN-209ENST00000583043 SORL1Q92673 2214 aa3.93□□□□□ -1.78
RTTN-209ENST00000583043 TRBV7-4A0A0J9YYF1 115 aa3.93□□□□□ -1.78
RTTN-209ENST00000583043 Q8N3U1 123 aa3.93□□□□□ -1.78
RTTN-209ENST00000583043 ZNF292O60281 2723 aa3.93□□□□□ -1.78
RTTN-209ENST00000583043 Q8NBF4 154 aa3.93□□□□□ -1.78
RTTN-209ENST00000583043 C22orf24Q9Y442 160 aa3.93□□□□□ -1.78
RTTN-209ENST00000583043 C16orf90A8MZG2 172 aa3.92□□□□□ -1.78
RTTN-209ENST00000583043 PRR3P79522 188 aaKnown RBP3.92□□□□□ -1.78
RTTN-209ENST00000583043 SPTBN4Q9H254 2564 aa3.92□□□□□ -1.78
RTTN-209ENST00000583043 IGKV2-24A0A0C4DH68 120 aa3.92□□□□□ -1.78
RTTN-209ENST00000583043 ANKRD17O75179 2603 aaKnown RBP3.92□□□□□ -1.78
RTTN-209ENST00000583043 XIRP2A4UGR9 3374 aa3.92□□□□□ -1.78
RTTN-209ENST00000583043 PRB2P02812 416 aaPredicted RBP3.92□□□□□ -1.78
RTTN-209ENST00000583043 KRTAP10-3P60369 221 aa3.92□□□□□ -1.78
RTTN-209ENST00000583043 KRTAP24-1Q3LI83 254 aa3.92□□□□□ -1.78
RTTN-209ENST00000583043 WWC2-AS2Q96NR7 200 aa3.91□□□□□ -1.78
RTTN-209ENST00000583043 RETNQ9HD89 108 aa3.91□□□□□ -1.78
RTTN-209ENST00000583043 CHD8Q9HCK8 2581 aa3.91□□□□□ -1.78
RTTN-209ENST00000583043 TM2D3Q9BRN9 247 aa3.91□□□□□ -1.78
RTTN-209ENST00000583043 hDV103S1A0JD37 113 aa3.9□□□□□ -1.78
RTTN-209ENST00000583043 K7ERS5 55 aa3.9□□□□□ -1.78
RTTN-209ENST00000583043 TP53AIP1Q9HCN2 124 aa3.9□□□□□ -1.78
RTTN-209ENST00000583043 C2CD3Q4AC94 2353 aa3.9□□□□□ -1.79
RTTN-209ENST00000583043 Q6ZRP5 223 aa3.9□□□□□ -1.79
RTTN-209ENST00000583043 TMEM254Q8TBM7 123 aa3.9□□□□□ -1.79
RTTN-209ENST00000583043 IGLV1-50A0A075B6I6 118 aa3.9□□□□□ -1.79
RTTN-209ENST00000583043 NOTCH2Q04721 2471 aa3.89□□□□□ -1.79
RTTN-209ENST00000583043 CNBPP62633 177 aaKnown RBP3.89□□□□□ -1.79
RTTN-209ENST00000583043 REV3LO60673 3130 aa3.89□□□□□ -1.79
RTTN-209ENST00000583043 C15orf56Q8N910 161 aa3.89□□□□□ -1.79
RTTN-209ENST00000583043 LINC00588Q9Y4M8 146 aa3.89□□□□□ -1.79
RTTN-209ENST00000583043 C3orf84H3BNL1 204 aa3.89□□□□□ -1.79
RTTN-209ENST00000583043 UNC80Q8N2C7 3258 aa3.89□□□□□ -1.79
RTTN-209ENST00000583043 HCG22E2RYF7 251 aa3.89□□□□□ -1.79
RTTN-209ENST00000583043 Q9BRP9 147 aa3.88□□□□□ -1.79
RTTN-209ENST00000583043 A0A0C4DFX4 3053 aa3.88□□□□□ -1.79
RTTN-209ENST00000583043 A0A087WVE0 104 aa3.88□□□□□ -1.79
RTTN-209ENST00000583043 H0Y9J4 135 aa3.88□□□□□ -1.79
RTTN-209ENST00000583043 DNAH14Q0VDD8 3507 aa3.88□□□□□ -1.79
RTTN-209ENST00000583043 ABCA12Q86UK0 2595 aa3.88□□□□□ -1.79
RTTN-209ENST00000583043 KLKP1Q107X0 134 aa3.88□□□□□ -1.79
RTTN-209ENST00000583043 IGLV5-48A0A075B6I7 105 aa3.87□□□□□ -1.79
RTTN-209ENST00000583043 SMCR5Q8TEV8 140 aa3.87□□□□□ -1.79
RTTN-209ENST00000583043 PLA2G1BP04054 148 aaKnown RBP3.87□□□□□ -1.79
RTTN-209ENST00000583043 MKI67P46013 3256 aaKnown RBP3.87□□□□□ -1.79
RTTN-209ENST00000583043 SONP18583 2426 aaKnown RBP3.87□□□□□ -1.79
RTTN-209ENST00000583043 ABCA2Q9BZC7 2435 aa3.87□□□□□ -1.79
RTTN-209ENST00000583043 VCANP13611 3396 aa3.87□□□□□ -1.79
RTTN-209ENST00000583043 TLN2Q9Y4G6 2542 aa3.87□□□□□ -1.79
RTTN-209ENST00000583043 SCXQ7RTU7 201 aa3.86□□□□□ -1.79
RTTN-209ENST00000583043 NBDYA0A0U1RRE5 68 aa3.86□□□□□ -1.79
RTTN-209ENST00000583043 BRK1Q8WUW1 75 aa3.86□□□□□ -1.79
RTTN-209ENST00000583043 NDUFS5O43920 106 aa3.85□□□□□ -1.79
RTTN-209ENST00000583043 SVIPQ8NHG7 77 aa3.85□□□□□ -1.79
RTTN-209ENST00000583043 CASC2Q6XLA1 102 aa3.85□□□□□ -1.79
RTTN-209ENST00000583043 KRTAP10-11P60412 298 aa3.85□□□□□ -1.79
RTTN-209ENST00000583043 C1orf134Q5TEV5 83 aa3.85□□□□□ -1.79
RTTN-209ENST00000583043 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.85□□□□□ -1.79
RTTN-209ENST00000583043 MOBPQ13875 183 aa3.84□□□□□ -1.79
RTTN-209ENST00000583043 CR1P17927 2039 aa3.84□□□□□ -1.79
RTTN-209ENST00000583043 FAM30AQ9NZY2 134 aa3.84□□□□□ -1.8
RTTN-209ENST00000583043 A0A087WSZ3 146 aa3.83□□□□□ -1.8
RTTN-209ENST00000583043 COX6B2Q6YFQ2 88 aa3.83□□□□□ -1.8
RTTN-209ENST00000583043 SPRR1AP35321 89 aa3.83□□□□□ -1.8
RTTN-209ENST00000583043 C9orf129Q5T035 196 aaKnown RBP3.83□□□□□ -1.8
RTTN-209ENST00000583043 LIMD2Q9BT23 127 aa3.83□□□□□ -1.8
RTTN-209ENST00000583043 CDH23Q9H251 3354 aa3.83□□□□□ -1.8
RTTN-209ENST00000583043 C9orf163Q8N9P6 203 aa3.83□□□□□ -1.8
RTTN-209ENST00000583043 LINC00476Q8WZB0 136 aa3.83□□□□□ -1.8
RTTN-209ENST00000583043 SNURFQ9Y675 71 aa3.82□□□□□ -1.8
RTTN-209ENST00000583043 PRR15LQ9BU68 103 aa3.82□□□□□ -1.8
RTTN-209ENST00000583043 IGLV5-52A0A0A0MRZ9 124 aa3.82□□□□□ -1.8
RTTN-209ENST00000583043 K7EIL1 84 aa3.82□□□□□ -1.8
RTTN-209ENST00000583043 SPRR4Q96PI1 79 aa3.82□□□□□ -1.8
RTTN-209ENST00000583043 MDFIQ99750 246 aa3.82□□□□□ -1.8
RTTN-209ENST00000583043 CHKB-CPT1BH3BT56 60 aa3.82□□□□□ -1.8
RTTN-209ENST00000583043 C8orf87E5RJ46 101 aa3.81□□□□□ -1.8
RTTN-209ENST00000583043 WFDC13Q8IUB5 93 aa3.81□□□□□ -1.8
RTTN-209ENST00000583043 Q8N377 158 aa3.81□□□□□ -1.8
RTTN-209ENST00000583043 A8MWP4 228 aa3.81□□□□□ -1.8
RTTN-209ENST00000583043 IGLV8-61A0A075B6I0 122 aa3.81□□□□□ -1.8
RTTN-209ENST00000583043 SERTAD4-AS1Q5TG53 156 aa3.81□□□□□ -1.8
RTTN-209ENST00000583043 Q8N9L7 120 aa3.81□□□□□ -1.8
RTTN-209ENST00000583043 SZT2Q5T011 3432 aa3.8□□□□□ -1.8
RTTN-209ENST00000583043 C5orf42Q9H799 3197 aa3.8□□□□□ -1.8
RTTN-209ENST00000583043 SEC61GP60059 68 aa3.8□□□□□ -1.8
RTTN-209ENST00000583043 SPRR1BP22528 89 aa3.8□□□□□ -1.8
RTTN-209ENST00000583043 C1orf195Q5TG92 126 aa3.8□□□□□ -1.8
RTTN-209ENST00000583043 APLNQ9ULZ1 77 aa3.8□□□□□ -1.8
RTTN-209ENST00000583043 EPM2AB3EWF7 344 aa3.8□□□□□ -1.8
RTTN-209ENST00000583043 IGKV4-1P06312 121 aa3.8□□□□□ -1.8
RTTN-209ENST00000583043 SPTSSBQ8NFR3 76 aa3.8□□□□□ -1.8
RTTN-209ENST00000583043 KRTAP26-1Q6PEX3 210 aa3.8□□□□□ -1.8
RTTN-209ENST00000583043 H0Y9P7 68 aa3.79□□□□□ -1.8
RTTN-209ENST00000583043 SSBP3-AS1Q7Z2R9 100 aa3.79□□□□□ -1.8
RTTN-209ENST00000583043 LINC00208Q96KT6 92 aa3.79□□□□□ -1.8
RTTN-209ENST00000583043 A0A096LNI7 61 aa3.79□□□□□ -1.8
RTTN-209ENST00000583043 PRLHP81277 87 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms