RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 Q6ZRU5 148 aa5.07□□□□□ -1.6
CCDC40-215ENST00000576033 Q6ZSA8 131 aa5.07□□□□□ -1.6
CCDC40-215ENST00000576033 SCXQ7RTU7 201 aa5.07□□□□□ -1.6
CCDC40-215ENST00000576033 Q8IZM0 81 aa5.07□□□□□ -1.6
CCDC40-215ENST00000576033 A0A0B4J2C4 111 aa5.06□□□□□ -1.6
CCDC40-215ENST00000576033 A4D1N5 150 aa5.06□□□□□ -1.6
CCDC40-215ENST00000576033 CDK2AP2O75956 126 aa5.06□□□□□ -1.6
CCDC40-215ENST00000576033 MALP21145 153 aa5.06□□□□□ -1.6
CCDC40-215ENST00000576033 CNBPP62633 177 aaKnown RBP5.06□□□□□ -1.6
CCDC40-215ENST00000576033 RPL24P83731 157 aaKnown RBP5.06□□□□□ -1.6
CCDC40-215ENST00000576033 C14orf177Q52M58 125 aa5.06□□□□□ -1.6
CCDC40-215ENST00000576033 C10orf25Q5T742 122 aa5.06□□□□□ -1.6
CCDC40-215ENST00000576033 MUSTN1Q8IVN3 82 aa5.06□□□□□ -1.6
CCDC40-215ENST00000576033 C9orf163Q8N9P6 203 aa5.06□□□□□ -1.6
CCDC40-215ENST00000576033 A0A096LNI7 61 aa5.05□□□□□ -1.6
CCDC40-215ENST00000576033 CFC1BP0CG36 223 aa5.05□□□□□ -1.6
CCDC40-215ENST00000576033 CFC1P0CG37 223 aa5.05□□□□□ -1.6
CCDC40-215ENST00000576033 C2orf82Q6UX34 121 aa5.05□□□□□ -1.6
CCDC40-215ENST00000576033 SDIM1Q6ZPB5 146 aa5.05□□□□□ -1.6
CCDC40-215ENST00000576033 CARD19Q96LW7 228 aa5.05□□□□□ -1.6
CCDC40-215ENST00000576033 SRRM2Q9UQ35 2752 aaKnown RBP5.05□□□□□ -1.6
CCDC40-215ENST00000576033 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.04□□□□□ -1.6
CCDC40-215ENST00000576033 IGKV2-24A0A0C4DH68 120 aa5.04□□□□□ -1.6
CCDC40-215ENST00000576033 A0A1W2PPM0 123 aa5.04□□□□□ -1.6
CCDC40-215ENST00000576033 H3BUT2 72 aa5.04□□□□□ -1.6
CCDC40-215ENST00000576033 CXCL5P42830 114 aa5.04□□□□□ -1.6
CCDC40-215ENST00000576033 UBE2V1Q13404 147 aa5.04□□□□□ -1.6
CCDC40-215ENST00000576033 CIRBPQ14011 172 aaKnown RBP5.04□□□□□ -1.6
CCDC40-215ENST00000576033 SOSTDC1Q6X4U4 206 aa5.04□□□□□ -1.6
CCDC40-215ENST00000576033 CIRBP-AS1Q8TBR5 109 aa5.04□□□□□ -1.6
CCDC40-215ENST00000576033 LINC00308Q8TCZ7 52 aa5.04□□□□□ -1.6
CCDC40-215ENST00000576033 RAB37Q96AX2 223 aa5.04□□□□□ -1.6
CCDC40-215ENST00000576033 MYCBP2O75592 4640 aa5.04□□□□□ -1.6
CCDC40-215ENST00000576033 LOC107984156A0A0G2JMH3 177 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 ZNF561-AS1K7EIQ3 104 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 K7EP34 96 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 TSPAN13O95857 204 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 SYCNQ0VAF6 134 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 C9orf116Q5BN46 136 aaPredicted RBP5.03□□□□□ -1.6
CCDC40-215ENST00000576033 CFAP161Q6P656 301 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 UNQ6190/PRO20217Q6UXQ8 127 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 ARL17AQ8IVW1 177 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 CAMK2N2Q96S95 79 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 TOMM7Q9P0U1 55 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 C6orf48Q9UBA6 75 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 PCLOQ9Y6V0 5065 aa5.03□□□□□ -1.6
CCDC40-215ENST00000576033 VAMP3Q15836 100 aa5.02□□□□□ -1.61
CCDC40-215ENST00000576033 DAND5Q8N907 189 aa5.02□□□□□ -1.61
CCDC40-215ENST00000576033 SPACA4Q8TDM5 124 aa5.02□□□□□ -1.61
CCDC40-215ENST00000576033 COPS9Q8WXC6 57 aa5.02□□□□□ -1.61
CCDC40-215ENST00000576033 NAA38Q9BRA0 125 aaKnown RBP5.02□□□□□ -1.61
CCDC40-215ENST00000576033 PRO1854Q9UHT4 67 aa5.02□□□□□ -1.61
CCDC40-215ENST00000576033 ERG28Q9UKR5 140 aa5.02□□□□□ -1.61
CCDC40-215ENST00000576033 APOMO95445 188 aa5.01□□□□□ -1.61
CCDC40-215ENST00000576033 PRSS2P07478 247 aa5.01□□□□□ -1.61
CCDC40-215ENST00000576033 FABP2P12104 132 aa5.01□□□□□ -1.61
CCDC40-215ENST00000576033 MEIG1Q5JSS6 88 aa5.01□□□□□ -1.61
CCDC40-215ENST00000576033 Q5VSD8 79 aa5.01□□□□□ -1.61
CCDC40-215ENST00000576033 LINC00528Q8N1L1 170 aa5.01□□□□□ -1.61
CCDC40-215ENST00000576033 Q8N1X5 172 aa5.01□□□□□ -1.61
CCDC40-215ENST00000576033 LRP1Q07954 4544 aaKnown RBP5□□□□□ -1.61
CCDC40-215ENST00000576033 A0A087WYN8 130 aa5□□□□□ -1.61
CCDC40-215ENST00000576033 FAM168BA1KXE4 195 aa5□□□□□ -1.61
CCDC40-215ENST00000576033 RPL18AQ02543 176 aaKnown RBP5□□□□□ -1.61
CCDC40-215ENST00000576033 GAGE2BQ13066 116 aa5□□□□□ -1.61
CCDC40-215ENST00000576033 COX17Q14061 63 aa5□□□□□ -1.61
CCDC40-215ENST00000576033 C6orf226Q5I0X4 101 aa5□□□□□ -1.61
CCDC40-215ENST00000576033 MIR7-3HGQ8N6C7 128 aa5□□□□□ -1.61
CCDC40-215ENST00000576033 SPCS1Q9Y6A9 102 aa5□□□□□ -1.61
CCDC40-215ENST00000576033 F8WDY8 70 aa4.99□□□□□ -1.61
CCDC40-215ENST00000576033 KRTAP10-4P60372 401 aaPredicted RBP4.99□□□□□ -1.61
CCDC40-215ENST00000576033 Q6ZRP5 223 aa4.99□□□□□ -1.61
CCDC40-215ENST00000576033 GTF2H5Q6ZYL4 71 aa4.99□□□□□ -1.61
CCDC40-215ENST00000576033 C2orf48Q96LS8 159 aa4.99□□□□□ -1.61
CCDC40-215ENST00000576033 FAT3Q8TDW7 4589 aa4.99□□□□□ -1.61
CCDC40-215ENST00000576033 IGKV2-28A0A075B6P5 120 aa4.98□□□□□ -1.61
CCDC40-215ENST00000576033 TRBV30A0A0K0K1B3 111 aa4.98□□□□□ -1.61
CCDC40-215ENST00000576033 A0A0U1RRA0 63 aa4.98□□□□□ -1.61
CCDC40-215ENST00000576033 A0A1W2PNN7 141 aa4.98□□□□□ -1.61
CCDC40-215ENST00000576033 GAGE10A6NGK3 116 aa4.98□□□□□ -1.61
CCDC40-215ENST00000576033 IGKV2D-28P01615 120 aa4.98□□□□□ -1.61
CCDC40-215ENST00000576033 CKS1BP61024 79 aa4.98□□□□□ -1.61
CCDC40-215ENST00000576033 NPC2P61916 151 aa4.98□□□□□ -1.61
CCDC40-215ENST00000576033 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
CCDC40-215ENST00000576033 KRTAP7-1Q8IUC3 87 aa4.98□□□□□ -1.61
CCDC40-215ENST00000576033 LOC107984640A0A0U1RRK4 108 aa4.97□□□□□ -1.61
CCDC40-215ENST00000576033 EPM2AB3EWF7 344 aa4.97□□□□□ -1.61
CCDC40-215ENST00000576033 LINC00158P58513 81 aa4.97□□□□□ -1.61
CCDC40-215ENST00000576033 GAGE2EQ4V326 116 aa4.97□□□□□ -1.61
CCDC40-215ENST00000576033 LYRM7Q5U5X0 104 aa4.97□□□□□ -1.61
CCDC40-215ENST00000576033 GAGE2DQ9UEU5 116 aa4.97□□□□□ -1.61
CCDC40-215ENST00000576033 PRO0461Q9UI25 63 aa4.97□□□□□ -1.61
CCDC40-215ENST00000576033 FLG2Q5D862 2391 aaPredicted RBP4.96□□□□□ -1.62
CCDC40-215ENST00000576033 TRBV20-1A0A075B6N2 111 aa4.96□□□□□ -1.62
CCDC40-215ENST00000576033 NDUFC2O95298 119 aa4.96□□□□□ -1.62
CCDC40-215ENST00000576033 RPL13AP40429 203 aaKnown RBP4.96□□□□□ -1.62
CCDC40-215ENST00000576033 C9orf129Q5T035 196 aaKnown RBP4.96□□□□□ -1.62
CCDC40-215ENST00000576033 KRTAP11-1Q8IUC1 163 aa4.96□□□□□ -1.62
CCDC40-215ENST00000576033 SND1-IT1Q9HBX3 110 aa4.96□□□□□ -1.62
CCDC40-215ENST00000576033 TRIAP1O43715 76 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms