RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 SCGB1C2P0DMR2 95 aa11.22□□□□□ -0.61
SREBF1-218ENST00000578469 C9orf116Q5BN46 136 aaPredicted RBP11.21□□□□□ -0.61
SREBF1-218ENST00000578469 TTC32Q5I0X7 151 aa11.21□□□□□ -0.61
SREBF1-218ENST00000578469 C6orf48Q9UBA6 75 aa11.21□□□□□ -0.61
SREBF1-218ENST00000578469 COX6CP09669 75 aa11.19□□□□□ -0.62
SREBF1-218ENST00000578469 TRBV20-1A0A075B6N2 111 aa11.18□□□□□ -0.62
SREBF1-218ENST00000578469 SYCNQ0VAF6 134 aa11.18□□□□□ -0.62
SREBF1-218ENST00000578469 Q6ZRU5 148 aa11.18□□□□□ -0.62
SREBF1-218ENST00000578469 USP17L23D6RBM5 183 aa11.17□□□□□ -0.62
SREBF1-218ENST00000578469 NDUFC2O95298 119 aa11.17□□□□□ -0.62
SREBF1-218ENST00000578469 RYR1P21817 5038 aa11.16□□□□□ -0.62
SREBF1-218ENST00000578469 KIAA1109Q2LD37 5005 aa11.15□□□□□ -0.62
SREBF1-218ENST00000578469 IGKV2-28A0A075B6P5 120 aa11.15□□□□□ -0.62
SREBF1-218ENST00000578469 PSCAO43653 123 aa11.15□□□□□ -0.62
SREBF1-218ENST00000578469 IGKV2D-28P01615 120 aa11.15□□□□□ -0.62
SREBF1-218ENST00000578469 NBDYA0A0U1RRE5 68 aa11.14□□□□□ -0.63
SREBF1-218ENST00000578469 TRIAP1O43715 76 aa11.14□□□□□ -0.63
SREBF1-218ENST00000578469 RNF151Q2KHN1 245 aa11.14□□□□□ -0.63
SREBF1-218ENST00000578469 KRTAP1-5Q9BYS1 174 aa11.14□□□□□ -0.63
SREBF1-218ENST00000578469 DNAH6Q9C0G6 4158 aa11.13□□□□□ -0.63
SREBF1-218ENST00000578469 LINC00337Q8N6G1 96 aa11.13□□□□□ -0.63
SREBF1-218ENST00000578469 OR13C6PQ8NH95 151 aa11.13□□□□□ -0.63
SREBF1-218ENST00000578469 CARD19Q96LW7 228 aa11.13□□□□□ -0.63
SREBF1-218ENST00000578469 NDUFC2-KCTD14E9PQ53 114 aa11.12□□□□□ -0.63
SREBF1-218ENST00000578469 H3BMG7 143 aa11.12□□□□□ -0.63
SREBF1-218ENST00000578469 VPS13DQ5THJ4 4388 aa11.12□□□□□ -0.63
SREBF1-218ENST00000578469 TCL1BO95988 128 aa11.11□□□□□ -0.63
SREBF1-218ENST00000578469 ATXN8Q156A1 80 aa11.11□□□□□ -0.63
SREBF1-218ENST00000578469 C14orf177Q52M58 125 aa11.1□□□□□ -0.63
SREBF1-218ENST00000578469 RPL28P46779 137 aaKnown RBP11.09□□□□□ -0.63
SREBF1-218ENST00000578469 LINC00336Q6ZUF6 198 aa11.09□□□□□ -0.63
SREBF1-218ENST00000578469 F8W1H4 67 aa11.08□□□□□ -0.64
SREBF1-218ENST00000578469 LECT2O14960 151 aa11.08□□□□□ -0.64
SREBF1-218ENST00000578469 TMEM126AQ9H061 195 aa11.08□□□□□ -0.64
SREBF1-218ENST00000578469 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
SREBF1-218ENST00000578469 TLX1NBP0CAT3 122 aa11.07□□□□□ -0.64
SREBF1-218ENST00000578469 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
SREBF1-218ENST00000578469 NCR3O14931 201 aa11.06□□□□□ -0.64
SREBF1-218ENST00000578469 GAGE2EQ4V326 116 aa11.06□□□□□ -0.64
SREBF1-218ENST00000578469 S100A7L2Q5SY68 101 aa11.06□□□□□ -0.64
SREBF1-218ENST00000578469 SMIM11BQ8TCY0 68 aa11.06□□□□□ -0.64
SREBF1-218ENST00000578469 GAGE2DQ9UEU5 116 aa11.06□□□□□ -0.64
SREBF1-218ENST00000578469 PRR3P79522 188 aaKnown RBP11.05□□□□□ -0.64
SREBF1-218ENST00000578469 SLPIP03973 132 aa11.04□□□□□ -0.64
SREBF1-218ENST00000578469 Q6ZRP5 223 aa11.04□□□□□ -0.64
SREBF1-218ENST00000578469 PKHD1P08F94 4074 aa11.04□□□□□ -0.64
SREBF1-218ENST00000578469 H0YGX0 51 aa11.03□□□□□ -0.64
SREBF1-218ENST00000578469 RPL18AQ02543 176 aaKnown RBP11.03□□□□□ -0.64
SREBF1-218ENST00000578469 LOC107984640A0A0U1RRK4 108 aa11.02□□□□□ -0.65
SREBF1-218ENST00000578469 LST1O00453 97 aa11.02□□□□□ -0.65
SREBF1-218ENST00000578469 LINC01620Q4KN68 170 aa11.02□□□□□ -0.65
SREBF1-218ENST00000578469 Q8NDZ9 215 aa11.02□□□□□ -0.65
SREBF1-218ENST00000578469 CLEC2BQ92478 149 aa11.02□□□□□ -0.65
SREBF1-218ENST00000578469 M0R2N4 97 aa11.01□□□□□ -0.65
SREBF1-218ENST00000578469 WFDC2Q14508 124 aa11.01□□□□□ -0.65
SREBF1-218ENST00000578469 PRO0461Q9UI25 63 aa11.01□□□□□ -0.65
SREBF1-218ENST00000578469 C9JAW5 83 aa11□□□□□ -0.65
SREBF1-218ENST00000578469 VPREB1P12018 145 aa11□□□□□ -0.65
SREBF1-218ENST00000578469 CNBPP62633 177 aaKnown RBP11□□□□□ -0.65
SREBF1-218ENST00000578469 FAT2Q9NYQ8 4349 aa11□□□□□ -0.65
SREBF1-218ENST00000578469 M0R378 163 aa10.99□□□□□ -0.65
SREBF1-218ENST00000578469 CBY1Q9Y3M2 126 aa10.99□□□□□ -0.65
SREBF1-218ENST00000578469 Q6ZRN7 208 aaPredicted RBP10.98□□□□□ -0.65
SREBF1-218ENST00000578469 MTURNQ8N3F0 131 aa10.98□□□□□ -0.65
SREBF1-218ENST00000578469 DNAH2Q9P225 4427 aa10.98□□□□□ -0.65
SREBF1-218ENST00000578469 SLC25A20O43772 301 aa10.97□□□□□ -0.65
SREBF1-218ENST00000578469 IGLV6-57P01721 117 aa10.97□□□□□ -0.65
SREBF1-218ENST00000578469 TRACP01848 142 aa10.97□□□□□ -0.65
SREBF1-218ENST00000578469 GAGE2BQ13066 116 aa10.97□□□□□ -0.65
SREBF1-218ENST00000578469 C9orf129Q5T035 196 aaKnown RBP10.97□□□□□ -0.65
SREBF1-218ENST00000578469 PLA2G2DQ9UNK4 145 aa10.97□□□□□ -0.65
SREBF1-218ENST00000578469 PKIGQ9Y2B9 76 aa10.97□□□□□ -0.65
SREBF1-218ENST00000578469 A0A1B0GVY2 172 aa10.96□□□□□ -0.65
SREBF1-218ENST00000578469 Q6ZR54 194 aa10.96□□□□□ -0.65
SREBF1-218ENST00000578469 NKAPP1Q8N9T2 125 aa10.96□□□□□ -0.65
SREBF1-218ENST00000578469 DNAH11Q96DT5 4516 aa10.96□□□□□ -0.66
SREBF1-218ENST00000578469 DNAH17Q9UFH2 4485 aa10.95□□□□□ -0.66
SREBF1-218ENST00000578469 LRCOL1A6NCL2 159 aa10.95□□□□□ -0.66
SREBF1-218ENST00000578469 M0QXV9 152 aa10.95□□□□□ -0.66
SREBF1-218ENST00000578469 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.94□□□□□ -0.66
SREBF1-218ENST00000578469 TRBV10-3A0A0K0K1G6 114 aa10.94□□□□□ -0.66
SREBF1-218ENST00000578469 SMCPP49901 116 aaPredicted RBP10.94□□□□□ -0.66
SREBF1-218ENST00000578469 DYNC1H1Q14204 4646 aaKnown RBP10.94□□□□□ -0.66
SREBF1-218ENST00000578469 TRAV23DV6A0A075B6W5 121 aa10.93□□□□□ -0.66
SREBF1-218ENST00000578469 H3BT86 120 aa10.93□□□□□ -0.66
SREBF1-218ENST00000578469 SNCGO76070 127 aa10.93□□□□□ -0.66
SREBF1-218ENST00000578469 ANKRD29Q8N6D5 301 aa10.93□□□□□ -0.66
SREBF1-218ENST00000578469 ABCA13Q86UQ4 5058 aa10.93□□□□□ -0.66
SREBF1-218ENST00000578469 DNAL4O96015 105 aa10.92□□□□□ -0.66
SREBF1-218ENST00000578469 C6orf99Q4VX62 202 aa10.92□□□□□ -0.66
SREBF1-218ENST00000578469 IGLV5-37A0A075B6J1 123 aa10.91□□□□□ -0.66
SREBF1-218ENST00000578469 A0A1B0GX51 115 aa10.91□□□□□ -0.66
SREBF1-218ENST00000578469 ETDBQ3ZM63 59 aa10.91□□□□□ -0.66
SREBF1-218ENST00000578469 C1orf134Q5TEV5 83 aa10.91□□□□□ -0.66
SREBF1-218ENST00000578469 LINC01600Q96MT4 127 aa10.91□□□□□ -0.66
SREBF1-218ENST00000578469 FAM218AQ96MZ4 157 aa10.91□□□□□ -0.66
SREBF1-218ENST00000578469 C16orf90A8MZG2 172 aa10.9□□□□□ -0.66
SREBF1-218ENST00000578469 SERTAD4-AS1Q5TG53 156 aa10.9□□□□□ -0.66
SREBF1-218ENST00000578469 DIRC1Q969H9 104 aa10.9□□□□□ -0.66
SREBF1-218ENST00000578469 K7ERU9 68 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms