RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 IGKV2D-24A0A075B6R9 120 aa4.11□□□□□ -1.75
PTPRM-213ENST00000580949 NUPR2A6NF83 97 aa4.11□□□□□ -1.75
PTPRM-213ENST00000580949 C9orf116Q5BN46 136 aaPredicted RBP4.11□□□□□ -1.75
PTPRM-213ENST00000580949 UNQ6190/PRO20217Q6UXQ8 127 aa4.11□□□□□ -1.75
PTPRM-213ENST00000580949 C15orf56Q8N910 161 aa4.11□□□□□ -1.75
PTPRM-213ENST00000580949 H3BUT2 72 aa4.1□□□□□ -1.75
PTPRM-213ENST00000580949 APOMO95445 188 aa4.1□□□□□ -1.75
PTPRM-213ENST00000580949 IFITM1P13164 125 aa4.1□□□□□ -1.75
PTPRM-213ENST00000580949 PFN2P35080 140 aa4.1□□□□□ -1.75
PTPRM-213ENST00000580949 LINC00158P58513 81 aa4.1□□□□□ -1.75
PTPRM-213ENST00000580949 CKS1BP61024 79 aa4.1□□□□□ -1.75
PTPRM-213ENST00000580949 SPAG11BQ08648 103 aa4.1□□□□□ -1.75
PTPRM-213ENST00000580949 CIRBPQ14011 172 aaKnown RBP4.1□□□□□ -1.75
PTPRM-213ENST00000580949 HIGD2BQ4VC39 106 aa4.1□□□□□ -1.75
PTPRM-213ENST00000580949 MEIG1Q5JSS6 88 aa4.1□□□□□ -1.75
PTPRM-213ENST00000580949 MIR7-3HGQ8N6C7 128 aa4.1□□□□□ -1.75
PTPRM-213ENST00000580949 ERG28Q9UKR5 140 aa4.1□□□□□ -1.75
PTPRM-213ENST00000580949 STARD9Q9P2P6 4700 aa4.09□□□□□ -1.75
PTPRM-213ENST00000580949 DNAH1Q9P2D7 4330 aa4.09□□□□□ -1.75
PTPRM-213ENST00000580949 SEC61BP60468 96 aaKnown RBP4.09□□□□□ -1.75
PTPRM-213ENST00000580949 RPL24P83731 157 aaKnown RBP4.09□□□□□ -1.75
PTPRM-213ENST00000580949 UBE2DNLQ8IWF7 75 aa4.09□□□□□ -1.75
PTPRM-213ENST00000580949 PRR26Q8N8Z3 221 aa4.09□□□□□ -1.75
PTPRM-213ENST00000580949 VPS13DQ5THJ4 4388 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 GVQW2A0A096LPI5 108 aaPredicted RBP4.08□□□□□ -1.76
PTPRM-213ENST00000580949 A0A0B4J2C4 111 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 TSPAN13O95857 204 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 TGP01266 2768 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 CXCL5P42830 114 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 WFDC2Q14508 124 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 SFTA2Q6UW10 78 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 CSMD3Q7Z407 3707 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 C6orf48Q9UBA6 75 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 PRO1854Q9UHT4 67 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 DNAH7Q8WXX0 4024 aa4.08□□□□□ -1.76
PTPRM-213ENST00000580949 IGKV2D-30A0A075B6S6 120 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.07□□□□□ -1.76
PTPRM-213ENST00000580949 LOC107984156A0A0G2JMH3 177 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 A0A1W2PPM0 123 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 LECT2O14960 151 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 VAMP3Q15836 100 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 Q6ZRU5 148 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 Q75L30 129 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 ARL17AQ8IVW1 177 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 Q8NDZ9 215 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 MUC7Q8TAX7 377 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 C2orf48Q96LS8 159 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 SND1-IT1Q9HBX3 110 aa4.07□□□□□ -1.76
PTPRM-213ENST00000580949 IGKV2-28A0A075B6P5 120 aa4.06□□□□□ -1.76
PTPRM-213ENST00000580949 NBDYA0A0U1RRE5 68 aa4.06□□□□□ -1.76
PTPRM-213ENST00000580949 H7C2G1 150 aa4.06□□□□□ -1.76
PTPRM-213ENST00000580949 IGKV2D-28P01615 120 aa4.06□□□□□ -1.76
PTPRM-213ENST00000580949 PRR3P79522 188 aaKnown RBP4.06□□□□□ -1.76
PTPRM-213ENST00000580949 COX17Q14061 63 aa4.06□□□□□ -1.76
PTPRM-213ENST00000580949 RMI2Q96E14 147 aa4.06□□□□□ -1.76
PTPRM-213ENST00000580949 FABP2P12104 132 aa4.05□□□□□ -1.76
PTPRM-213ENST00000580949 Q6ZRN7 208 aaPredicted RBP4.05□□□□□ -1.76
PTPRM-213ENST00000580949 LINC00337Q8N6G1 96 aa4.05□□□□□ -1.76
PTPRM-213ENST00000580949 CAMK2N2Q96S95 79 aa4.05□□□□□ -1.76
PTPRM-213ENST00000580949 TRBV30A0A0K0K1B3 111 aa4.04□□□□□ -1.76
PTPRM-213ENST00000580949 F8WDY8 70 aa4.04□□□□□ -1.76
PTPRM-213ENST00000580949 K7EP34 96 aa4.04□□□□□ -1.76
PTPRM-213ENST00000580949 M0R2N4 97 aa4.04□□□□□ -1.76
PTPRM-213ENST00000580949 RPL13AP40429 203 aaKnown RBP4.04□□□□□ -1.76
PTPRM-213ENST00000580949 SYCNQ0VAF6 134 aa4.04□□□□□ -1.76
PTPRM-213ENST00000580949 COPS9Q8WXC6 57 aa4.04□□□□□ -1.76
PTPRM-213ENST00000580949 XAGE1AQ9HD64 81 aa4.04□□□□□ -1.76
PTPRM-213ENST00000580949 SPCS1Q9Y6A9 102 aa4.04□□□□□ -1.76
PTPRM-213ENST00000580949 LRCOL1A6NCL2 159 aa4.03□□□□□ -1.76
PTPRM-213ENST00000580949 Q6ZR54 194 aa4.03□□□□□ -1.76
PTPRM-213ENST00000580949 DNAH10Q8IVF4 4471 aa4.02□□□□□ -1.77
PTPRM-213ENST00000580949 NDUFC2-KCTD14E9PQ53 114 aa4.02□□□□□ -1.77
PTPRM-213ENST00000580949 TCL1BO95988 128 aa4.02□□□□□ -1.77
PTPRM-213ENST00000580949 TTC32Q5I0X7 151 aa4.02□□□□□ -1.77
PTPRM-213ENST00000580949 Q6ZRP5 223 aa4.02□□□□□ -1.77
PTPRM-213ENST00000580949 CARD19Q96LW7 228 aa4.02□□□□□ -1.77
PTPRM-213ENST00000580949 LYSTQ99698 3801 aa4.01□□□□□ -1.77
PTPRM-213ENST00000580949 TRAV13-2A0A0B4J235 113 aa4.01□□□□□ -1.77
PTPRM-213ENST00000580949 KRTAP29-1A8MX34 341 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-213ENST00000580949 H3BMG7 143 aa4.01□□□□□ -1.77
PTPRM-213ENST00000580949 PSCAO43653 123 aa4.01□□□□□ -1.77
PTPRM-213ENST00000580949 NDUFC2O95298 119 aa4.01□□□□□ -1.77
PTPRM-213ENST00000580949 PSMB2P49721 201 aa4.01□□□□□ -1.77
PTPRM-213ENST00000580949 Q1RN00 199 aa4.01□□□□□ -1.77
PTPRM-213ENST00000580949 C9orf129Q5T035 196 aaKnown RBP4.01□□□□□ -1.77
PTPRM-213ENST00000580949 GTF2H5Q6ZYL4 71 aa4.01□□□□□ -1.77
PTPRM-213ENST00000580949 SMIM11BQ8TCY0 68 aa4.01□□□□□ -1.77
PTPRM-213ENST00000580949 NCR3O14931 201 aa4□□□□□ -1.77
PTPRM-213ENST00000580949 TLX1NBP0CAT3 122 aa4□□□□□ -1.77
PTPRM-213ENST00000580949 SCGB1C2P0DMR2 95 aa4□□□□□ -1.77
PTPRM-213ENST00000580949 RPL28P46779 137 aaKnown RBP4□□□□□ -1.77
PTPRM-213ENST00000580949 CNBPP62633 177 aaKnown RBP4□□□□□ -1.77
PTPRM-213ENST00000580949 KRTAP7-1Q8IUC3 87 aa4□□□□□ -1.77
PTPRM-213ENST00000580949 CLEC2BQ92478 149 aa4□□□□□ -1.77
PTPRM-213ENST00000580949 PRO0461Q9UI25 63 aa4□□□□□ -1.77
PTPRM-213ENST00000580949 C3orf84H3BNL1 204 aa3.99□□□□□ -1.77
PTPRM-213ENST00000580949 LY6G6CO95867 125 aa3.99□□□□□ -1.77
PTPRM-213ENST00000580949 RPL18AQ02543 176 aaKnown RBP3.99□□□□□ -1.77
PTPRM-213ENST00000580949 MTURNQ8N3F0 131 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms