RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 AKR1C3P42330 323 aa2.9□□□□□ -1.95
PTPRM-208ENST00000578600 CRIP1P50238 77 aa2.9□□□□□ -1.95
PTPRM-208ENST00000578600 PHF5AQ7RTV0 110 aaKnown RBP2.9□□□□□ -1.95
PTPRM-208ENST00000578600 LINC00304Q8N9R0 145 aa2.9□□□□□ -1.95
PTPRM-208ENST00000578600 PPP1R1CQ8WVI7 109 aa2.9□□□□□ -1.95
PTPRM-208ENST00000578600 BORCS7-ASMTA0A0B4J1R7 106 aa2.89□□□□□ -1.95
PTPRM-208ENST00000578600 CTXND1A0A1B0GTU2 59 aa2.89□□□□□ -1.95
PTPRM-208ENST00000578600 A6NED7 52 aa2.89□□□□□ -1.95
PTPRM-208ENST00000578600 H3BQ85 93 aa2.89□□□□□ -1.95
PTPRM-208ENST00000578600 I3L3M4 83 aa2.89□□□□□ -1.95
PTPRM-208ENST00000578600 PFDN1O60925 122 aa2.89□□□□□ -1.95
PTPRM-208ENST00000578600 MPC2O95563 127 aa2.89□□□□□ -1.95
PTPRM-208ENST00000578600 PPP1R17O96001 155 aa2.89□□□□□ -1.95
PTPRM-208ENST00000578600 ATP6V0CP27449 155 aa2.89□□□□□ -1.95
PTPRM-208ENST00000578600 MEF2BQ02080 365 aaPredicted RBP2.89□□□□□ -1.95
PTPRM-208ENST00000578600 BAGE2Q86Y30 109 aa2.89□□□□□ -1.95
PTPRM-208ENST00000578600 C3orf22Q8N5N4 141 aa2.89□□□□□ -1.95
PTPRM-208ENST00000578600 A0A0B4J2C4 111 aa2.88□□□□□ -1.95
PTPRM-208ENST00000578600 A8MWP4 228 aa2.88□□□□□ -1.95
PTPRM-208ENST00000578600 BCL2P10415 239 aa2.88□□□□□ -1.95
PTPRM-208ENST00000578600 IL7P13232 177 aa2.88□□□□□ -1.95
PTPRM-208ENST00000578600 AKR1C8PQ5T2L2 129 aa2.88□□□□□ -1.95
PTPRM-208ENST00000578600 ALG5Q9Y673 324 aa2.88□□□□□ -1.95
PTPRM-208ENST00000578600 TRBV30A0A0K0K1B3 111 aa2.87□□□□□ -1.95
PTPRM-208ENST00000578600 IFNA1P01562 189 aa2.87□□□□□ -1.95
PTPRM-208ENST00000578600 KRTAP13-3Q3SY46 172 aa2.87□□□□□ -1.95
PTPRM-208ENST00000578600 PDZD11Q5EBL8 140 aa2.87□□□□□ -1.95
PTPRM-208ENST00000578600 FAM19A2Q8N3H0 131 aa2.87□□□□□ -1.95
PTPRM-208ENST00000578600 C9orf62Q8N4C0 152 aa2.87□□□□□ -1.95
PTPRM-208ENST00000578600 PACRGQ96M98 296 aaPredicted RBP2.87□□□□□ -1.95
PTPRM-208ENST00000578600 SMIM3Q9BZL3 60 aa2.87□□□□□ -1.95
PTPRM-208ENST00000578600 CDC42SE2Q9NRR3 84 aa2.87□□□□□ -1.95
PTPRM-208ENST00000578600 TP73-AS1Q9UF72 201 aa2.87□□□□□ -1.95
PTPRM-208ENST00000578600 C7orf77A4D0Y5 90 aa2.86□□□□□ -1.95
PTPRM-208ENST00000578600 SSNA1O43805 119 aa2.86□□□□□ -1.95
PTPRM-208ENST00000578600 BCE1O60756 84 aa2.86□□□□□ -1.95
PTPRM-208ENST00000578600 SPAG11BQ08648 103 aa2.86□□□□□ -1.95
PTPRM-208ENST00000578600 C4orf26Q17RF5 130 aa2.86□□□□□ -1.95
PTPRM-208ENST00000578600 SCGB1D4Q6XE38 83 aa2.86□□□□□ -1.95
PTPRM-208ENST00000578600 FAM19A5Q7Z5A7 132 aaPredicted RBP2.86□□□□□ -1.95
PTPRM-208ENST00000578600 SMDT1Q9H4I9 107 aa2.86□□□□□ -1.95
PTPRM-208ENST00000578600 TRBV6-5A0A0K0K1A5 114 aa2.85□□□□□ -1.95
PTPRM-208ENST00000578600 SDHAF1A6NFY7 115 aa2.85□□□□□ -1.95
PTPRM-208ENST00000578600 IGLC6P0CF74 106 aa2.85□□□□□ -1.95
PTPRM-208ENST00000578600 LINC00299Q6ZSB3 139 aa2.85□□□□□ -1.95
PTPRM-208ENST00000578600 DAND5Q8N907 189 aa2.85□□□□□ -1.95
PTPRM-208ENST00000578600 BORCS7Q96B45 105 aa2.85□□□□□ -1.95
PTPRM-208ENST00000578600 GNB1LQ9BYB4 327 aa2.85□□□□□ -1.95
PTPRM-208ENST00000578600 ST20Q9HBF5 79 aa2.85□□□□□ -1.95
PTPRM-208ENST00000578600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.84□□□□□ -1.95
PTPRM-208ENST00000578600 TGIF2-C20orf24A0A0A6YYL0 155 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 TINCRA0A1B0GVN0 87 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 IGKV2-29A2NJV5 120 aaPredicted RBP2.84□□□□□ -1.95
PTPRM-208ENST00000578600 MAP1LC3B2A6NCE7 125 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 UMAD1C9J7I0 102 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 PLA2G10O15496 165 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 LINC00614P0C842 121 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 FCER1GP30273 86 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 TIMM21Q9BVV7 248 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 CNFNQ9BYD5 112 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 MAP1LC3BQ9GZQ8 125 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 UBE2D4Q9Y2X8 147 aa2.84□□□□□ -1.95
PTPRM-208ENST00000578600 TRBV24-1A0A075B6N3 115 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 TRAV13-1A0A0B4J241 112 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 TRBV27A0A0K0K1C4 114 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 MUC21A0A140T8X8 626 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 SIX6O95475 246 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 SPINK1P00995 79 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 H2BFSP57053 126 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 LYZL1Q6UWQ5 148 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 ADM2Q7Z4H4 148 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 S100ZQ8WXG8 99 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 LINC00846Q9NV44 126 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 R4GN34 69 aa2.83□□□□□ -1.96
PTPRM-208ENST00000578600 ZNF727A8MUV8 499 aa2.82□□□□□ -1.96
PTPRM-208ENST00000578600 INMT-MINDY4F8WBC2 141 aa2.82□□□□□ -1.96
PTPRM-208ENST00000578600 M0R2T5 61 aa2.82□□□□□ -1.96
PTPRM-208ENST00000578600 GNG4P50150 75 aa2.82□□□□□ -1.96
PTPRM-208ENST00000578600 DEFA1P59665 94 aa2.82□□□□□ -1.96
PTPRM-208ENST00000578600 DEFA3P59666 94 aa2.82□□□□□ -1.96
PTPRM-208ENST00000578600 CKS1BP61024 79 aa2.82□□□□□ -1.96
PTPRM-208ENST00000578600 RPS29P62273 56 aaKnown RBP2.82□□□□□ -1.96
PTPRM-208ENST00000578600 C5orf38Q86SI9 138 aa2.82□□□□□ -1.96
PTPRM-208ENST00000578600 RETNLBQ9BQ08 111 aa2.82□□□□□ -1.96
PTPRM-208ENST00000578600 EIF5A2Q9GZV4 153 aaKnown RBP2.82□□□□□ -1.96
PTPRM-208ENST00000578600 PDE6DO43924 150 aa2.81□□□□□ -1.96
PTPRM-208ENST00000578600 RPL35P42766 123 aaKnown RBP2.81□□□□□ -1.96
PTPRM-208ENST00000578600 HBBP68871 147 aa2.81□□□□□ -1.96
PTPRM-208ENST00000578600 C10orf91Q5T1B1 145 aa2.81□□□□□ -1.96
PTPRM-208ENST00000578600 MANBALQ9NQG1 85 aa2.81□□□□□ -1.96
PTPRM-208ENST00000578600 SPANXA1Q9NS26 97 aa2.81□□□□□ -1.96
PTPRM-208ENST00000578600 C22orf24Q9Y442 160 aa2.81□□□□□ -1.96
PTPRM-208ENST00000578600 SLC25A20O43772 301 aa2.8□□□□□ -1.96
PTPRM-208ENST00000578600 SEC11AP67812 179 aa2.8□□□□□ -1.96
PTPRM-208ENST00000578600 CCL20P78556 96 aa2.8□□□□□ -1.96
PTPRM-208ENST00000578600 MRPS36P82909 103 aaKnown RBP2.8□□□□□ -1.96
PTPRM-208ENST00000578600 KCNRGQ8N5I3 272 aa2.8□□□□□ -1.96
PTPRM-208ENST00000578600 SFT2D1Q8WV19 159 aa2.8□□□□□ -1.96
PTPRM-208ENST00000578600 C6orf48Q9UBA6 75 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms