RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	COMMD7	Q86VX2	200 aa		6.71	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	PLEKHB2	Q96CS7	222 aa		6.71	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	HIGD2A	Q9BW72	106 aa		6.71	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	HBD	P02042	147 aa		6.7	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	LINC00614	P0C842	121 aa		6.7	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	LINC00158	P58513	81 aa		6.7	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	COX17	Q14061	63 aa		6.7	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	BAGE3	Q86Y29	109 aa		6.7	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	C18orf32	Q8TCD1	76 aa		6.7	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	KRTAP9-2	Q9BYQ4	174 aa		6.7	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	TRAPPC1	Q9Y5R8	145 aa		6.7	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	TPRXL	Q17RH7	258 aa		6.68	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	RHEB	Q15382	184 aa		6.67	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	LCE2A	Q5TA79	106 aa	Predicted RBP	6.67	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	PPDPF	Q9H3Y8	114 aa		6.67	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	MUC17	Q685J3	4493 aa		6.67	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	FAT4	Q6V0I7	4981 aa		6.67	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	SPRR4	Q96PI1	79 aa		6.66	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	CHTOP	Q9Y3Y2	248 aa	Known RBP	6.66	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	NCR3	O14931	201 aa		6.65	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	SMIM13	P0DJ93	91 aa		6.65	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	C10orf91	Q5T1B1	145 aa		6.65	□□□□□ -1.34
CDK5RAP3-223	ENST00000582114	TMEM223	A0PJW6	202 aa		6.64	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	ATP6V1G1	O75348	118 aa		6.64	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	SFTA2	Q6UW10	78 aa		6.64	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	DAND5	Q8N907	189 aa		6.64	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	MEIG1	Q5JSS6	88 aa		6.63	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	LCE2D	Q5TA82	110 aa	Predicted RBP	6.63	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	BOD1L2	Q8IYS8	172 aa		6.63	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	MIR7-3HG	Q8N6C7	128 aa		6.62	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114		Q8NBF4	154 aa		6.62	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	IFI27L1	Q96BM0	104 aa		6.62	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	PRY	O14603	147 aa		6.61	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	SPAG11A	Q6PDA7	123 aa		6.61	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	SMCR5	Q8TEV8	140 aa		6.61	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	ZNF706	Q9Y5V0	76 aa	Predicted RBP	6.61	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	ETDC	A0A1B0GVM5	59 aa		6.6	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114		H0Y8G0	127 aa		6.6	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	APOC3	P02656	99 aa		6.6	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	CTAG1A	P78358	180 aa		6.6	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	TRAV12-1	A0A0B4J245	112 aa		6.59	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	TRBV10-3	A0A0K0K1G6	114 aa		6.59	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	LINC00337	Q8N6G1	96 aa		6.59	□□□□□ -1.35
CDK5RAP3-223	ENST00000582114	SPRR1A	P35321	89 aa		6.58	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	GAGE2A	Q6NT46	116 aa		6.58	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	FP248	Q71RG6	208 aa	Predicted RBP	6.58	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	KCNQ1DN	Q9H478	68 aa		6.58	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	NDUFA12	Q9UI09	145 aa		6.58	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	IGLV9-49	A0A0B4J1Y8	123 aa		6.57	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.57	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	HERV-K104	P63124	156 aa		6.57	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	FAM19A2	Q8N3H0	131 aa		6.57	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	CHCHD1	Q96BP2	118 aa	Known RBP	6.57	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	KRTAP3-3	Q9BYR6	98 aa		6.57	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	KRTAP3-2	Q9BYR7	98 aa		6.57	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	ERC2-IT1	O76042	136 aa		6.56	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	TSPEAR-AS2	P59090	65 aa		6.56	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	MOBP	Q13875	183 aa		6.56	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	KRTAP13-3	Q3SY46	172 aa		6.56	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	MYMX	A0A1B0GTQ4	84 aa		6.55	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	SNAPIN	O95295	136 aa		6.55	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	SVBP	Q8N300	66 aa		6.55	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114		A6NJY4	79 aa		6.54	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114		B5MCH6	92 aa		6.54	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	SPINK1	P00995	79 aa		6.54	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	NDUFA5	Q16718	116 aa		6.54	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	LINC00483	Q53H64	154 aa		6.54	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	YPEL4	Q96NS1	127 aa		6.54	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	MAP1LC3C	Q9BXW4	147 aa		6.54	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	LINC00587	B1AMM8	73 aa		6.53	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	HSBP1	O75506	76 aa		6.53	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	DDT	P30046	118 aa		6.53	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	S100A12	P80511	92 aa		6.53	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	KRTAP4-1	Q9BYQ7	146 aa		6.53	□□□□□ -1.36
CDK5RAP3-223	ENST00000582114	KRTAP9-6	A0A140TA67	174 aa		6.52	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	ASB16-AS1	Q495Z4	193 aa		6.52	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114		Q9BRP9	147 aa		6.52	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	LEPROT	O15243	131 aa		6.51	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114		Q8N377	158 aa		6.51	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	PMCHL2	Q9BQD1	86 aa		6.51	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	NPC2	P61916	151 aa		6.5	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	TRBV10-2	A0A0K0K1G8	114 aa		6.49	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114		J3QQQ9	107 aa		6.49	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	LEPROTL1	O95214	131 aa		6.49	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	S100A7L2	Q5SY68	101 aa		6.49	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	C9orf153	Q5TBE3	101 aa		6.49	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114		Q6ZRX8	168 aa		6.49	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	MIEN1	Q9BRT3	115 aa		6.49	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	SERF1A	O75920	110 aa		6.48	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	TRGC2	P03986	189 aa		6.48	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	FABP4	P15090	132 aa		6.48	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	LGALS3	P17931	250 aa	Known RBP	6.48	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	LINC00310	P59036	64 aa		6.48	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	SEC61B	P60468	96 aa	Known RBP	6.48	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	SSBP3-AS1	Q7Z2R9	100 aa		6.48	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	SPANXB1	Q9NS25	103 aa	Predicted RBP	6.48	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	TRAV23DV6	A0A075B6W5	121 aa		6.47	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	LOC107984156	A0A0G2JMH3	177 aa		6.47	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	PLN	P26678	52 aa		6.47	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	LINC01547	P58512	204 aa	Predicted RBP	6.47	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms