RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 PATE1Q8WXA2 126 aa3.14□□□□□ -1.91
TOM1L1-222ENST00000575909 MRPL33O75394 65 aaKnown RBP3.13□□□□□ -1.91
TOM1L1-222ENST00000575909 DEFB132Q7Z7B7 95 aa3.13□□□□□ -1.91
TOM1L1-222ENST00000575909 GOLGA4Q13439 2230 aaKnown RBP3.13□□□□□ -1.91
TOM1L1-222ENST00000575909 SPAG17Q6Q759 2223 aa3.13□□□□□ -1.91
TOM1L1-222ENST00000575909 TRGV2A0A075B6R0 118 aa3.12□□□□□ -1.91
TOM1L1-222ENST00000575909 IGKV3OR2-268A0A0C4DH90 116 aa3.12□□□□□ -1.91
TOM1L1-222ENST00000575909 IGKV4-1P06312 121 aa3.12□□□□□ -1.91
TOM1L1-222ENST00000575909 Q6ZTI0 123 aa3.12□□□□□ -1.91
TOM1L1-222ENST00000575909 COA5Q86WW8 74 aa3.12□□□□□ -1.91
TOM1L1-222ENST00000575909 CEP192Q8TEP8 1941 aa3.11□□□□□ -1.91
TOM1L1-222ENST00000575909 SEC16AO15027 2179 aa3.11□□□□□ -1.91
TOM1L1-222ENST00000575909 DOCK10Q96BY6 2186 aa3.1□□□□□ -1.91
TOM1L1-222ENST00000575909 IGKV2-40A0A087WW87 121 aaPredicted RBP3.1□□□□□ -1.91
TOM1L1-222ENST00000575909 NCR3O14931 201 aa3.1□□□□□ -1.91
TOM1L1-222ENST00000575909 IGKV2D-40P01614 121 aaPredicted RBP3.1□□□□□ -1.91
TOM1L1-222ENST00000575909 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
TOM1L1-222ENST00000575909 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
TOM1L1-222ENST00000575909 FREM1Q5H8C1 2179 aa3.1□□□□□ -1.91
TOM1L1-222ENST00000575909 TRBV6-4A0A1B0GX49 114 aa3.09□□□□□ -1.91
TOM1L1-222ENST00000575909 CACNA1DQ01668 2161 aa3.09□□□□□ -1.91
TOM1L1-222ENST00000575909 NDUFA1O15239 70 aa3.08□□□□□ -1.92
TOM1L1-222ENST00000575909 IGLV3-1P01715 115 aa3.08□□□□□ -1.92
TOM1L1-222ENST00000575909 COX7BP24311 80 aa3.08□□□□□ -1.92
TOM1L1-222ENST00000575909 LINC00308Q8TCZ7 52 aa3.08□□□□□ -1.92
TOM1L1-222ENST00000575909 TNCP24821 2201 aa3.08□□□□□ -1.92
TOM1L1-222ENST00000575909 TRGV1A0A0A0MS02 117 aa3.07□□□□□ -1.92
TOM1L1-222ENST00000575909 LINC00959A0A1B0GUT2 108 aa3.07□□□□□ -1.92
TOM1L1-222ENST00000575909 BRD3OSQ6XYD6 125 aa3.07□□□□□ -1.92
TOM1L1-222ENST00000575909 TTTY10Q9BZA0 68 aa3.07□□□□□ -1.92
TOM1L1-222ENST00000575909 SSC5DA1L4H1 1573 aa3.06□□□□□ -1.92
TOM1L1-222ENST00000575909 DEFB131BA0A096LNP1 70 aa3.05□□□□□ -1.92
TOM1L1-222ENST00000575909 A0A1B0GU69 56 aa3.05□□□□□ -1.92
TOM1L1-222ENST00000575909 ZFHX3Q15911 3703 aa3.04□□□□□ -1.92
TOM1L1-222ENST00000575909 SHANK1Q9Y566 2161 aa3.03□□□□□ -1.92
TOM1L1-222ENST00000575909 A0A087WTM6 91 aa3.03□□□□□ -1.92
TOM1L1-222ENST00000575909 IGKV2-29A2NJV5 120 aaPredicted RBP3.03□□□□□ -1.92
TOM1L1-222ENST00000575909 LINC00472Q9H8W2 130 aa3.03□□□□□ -1.92
TOM1L1-222ENST00000575909 TNRC6CQ9HCJ0 1690 aaKnown RBP3.03□□□□□ -1.92
TOM1L1-222ENST00000575909 NBDYA0A0U1RRE5 68 aa3.01□□□□□ -1.93
TOM1L1-222ENST00000575909 LINC00158P58513 81 aa3.01□□□□□ -1.93
TOM1L1-222ENST00000575909 RPL37AP61513 92 aaKnown RBP3.01□□□□□ -1.93
TOM1L1-222ENST00000575909 PRR14LQ5THK1 2151 aa3.01□□□□□ -1.93
TOM1L1-222ENST00000575909 ALPK2Q86TB3 2170 aa3.01□□□□□ -1.93
TOM1L1-222ENST00000575909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3□□□□□ -1.93
TOM1L1-222ENST00000575909 A0A0G2JQZ4 141 aa3□□□□□ -1.93
TOM1L1-222ENST00000575909 C5orf56Q8N8D9 126 aa3□□□□□ -1.93
TOM1L1-222ENST00000575909 SMIM11BQ8TCY0 68 aa3□□□□□ -1.93
TOM1L1-222ENST00000575909 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
TOM1L1-222ENST00000575909 CUL9Q8IWT3 2517 aa2.99□□□□□ -1.93
TOM1L1-222ENST00000575909 KMT2BQ9UMN6 2715 aaPredicted RBP2.99□□□□□ -1.93
TOM1L1-222ENST00000575909 ACYP2P14621 99 aa2.98□□□□□ -1.93
TOM1L1-222ENST00000575909 CRIP1P50238 77 aa2.98□□□□□ -1.93
TOM1L1-222ENST00000575909 Q6ZQY7 126 aa2.98□□□□□ -1.93
TOM1L1-222ENST00000575909 Q96NJ1 140 aa2.98□□□□□ -1.93
TOM1L1-222ENST00000575909 CCL26Q9Y258 94 aa2.98□□□□□ -1.93
TOM1L1-222ENST00000575909 RP1P56715 2156 aa2.98□□□□□ -1.93
TOM1L1-222ENST00000575909 ABCA4P78363 2273 aa2.98□□□□□ -1.93
TOM1L1-222ENST00000575909 POLR2KP53803 58 aaKnown RBP2.97□□□□□ -1.93
TOM1L1-222ENST00000575909 COL4A5P29400 1685 aa2.96□□□□□ -1.94
TOM1L1-222ENST00000575909 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
TOM1L1-222ENST00000575909 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
TOM1L1-222ENST00000575909 Q8IZM0 81 aa2.96□□□□□ -1.94
TOM1L1-222ENST00000575909 SDK1Q7Z5N4 2213 aa2.96□□□□□ -1.94
TOM1L1-222ENST00000575909 C10orf55Q5SWW7 151 aa2.95□□□□□ -1.94
TOM1L1-222ENST00000575909 H3BSH0 61 aa2.94□□□□□ -1.94
TOM1L1-222ENST00000575909 INE1O15225 51 aa2.94□□□□□ -1.94
TOM1L1-222ENST00000575909 PRCDQ00LT1 54 aa2.93□□□□□ -1.94
TOM1L1-222ENST00000575909 CCL19Q99731 98 aa2.93□□□□□ -1.94
TOM1L1-222ENST00000575909 TP53AIP1Q9HCN2 124 aa2.93□□□□□ -1.94
TOM1L1-222ENST00000575909 UNC13CQ8NB66 2214 aa2.93□□□□□ -1.94
TOM1L1-222ENST00000575909 M0R2N4 97 aa2.92□□□□□ -1.94
TOM1L1-222ENST00000575909 LY6G6CO95867 125 aa2.92□□□□□ -1.94
TOM1L1-222ENST00000575909 ANGP03950 147 aaKnown RBP2.92□□□□□ -1.94
TOM1L1-222ENST00000575909 LINC00575Q6W349 94 aa2.92□□□□□ -1.94
TOM1L1-222ENST00000575909 SPTY2D1-AS1A0A0U1RR47 76 aa2.91□□□□□ -1.94
TOM1L1-222ENST00000575909 CDKN2A-AS1Q9UH64 79 aa2.91□□□□□ -1.94
TOM1L1-222ENST00000575909 DEFB106AQ8N104 65 aa2.9□□□□□ -1.95
TOM1L1-222ENST00000575909 H3BRN7 92 aa2.88□□□□□ -1.95
TOM1L1-222ENST00000575909 PIGYQ3MUY2 71 aa2.88□□□□□ -1.95
TOM1L1-222ENST00000575909 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.88□□□□□ -1.95
TOM1L1-222ENST00000575909 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
TOM1L1-222ENST00000575909 SSBP3-AS1Q7Z2R9 100 aa2.88□□□□□ -1.95
TOM1L1-222ENST00000575909 MED13LQ71F56 2210 aa2.88□□□□□ -1.95
TOM1L1-222ENST00000575909 LYNX1G3V0Z9 82 aa2.87□□□□□ -1.95
TOM1L1-222ENST00000575909 RPS27P42677 84 aaKnown RBP2.87□□□□□ -1.95
TOM1L1-222ENST00000575909 TPRXLQ17RH7 258 aa2.86□□□□□ -1.95
TOM1L1-222ENST00000575909 PLAC4Q8WY50 150 aa2.86□□□□□ -1.95
TOM1L1-222ENST00000575909 CCL22O00626 93 aa2.85□□□□□ -1.95
TOM1L1-222ENST00000575909 C10orf99Q6UWK7 81 aa2.85□□□□□ -1.95
TOM1L1-222ENST00000575909 Q6ZRX8 168 aa2.85□□□□□ -1.95
TOM1L1-222ENST00000575909 BPTFQ12830 3046 aa2.84□□□□□ -1.95
TOM1L1-222ENST00000575909 RPL39P62891 51 aaKnown RBP2.84□□□□□ -1.95
TOM1L1-222ENST00000575909 COX6B2Q6YFQ2 88 aa2.84□□□□□ -1.95
TOM1L1-222ENST00000575909 SPACA4Q8TDM5 124 aa2.84□□□□□ -1.95
TOM1L1-222ENST00000575909 COL4A2P08572 1712 aa2.83□□□□□ -1.96
TOM1L1-222ENST00000575909 SPINK9Q5DT21 86 aa2.83□□□□□ -1.96
TOM1L1-222ENST00000575909 RPL39LQ96EH5 51 aaKnown RBP2.83□□□□□ -1.96
TOM1L1-222ENST00000575909 PRB1P04280 392 aa2.82□□□□□ -1.96
TOM1L1-222ENST00000575909 CACNA1CQ13936 2221 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms