RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 NRAPQ86VF7 1730 aa2.22□□□□□ -2.05
SMG8-205ENST00000580798 CR1P17927 2039 aa2.22□□□□□ -2.05
SMG8-205ENST00000580798 BAZ2BQ9UIF8 2168 aaKnown RBP2.22□□□□□ -2.05
SMG8-205ENST00000580798 KIAA0100Q14667 2235 aaKnown RBP2.21□□□□□ -2.06
SMG8-205ENST00000580798 CUL9Q8IWT3 2517 aa2.21□□□□□ -2.06
SMG8-205ENST00000580798 IGKV2D-24A0A075B6R9 120 aa2.21□□□□□ -2.06
SMG8-205ENST00000580798 LINC00304Q8N9R0 145 aa2.21□□□□□ -2.06
SMG8-205ENST00000580798 MDC1Q14676 2089 aaKnown RBP2.21□□□□□ -2.06
SMG8-205ENST00000580798 TOGARAM1Q9Y4F4 1720 aa2.2□□□□□ -2.06
SMG8-205ENST00000580798 SPAG17Q6Q759 2223 aa2.2□□□□□ -2.06
SMG8-205ENST00000580798 M0R2N4 97 aa2.2□□□□□ -2.06
SMG8-205ENST00000580798 TPRXLQ17RH7 258 aa2.2□□□□□ -2.06
SMG8-205ENST00000580798 SMIM2Q9BVW6 85 aa2.2□□□□□ -2.06
SMG8-205ENST00000580798 INTS1Q8N201 2190 aaKnown RBP2.19□□□□□ -2.06
SMG8-205ENST00000580798 ZNF831Q5JPB2 1677 aa2.19□□□□□ -2.06
SMG8-205ENST00000580798 DEFB131BA0A096LNP1 70 aa2.19□□□□□ -2.06
SMG8-205ENST00000580798 SSBP3-AS1Q7Z2R9 100 aa2.19□□□□□ -2.06
SMG8-205ENST00000580798 Q8N9L7 120 aa2.19□□□□□ -2.06
SMG8-205ENST00000580798 SPACA4Q8TDM5 124 aa2.19□□□□□ -2.06
SMG8-205ENST00000580798 C4AP0C0L4 1744 aa2.19□□□□□ -2.06
SMG8-205ENST00000580798 NCOA6Q14686 2063 aaPredicted RBP2.19□□□□□ -2.06
SMG8-205ENST00000580798 MED12Q93074 2177 aa2.19□□□□□ -2.06
SMG8-205ENST00000580798 CPSF4LA6NMK7 179 aaKnown RBP2.18□□□□□ -2.06
SMG8-205ENST00000580798 COL5A1P20908 1838 aaPredicted RBP2.17□□□□□ -2.06
SMG8-205ENST00000580798 SPTY2D1-AS1A0A0U1RR47 76 aa2.17□□□□□ -2.06
SMG8-205ENST00000580798 IAPPP10997 89 aa2.17□□□□□ -2.06
SMG8-205ENST00000580798 LINC00315P59091 139 aa2.17□□□□□ -2.06
SMG8-205ENST00000580798 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.17□□□□□ -2.06
SMG8-205ENST00000580798 SMIM11BQ8TCY0 68 aa2.17□□□□□ -2.06
SMG8-205ENST00000580798 TET1Q8NFU7 2136 aa2.17□□□□□ -2.06
SMG8-205ENST00000580798 IGKV2-28A0A075B6P5 120 aa2.16□□□□□ -2.06
SMG8-205ENST00000580798 IGKV2-24A0A0C4DH68 120 aa2.16□□□□□ -2.06
SMG8-205ENST00000580798 IGKV2D-28P01615 120 aa2.16□□□□□ -2.06
SMG8-205ENST00000580798 LINC00158P58513 81 aa2.16□□□□□ -2.06
SMG8-205ENST00000580798 TFF3Q07654 80 aa2.16□□□□□ -2.06
SMG8-205ENST00000580798 ESPL1Q14674 2120 aa2.16□□□□□ -2.06
SMG8-205ENST00000580798 LINC00308Q8TCZ7 52 aa2.16□□□□□ -2.06
SMG8-205ENST00000580798 CCL19Q99731 98 aa2.16□□□□□ -2.06
SMG8-205ENST00000580798 CACNA1DQ01668 2161 aa2.15□□□□□ -2.07
SMG8-205ENST00000580798 ARHGAP32A7KAX9 2087 aa2.15□□□□□ -2.07
SMG8-205ENST00000580798 Q6ZRX8 168 aa2.15□□□□□ -2.07
SMG8-205ENST00000580798 PLAC4Q8WY50 150 aa2.15□□□□□ -2.07
SMG8-205ENST00000580798 DNAJC13O75165 2243 aa2.15□□□□□ -2.07
SMG8-205ENST00000580798 COL4A5P29400 1685 aa2.15□□□□□ -2.07
SMG8-205ENST00000580798 LRRC37A2A6NM11 1700 aa2.14□□□□□ -2.07
SMG8-205ENST00000580798 PRRC2BQ5JSZ5 2229 aaKnown RBP2.14□□□□□ -2.07
SMG8-205ENST00000580798 NDUFA1O15239 70 aa2.14□□□□□ -2.07
SMG8-205ENST00000580798 LY6G6CO95867 125 aa2.14□□□□□ -2.07
SMG8-205ENST00000580798 ARHGAP5-AS1Q96IT6 56 aa2.14□□□□□ -2.07
SMG8-205ENST00000580798 CNFNQ9BYD5 112 aa2.14□□□□□ -2.07
SMG8-205ENST00000580798 ARFGEF3Q5TH69 2177 aa2.12□□□□□ -2.07
SMG8-205ENST00000580798 COL27A1Q8IZC6 1860 aaPredicted RBP2.12□□□□□ -2.07
SMG8-205ENST00000580798 C4BP0C0L5 1744 aa2.12□□□□□ -2.07
SMG8-205ENST00000580798 ANGP03950 147 aaKnown RBP2.12□□□□□ -2.07
SMG8-205ENST00000580798 CRIP1P50238 77 aa2.12□□□□□ -2.07
SMG8-205ENST00000580798 C10orf99Q6UWK7 81 aa2.12□□□□□ -2.07
SMG8-205ENST00000580798 Q8IZM0 81 aa2.12□□□□□ -2.07
SMG8-205ENST00000580798 SPINK13Q1W4C9 94 aa2.11□□□□□ -2.07
SMG8-205ENST00000580798 RPS27LQ71UM5 84 aaKnown RBP2.11□□□□□ -2.07
SMG8-205ENST00000580798 A0A0G2JMZ2 1700 aa2.11□□□□□ -2.07
SMG8-205ENST00000580798 LRRC37AA6NMS7 1700 aa2.11□□□□□ -2.07
SMG8-205ENST00000580798 PRB1P04280 392 aa2.1□□□□□ -2.07
SMG8-205ENST00000580798 CRIPTQ9P021 101 aa2.1□□□□□ -2.07
SMG8-205ENST00000580798 CDKN2A-AS1Q9UH64 79 aa2.1□□□□□ -2.07
SMG8-205ENST00000580798 RP1P56715 2156 aa2.1□□□□□ -2.07
SMG8-205ENST00000580798 PRR14LQ5THK1 2151 aa2.1□□□□□ -2.07
SMG8-205ENST00000580798 GVQW2A0A096LPI5 108 aaPredicted RBP2.09□□□□□ -2.07
SMG8-205ENST00000580798 PRR9Q5T870 116 aa2.09□□□□□ -2.07
SMG8-205ENST00000580798 DOCK10Q96BY6 2186 aa2.09□□□□□ -2.08
SMG8-205ENST00000580798 G3V318 75 aa2.08□□□□□ -2.08
SMG8-205ENST00000580798 TTTY10Q9BZA0 68 aa2.08□□□□□ -2.08
SMG8-205ENST00000580798 TP53AIP1Q9HCN2 124 aa2.08□□□□□ -2.08
SMG8-205ENST00000580798 CEP192Q8TEP8 1941 aa2.08□□□□□ -2.08
SMG8-205ENST00000580798 SDK1Q7Z5N4 2213 aa2.07□□□□□ -2.08
SMG8-205ENST00000580798 UNC13CQ8NB66 2214 aa2.07□□□□□ -2.08
SMG8-205ENST00000580798 ABCA4P78363 2273 aa2.07□□□□□ -2.08
SMG8-205ENST00000580798 A0A096LNT2 108 aa2.07□□□□□ -2.08
SMG8-205ENST00000580798 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
SMG8-205ENST00000580798 UBE2DNLQ8IWF7 75 aa2.06□□□□□ -2.08
SMG8-205ENST00000580798 USMG5Q96IX5 58 aa2.06□□□□□ -2.08
SMG8-205ENST00000580798 COL4A2P08572 1712 aa2.05□□□□□ -2.08
SMG8-205ENST00000580798 LINC01590Q5TEZ4 76 aa2.05□□□□□ -2.08
SMG8-205ENST00000580798 PLXNB2O15031 1838 aa2.05□□□□□ -2.08
SMG8-205ENST00000580798 LOC730098B7Z3J9 87 aa2.04□□□□□ -2.08
SMG8-205ENST00000580798 TNCP24821 2201 aa2.04□□□□□ -2.08
SMG8-205ENST00000580798 PRB3Q04118 309 aaPredicted RBP2.04□□□□□ -2.08
SMG8-205ENST00000580798 LINC00575Q6W349 94 aa2.04□□□□□ -2.08
SMG8-205ENST00000580798 COX6B2Q6YFQ2 88 aa2.04□□□□□ -2.08
SMG8-205ENST00000580798 LYNX1G3V0Z9 82 aa2.03□□□□□ -2.08
SMG8-205ENST00000580798 KRTAP13-2Q52LG2 175 aa2.03□□□□□ -2.08
SMG8-205ENST00000580798 MINOS1Q5TGZ0 78 aa2.03□□□□□ -2.08
SMG8-205ENST00000580798 Q6ZRN7 208 aaPredicted RBP2.02□□□□□ -2.09
SMG8-205ENST00000580798 SEC16AO15027 2179 aa2.02□□□□□ -2.09
SMG8-205ENST00000580798 KMT2BQ9UMN6 2715 aaPredicted RBP2.01□□□□□ -2.09
SMG8-205ENST00000580798 FREM1Q5H8C1 2179 aa2.01□□□□□ -2.09
SMG8-205ENST00000580798 K7EQZ3 153 aa2.01□□□□□ -2.09
SMG8-205ENST00000580798 CCL22O00626 93 aa2.01□□□□□ -2.09
SMG8-205ENST00000580798 PRO3102Q9H379 93 aa2.01□□□□□ -2.09
SMG8-205ENST00000580798 C6orf48Q9UBA6 75 aa2.01□□□□□ -2.09
SMG8-205ENST00000580798 POLR2KP53803 58 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms