RNA–Protein interactions for RNA: ENST00000573169.1

NUP88-206, Transcript of nucleoporin 88, humanhuman

TSL 1 (best)

Gene NUP88, Length 1,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-206ENST00000573169 KLK5Q9Y337 293 aaPredicted RBP4.61□□□□□ -1.67
NUP88-206ENST00000573169 IGKV2-28A0A075B6P5 120 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 A0A0J9YWU9 116 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 BCE1O60756 84 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 IGKV2D-28P01615 120 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 RPL35AP18077 110 aaKnown RBP4.6□□□□□ -1.67
NUP88-206ENST00000573169 NPC2P61916 151 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 DEFB135Q30KP9 77 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 ODF3L2Q3SX64 289 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 C5orf47Q569G3 176 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 DGAT2L7PQ6IED9 249 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 GAGE2AQ6NT46 116 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 LYPD5Q6UWN5 251 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 NTM-AS1Q6ZSK4 140 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 SERP2Q8N6R1 65 aa4.6□□□□□ -1.67
NUP88-206ENST00000573169 TRAV25A0A0B4J276 109 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 TRBV10-3A0A0K0K1G6 114 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 KNCNA6PVL3 124 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 IBA57-AS1B1ANH7 110 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 NDUFC2-KCTD14E9PQ53 114 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 LY6G6CO95867 125 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 INSP01308 110 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 CRPP02741 224 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 DEFB131AP59861 70 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 RPL36AP83881 106 aaKnown RBP4.59□□□□□ -1.67
NUP88-206ENST00000573169 ATP5EP2Q5VTU8 51 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 LINC01561Q8N1V8 128 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 LINC00476Q8WZB0 136 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 RPL36ALQ969Q0 106 aaKnown RBP4.59□□□□□ -1.67
NUP88-206ENST00000573169 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.67
NUP88-206ENST00000573169 DNAH10Q8IVF4 4471 aa4.58□□□□□ -1.68
NUP88-206ENST00000573169 IGHV3-73A0A0B4J1V6 119 aa4.58□□□□□ -1.68
NUP88-206ENST00000573169 SMIM9A6NGZ8 99 aa4.58□□□□□ -1.68
NUP88-206ENST00000573169 S100A7L2Q5SY68 101 aa4.58□□□□□ -1.68
NUP88-206ENST00000573169 LINC00337Q8N6G1 96 aa4.58□□□□□ -1.68
NUP88-206ENST00000573169 MAP6D1Q9H9H5 199 aa4.58□□□□□ -1.68
NUP88-206ENST00000573169 K7EQD1 137 aa4.57□□□□□ -1.68
NUP88-206ENST00000573169 APOC4P55056 127 aa4.57□□□□□ -1.68
NUP88-206ENST00000573169 OR13C6PQ8NH95 151 aa4.57□□□□□ -1.68
NUP88-206ENST00000573169 SMIM11BQ8TCY0 68 aa4.57□□□□□ -1.68
NUP88-206ENST00000573169 COX7B2Q8TF08 81 aa4.57□□□□□ -1.68
NUP88-206ENST00000573169 SND1-IT1Q9HBX3 110 aa4.57□□□□□ -1.68
NUP88-206ENST00000573169 A0A087WZ39 114 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 IGHV3OR16-9A0A0B4J2B5 98 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 IGHV3-38A0A0C4DH36 116 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 EPM2AB3EWF7 344 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 DEFB4AO15263 64 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 DNAL4O96015 105 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 CCKP06307 115 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 CCL18P55774 89 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 FAM19A5Q7Z5A7 132 aaPredicted RBP4.56□□□□□ -1.68
NUP88-206ENST00000573169 C1orf158Q8N1D5 194 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 DPH3Q96FX2 82 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 TMEM243Q9BU79 118 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 LINC00846Q9NV44 126 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 NACAE9PAV3 2078 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 VPS13DQ5THJ4 4388 aa4.56□□□□□ -1.68
NUP88-206ENST00000573169 A0A087WYN8 130 aa4.55□□□□□ -1.68
NUP88-206ENST00000573169 TRBV6-4A0A1B0GX49 114 aa4.55□□□□□ -1.68
NUP88-206ENST00000573169 NUPR2A6NF83 97 aa4.55□□□□□ -1.68
NUP88-206ENST00000573169 USP17L23D6RBM5 183 aa4.55□□□□□ -1.68
NUP88-206ENST00000573169 JMJD7-PLA2G4BH0Y9G9 81 aa4.55□□□□□ -1.68
NUP88-206ENST00000573169 NDUFC2O95298 119 aa4.55□□□□□ -1.68
NUP88-206ENST00000573169 NANOS2P60321 138 aaKnown RBP4.55□□□□□ -1.68
NUP88-206ENST00000573169 SS18Q15532 418 aa4.55□□□□□ -1.68
NUP88-206ENST00000573169 MIR7-3HGQ8N6C7 128 aa4.55□□□□□ -1.68
NUP88-206ENST00000573169 KIR2DL5BQ8NHK3 375 aa4.55□□□□□ -1.68
NUP88-206ENST00000573169 HERC2O95714 4834 aa4.55□□□□□ -1.68
NUP88-206ENST00000573169 FRAS1Q86XX4 4008 aa4.55□□□□□ -1.68
NUP88-206ENST00000573169 KMT2AQ03164 3969 aa4.54□□□□□ -1.68
NUP88-206ENST00000573169 TRAV13-1A0A0B4J241 112 aa4.54□□□□□ -1.68
NUP88-206ENST00000573169 hADV29S1A0JD25 119 aa4.54□□□□□ -1.68
NUP88-206ENST00000573169 CMC4P56277 68 aaPredicted RBP4.54□□□□□ -1.68
NUP88-206ENST00000573169 C9orf129Q5T035 196 aaKnown RBP4.54□□□□□ -1.68
NUP88-206ENST00000573169 Q9HAA7 133 aa4.54□□□□□ -1.68
NUP88-206ENST00000573169 LOC107984640A0A0U1RRK4 108 aa4.53□□□□□ -1.68
NUP88-206ENST00000573169 PRM2P04554 102 aa4.53□□□□□ -1.68
NUP88-206ENST00000573169 C11orf45Q8TAV5 145 aa4.53□□□□□ -1.68
NUP88-206ENST00000573169 ORMDL1Q9P0S3 153 aa4.53□□□□□ -1.68
NUP88-206ENST00000573169 DNAH6Q9C0G6 4158 aa4.52□□□□□ -1.69
NUP88-206ENST00000573169 A0A0U1RRA0 63 aa4.52□□□□□ -1.69
NUP88-206ENST00000573169 H3BQ85 93 aa4.52□□□□□ -1.69
NUP88-206ENST00000573169 GIG44P09565 113 aaPredicted RBP4.52□□□□□ -1.69
NUP88-206ENST00000573169 HTN1P15515 57 aa4.52□□□□□ -1.69
NUP88-206ENST00000573169 CYSTM1Q9H1C7 97 aa4.52□□□□□ -1.69
NUP88-206ENST00000573169 C14orf132Q9NPU4 83 aa4.52□□□□□ -1.69
NUP88-206ENST00000573169 LOC110117498A0A087WWA1 95 aa4.51□□□□□ -1.69
NUP88-206ENST00000573169 TRGV1A0A0A0MS02 117 aa4.51□□□□□ -1.69
NUP88-206ENST00000573169 PLAC8L1A1L4L8 177 aa4.51□□□□□ -1.69
NUP88-206ENST00000573169 TMEM256-PLSCR3K7ERE1 68 aa4.51□□□□□ -1.69
NUP88-206ENST00000573169 UBE2L6O14933 153 aa4.51□□□□□ -1.69
NUP88-206ENST00000573169 LECT2O14960 151 aa4.51□□□□□ -1.69
NUP88-206ENST00000573169 LINC00158P58513 81 aa4.51□□□□□ -1.69
NUP88-206ENST00000573169 COX17Q14061 63 aa4.51□□□□□ -1.69
NUP88-206ENST00000573169 Q6ZTI0 123 aa4.51□□□□□ -1.69
NUP88-206ENST00000573169 Q8IZM0 81 aa4.51□□□□□ -1.69
NUP88-206ENST00000573169 C16orf74Q96GX8 76 aa4.51□□□□□ -1.69
NUP88-206ENST00000573169 TRBV6-8A0A0A6YYG3 113 aa4.5□□□□□ -1.69
NUP88-206ENST00000573169 IGHV4-28A0A0C4DH34 117 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms