RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 DPM2O94777 84 aa7.3□□□□□ -1.24
CCDC40-210ENST00000573903 HERVK_113P61574 105 aa7.3□□□□□ -1.24
CCDC40-210ENST00000573903 ERG28Q9UKR5 140 aa7.3□□□□□ -1.24
CCDC40-210ENST00000573903 PFN2P35080 140 aa7.29□□□□□ -1.24
CCDC40-210ENST00000573903 COX17Q14061 63 aa7.29□□□□□ -1.24
CCDC40-210ENST00000573903 C22orf24Q9Y442 160 aa7.29□□□□□ -1.24
CCDC40-210ENST00000573903 LPAP08519 4548 aa7.29□□□□□ -1.24
CCDC40-210ENST00000573903 IGKCP01834 107 aa7.28□□□□□ -1.24
CCDC40-210ENST00000573903 ZNF625Q96I27 306 aaPredicted RBP7.28□□□□□ -1.24
CCDC40-210ENST00000573903 TP73-AS1Q9UF72 201 aa7.28□□□□□ -1.24
CCDC40-210ENST00000573903 A0A0U1RQV1 116 aa7.27□□□□□ -1.25
CCDC40-210ENST00000573903 RPL28P46779 137 aaKnown RBP7.27□□□□□ -1.25
CCDC40-210ENST00000573903 HERV-K104P63124 156 aa7.27□□□□□ -1.25
CCDC40-210ENST00000573903 COA6Q5JTJ3 125 aaKnown RBP7.27□□□□□ -1.25
CCDC40-210ENST00000573903 MRPL55Q7Z7F7 128 aaKnown RBP7.26□□□□□ -1.25
CCDC40-210ENST00000573903 NKAPP1Q8N9T2 125 aa7.26□□□□□ -1.25
CCDC40-210ENST00000573903 PLEKHB2Q96CS7 222 aa7.26□□□□□ -1.25
CCDC40-210ENST00000573903 PMCHL2Q9BQD1 86 aa7.26□□□□□ -1.25
CCDC40-210ENST00000573903 MYMXA0A1B0GTQ4 84 aa7.25□□□□□ -1.25
CCDC40-210ENST00000573903 SYS1-DBNDD2H3BUS1 97 aa7.25□□□□□ -1.25
CCDC40-210ENST00000573903 LEPROTO15243 131 aa7.25□□□□□ -1.25
CCDC40-210ENST00000573903 MEIG1Q5JSS6 88 aa7.25□□□□□ -1.25
CCDC40-210ENST00000573903 NDUFA12Q9UI09 145 aa7.25□□□□□ -1.25
CCDC40-210ENST00000573903 IGLV5-37A0A075B6J1 123 aa7.24□□□□□ -1.25
CCDC40-210ENST00000573903 LINC00587B1AMM8 73 aa7.24□□□□□ -1.25
CCDC40-210ENST00000573903 BCE1O60756 84 aa7.24□□□□□ -1.25
CCDC40-210ENST00000573903 TSPAN13O95857 204 aa7.24□□□□□ -1.25
CCDC40-210ENST00000573903 LINC00158P58513 81 aa7.24□□□□□ -1.25
CCDC40-210ENST00000573903 PET117Q6UWS5 81 aa7.24□□□□□ -1.25
CCDC40-210ENST00000573903 SND1-IT1Q9HBX3 110 aa7.24□□□□□ -1.25
CCDC40-210ENST00000573903 J3QQQ9 107 aa7.23□□□□□ -1.25
CCDC40-210ENST00000573903 CRYGAP11844 174 aa7.23□□□□□ -1.25
CCDC40-210ENST00000573903 LGALS3P17931 250 aaKnown RBP7.23□□□□□ -1.25
CCDC40-210ENST00000573903 NMUP48645 174 aa7.23□□□□□ -1.25
CCDC40-210ENST00000573903 RPL24P83731 157 aaKnown RBP7.23□□□□□ -1.25
CCDC40-210ENST00000573903 TYMSOSQ8TAI1 123 aa7.23□□□□□ -1.25
CCDC40-210ENST00000573903 C20orf202A1L168 122 aa7.22□□□□□ -1.25
CCDC40-210ENST00000573903 TSPEAR-AS2P59090 65 aa7.22□□□□□ -1.25
CCDC40-210ENST00000573903 LINC01545Q5VT33 79 aa7.22□□□□□ -1.25
CCDC40-210ENST00000573903 A0A0U1RRA0 63 aa7.21□□□□□ -1.26
CCDC40-210ENST00000573903 SMIM13P0DJ93 91 aa7.21□□□□□ -1.26
CCDC40-210ENST00000573903 KRTDAPP60985 99 aa7.21□□□□□ -1.26
CCDC40-210ENST00000573903 A0A087X002 238 aa7.2□□□□□ -1.26
CCDC40-210ENST00000573903 GAGE10A6NGK3 116 aa7.2□□□□□ -1.26
CCDC40-210ENST00000573903 RPL37AP8A6NKH3 93 aa7.2□□□□□ -1.26
CCDC40-210ENST00000573903 E9PLD3 99 aa7.2□□□□□ -1.26
CCDC40-210ENST00000573903 C3orf79P0CE67 100 aa7.2□□□□□ -1.26
CCDC40-210ENST00000573903 VPREB1P12018 145 aa7.2□□□□□ -1.26
CCDC40-210ENST00000573903 UBE2AP49459 152 aa7.2□□□□□ -1.26
CCDC40-210ENST00000573903 LINC00167Q96N53 147 aa7.2□□□□□ -1.26
CCDC40-210ENST00000573903 AKR1D1P51857 326 aa7.19□□□□□ -1.26
CCDC40-210ENST00000573903 MIR7-3HGQ8N6C7 128 aa7.19□□□□□ -1.26
CCDC40-210ENST00000573903 S100A6P06703 90 aa7.18□□□□□ -1.26
CCDC40-210ENST00000573903 S100A2P29034 98 aa7.18□□□□□ -1.26
CCDC40-210ENST00000573903 MIEN1Q9BRT3 115 aa7.17□□□□□ -1.26
CCDC40-210ENST00000573903 IGKV2-28A0A075B6P5 120 aa7.16□□□□□ -1.26
CCDC40-210ENST00000573903 IGKV2D-28P01615 120 aa7.16□□□□□ -1.26
CCDC40-210ENST00000573903 BOD1L2Q8IYS8 172 aa7.16□□□□□ -1.26
CCDC40-210ENST00000573903 FAM229BQ4G0N7 80 aa7.15□□□□□ -1.26
CCDC40-210ENST00000573903 HIST3H2BBQ8N257 126 aa7.15□□□□□ -1.26
CCDC40-210ENST00000573903 LINC00304Q8N9R0 145 aa7.15□□□□□ -1.26
CCDC40-210ENST00000573903 IGKV2D-26A0A0A0MRZ7 120 aa7.14□□□□□ -1.27
CCDC40-210ENST00000573903 M0R378 163 aa7.14□□□□□ -1.27
CCDC40-210ENST00000573903 Q8NDZ9 215 aa7.14□□□□□ -1.27
CCDC40-210ENST00000573903 ANAPC11Q9NYG5 84 aa7.14□□□□□ -1.27
CCDC40-210ENST00000573903 A0A0J9YXY3 114 aa7.13□□□□□ -1.27
CCDC40-210ENST00000573903 DAND5Q8N907 189 aa7.13□□□□□ -1.27
CCDC40-210ENST00000573903 HIST1H2BLQ99880 126 aa7.13□□□□□ -1.27
CCDC40-210ENST00000573903 ZNF815PA8K554 130 aa7.12□□□□□ -1.27
CCDC40-210ENST00000573903 NCR3O14931 201 aa7.12□□□□□ -1.27
CCDC40-210ENST00000573903 S100A12P80511 92 aa7.12□□□□□ -1.27
CCDC40-210ENST00000573903 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
CCDC40-210ENST00000573903 FAM19A1Q7Z5A9 133 aa7.12□□□□□ -1.27
CCDC40-210ENST00000573903 KRTAP13-1Q8IUC0 172 aa7.12□□□□□ -1.27
CCDC40-210ENST00000573903 RETNLBQ9BQ08 111 aa7.12□□□□□ -1.27
CCDC40-210ENST00000573903 TMEM126AQ9H061 195 aa7.12□□□□□ -1.27
CCDC40-210ENST00000573903 LOC107984156A0A0G2JMH3 177 aa7.11□□□□□ -1.27
CCDC40-210ENST00000573903 PRLHP81277 87 aa7.11□□□□□ -1.27
CCDC40-210ENST00000573903 ARL17AQ8IVW1 177 aa7.11□□□□□ -1.27
CCDC40-210ENST00000573903 CDIP1Q9H305 208 aa7.11□□□□□ -1.27
CCDC40-210ENST00000573903 TMEM238C9JI98 176 aa7.1□□□□□ -1.27
CCDC40-210ENST00000573903 PRYO14603 147 aa7.1□□□□□ -1.27
CCDC40-210ENST00000573903 TIMM17BO60830 172 aa7.1□□□□□ -1.27
CCDC40-210ENST00000573903 SNRPEP62304 92 aaKnown RBP7.1□□□□□ -1.27
CCDC40-210ENST00000573903 ATOH7Q8N100 152 aa7.1□□□□□ -1.27
CCDC40-210ENST00000573903 SPANXB1Q9NS25 103 aaPredicted RBP7.1□□□□□ -1.27
CCDC40-210ENST00000573903 TRBV10-2A0A0K0K1G8 114 aa7.09□□□□□ -1.27
CCDC40-210ENST00000573903 NDUFC2O95298 119 aa7.09□□□□□ -1.27
CCDC40-210ENST00000573903 CTAG1AP78358 180 aa7.09□□□□□ -1.27
CCDC40-210ENST00000573903 NPC2P61916 151 aa7.08□□□□□ -1.28
CCDC40-210ENST00000573903 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
CCDC40-210ENST00000573903 ANKRD39Q53RE8 183 aa7.08□□□□□ -1.28
CCDC40-210ENST00000573903 SCGB1D4Q6XE38 83 aa7.08□□□□□ -1.28
CCDC40-210ENST00000573903 IGLV7-46A0A075B6I9 117 aa7.07□□□□□ -1.28
CCDC40-210ENST00000573903 HSBP1L1C9JCN9 74 aa7.07□□□□□ -1.28
CCDC40-210ENST00000573903 TTTY13Q9BZ97 58 aa7.07□□□□□ -1.28
CCDC40-210ENST00000573903 MUC2Q02817 5179 aa7.07□□□□□ -1.28
CCDC40-210ENST00000573903 TRBV10-3A0A0K0K1G6 114 aa7.06□□□□□ -1.28
CCDC40-210ENST00000573903 DDTP30046 118 aa7.06□□□□□ -1.28
CCDC40-210ENST00000573903 S100A7L2Q5SY68 101 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms