RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 RPL35AP18077 110 aaKnown RBP10.6□□□□□ -0.71
SMG6-207ENST00000570756 CXCL6P80162 114 aa10.6□□□□□ -0.71
SMG6-207ENST00000570756 NIPBLQ6KC79 2804 aaeCLIP10.6□□□□□ -0.71
SMG6-207ENST00000570756 IGHV4-31P0DP07 118 aa10.59□□□□□ -0.71
SMG6-207ENST00000570756 Q6ZVQ6 151 aa10.59□□□□□ -0.71
SMG6-207ENST00000570756 IGHV4-28A0A0C4DH34 117 aa10.59□□□□□ -0.71
SMG6-207ENST00000570756 CLPSL2Q6UWE3 100 aa10.58□□□□□ -0.72
SMG6-207ENST00000570756 WNK1Q9H4A3 2382 aa10.58□□□□□ -0.72
SMG6-207ENST00000570756 KIAA0087Q14695 138 aa10.58□□□□□ -0.72
SMG6-207ENST00000570756 CSNK1G2-AS1Q8NCQ2 148 aa10.58□□□□□ -0.72
SMG6-207ENST00000570756 CD164L2Q6UWJ8 174 aa10.57□□□□□ -0.72
SMG6-207ENST00000570756 NDUFC1O43677 76 aa10.57□□□□□ -0.72
SMG6-207ENST00000570756 GYPEP15421 78 aa10.57□□□□□ -0.72
SMG6-207ENST00000570756 C9orf66Q5T8R8 295 aa10.56□□□□□ -0.72
SMG6-207ENST00000570756 PRO0628Q9UI54 55 aa10.56□□□□□ -0.72
SMG6-207ENST00000570756 F8P00451 2351 aa10.56□□□□□ -0.72
SMG6-207ENST00000570756 SMIM26A0A096LP01 95 aa10.55□□□□□ -0.72
SMG6-207ENST00000570756 TRAV10A0A0B4J240 114 aa10.55□□□□□ -0.72
SMG6-207ENST00000570756 MUC7Q8TAX7 377 aa10.55□□□□□ -0.72
SMG6-207ENST00000570756 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
SMG6-207ENST00000570756 DEFB130BP0DP73 79 aa10.55□□□□□ -0.72
SMG6-207ENST00000570756 DEFB130AP0DP74 79 aa10.55□□□□□ -0.72
SMG6-207ENST00000570756 SNURFQ9Y675 71 aa10.54□□□□□ -0.72
SMG6-207ENST00000570756 F8WEM9 126 aa10.54□□□□□ -0.72
SMG6-207ENST00000570756 ATP5EP56381 51 aaPredicted RBP10.54□□□□□ -0.72
SMG6-207ENST00000570756 C9orf116Q5BN46 136 aaPredicted RBP10.53□□□□□ -0.72
SMG6-207ENST00000570756 RMI2Q96E14 147 aa10.53□□□□□ -0.72
SMG6-207ENST00000570756 NSD1Q96L73 2696 aaPredicted RBP10.53□□□□□ -0.72
SMG6-207ENST00000570756 ANK3Q12955 4377 aaKnown RBP10.53□□□□□ -0.72
SMG6-207ENST00000570756 M0R2N4 97 aa10.53□□□□□ -0.72
SMG6-207ENST00000570756 LINC00269Q8N2A0 174 aa10.53□□□□□ -0.72
SMG6-207ENST00000570756 CHCHD10Q8WYQ3 142 aaPredicted RBP10.53□□□□□ -0.72
SMG6-207ENST00000570756 SMR3AQ99954 134 aa10.53□□□□□ -0.72
SMG6-207ENST00000570756 Q8N3U1 123 aa10.52□□□□□ -0.73
SMG6-207ENST00000570756 Q8NDZ9 215 aa10.52□□□□□ -0.73
SMG6-207ENST00000570756 Q6ZQY7 126 aa10.52□□□□□ -0.73
SMG6-207ENST00000570756 C19orf73Q9NVV2 129 aa10.51□□□□□ -0.73
SMG6-207ENST00000570756 SETD2Q9BYW2 2564 aaPredicted RBP10.51□□□□□ -0.73
SMG6-207ENST00000570756 LINC00336Q6ZUF6 198 aa10.5□□□□□ -0.73
SMG6-207ENST00000570756 IGLV6-57P01721 117 aa10.5□□□□□ -0.73
SMG6-207ENST00000570756 JMJD1CQ15652 2540 aa10.5□□□□□ -0.73
SMG6-207ENST00000570756 HIVEP2P31629 2446 aa10.5□□□□□ -0.73
SMG6-207ENST00000570756 LINC00612Q8N6U2 182 aa10.49□□□□□ -0.73
SMG6-207ENST00000570756 PRO0255Q9UI72 69 aa10.49□□□□□ -0.73
SMG6-207ENST00000570756 IGLV1-51P01701 117 aa10.48□□□□□ -0.73
SMG6-207ENST00000570756 REG3AQ06141 175 aa10.48□□□□□ -0.73
SMG6-207ENST00000570756 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
SMG6-207ENST00000570756 TRBV7-4A0A0J9YYF1 115 aa10.47□□□□□ -0.73
SMG6-207ENST00000570756 ANGP03950 147 aaKnown RBP10.47□□□□□ -0.73
SMG6-207ENST00000570756 SPATA3Q8NHX4 192 aa10.47□□□□□ -0.73
SMG6-207ENST00000570756 MIFP14174 115 aa10.47□□□□□ -0.73
SMG6-207ENST00000570756 FP248Q71RG6 208 aaPredicted RBP10.47□□□□□ -0.73
SMG6-207ENST00000570756 TM2D3Q9BRN9 247 aa10.47□□□□□ -0.73
SMG6-207ENST00000570756 A0A096LPF7 62 aa10.46□□□□□ -0.73
SMG6-207ENST00000570756 C16orf95Q9H693 158 aa10.46□□□□□ -0.73
SMG6-207ENST00000570756 TRBV7-6A0A0J9YX20 115 aa10.46□□□□□ -0.74
SMG6-207ENST00000570756 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.46□□□□□ -0.74
SMG6-207ENST00000570756 DIRC1Q969H9 104 aa10.46□□□□□ -0.74
SMG6-207ENST00000570756 KRTAP1-1Q07627 177 aa10.45□□□□□ -0.74
SMG6-207ENST00000570756 SPAG11BQ08648 103 aa10.45□□□□□ -0.74
SMG6-207ENST00000570756 NREPQ16612 68 aa10.45□□□□□ -0.74
SMG6-207ENST00000570756 LINC01006Q8NI28 216 aa10.45□□□□□ -0.74
SMG6-207ENST00000570756 A0A0J9YWU9 116 aa10.44□□□□□ -0.74
SMG6-207ENST00000570756 ERC2-IT1O76042 136 aa10.44□□□□□ -0.74
SMG6-207ENST00000570756 IGHV4-30-4P0DP06 118 aa10.44□□□□□ -0.74
SMG6-207ENST00000570756 FN1P02751 2386 aaKnown RBP10.44□□□□□ -0.74
SMG6-207ENST00000570756 DNAJC9-AS1A6NH13 148 aa10.44□□□□□ -0.74
SMG6-207ENST00000570756 UNQ6190/PRO20217Q6UXQ8 127 aa10.44□□□□□ -0.74
SMG6-207ENST00000570756 C10orf25Q5T742 122 aa10.43□□□□□ -0.74
SMG6-207ENST00000570756 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
SMG6-207ENST00000570756 BPY2O14599 106 aa10.42□□□□□ -0.74
SMG6-207ENST00000570756 TMEM254Q8TBM7 123 aa10.42□□□□□ -0.74
SMG6-207ENST00000570756 C1orf43Q9BWL3 253 aa10.41□□□□□ -0.74
SMG6-207ENST00000570756 COX7BP24311 80 aa10.41□□□□□ -0.74
SMG6-207ENST00000570756 ZNF73O43830 326 aaPredicted RBP10.39□□□□□ -0.75
SMG6-207ENST00000570756 GVQW2A0A096LPI5 108 aaPredicted RBP10.38□□□□□ -0.75
SMG6-207ENST00000570756 ELOF1P60002 83 aaKnown RBP10.37□□□□□ -0.75
SMG6-207ENST00000570756 LINC00474Q9P2X8 69 aa10.37□□□□□ -0.75
SMG6-207ENST00000570756 LYRM9A8MSI8 78 aa10.36□□□□□ -0.75
SMG6-207ENST00000570756 X6R8D5 127 aa10.36□□□□□ -0.75
SMG6-207ENST00000570756 ATRQ13535 2644 aa10.34□□□□□ -0.75
SMG6-207ENST00000570756 PRYO14603 147 aa10.34□□□□□ -0.75
SMG6-207ENST00000570756 ESM1Q9NQ30 184 aa10.34□□□□□ -0.75
SMG6-207ENST00000570756 INAFM1C9JVW0 142 aa10.33□□□□□ -0.76
SMG6-207ENST00000570756 XAGE1AQ9HD64 81 aa10.33□□□□□ -0.76
SMG6-207ENST00000570756 BRK1Q8WUW1 75 aa10.32□□□□□ -0.76
SMG6-207ENST00000570756 IGKV4-1P06312 121 aa10.32□□□□□ -0.76
SMG6-207ENST00000570756 C6orf48Q9UBA6 75 aa10.32□□□□□ -0.76
SMG6-207ENST00000570756 A0A0U1RQV1 116 aa10.31□□□□□ -0.76
SMG6-207ENST00000570756 OCR1Q9BZK8 76 aa10.31□□□□□ -0.76
SMG6-207ENST00000570756 PKIGQ9Y2B9 76 aa10.31□□□□□ -0.76
SMG6-207ENST00000570756 FUSP35637 526 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMG6-207ENST00000570756 TENM1Q9UKZ4 2725 aa10.3□□□□□ -0.76
SMG6-207ENST00000570756 PRR34Q9NV39 138 aa10.29□□□□□ -0.76
SMG6-207ENST00000570756 LELP1Q5T871 98 aa10.29□□□□□ -0.76
SMG6-207ENST00000570756 Q8N9L7 120 aa10.29□□□□□ -0.76
SMG6-207ENST00000570756 ESRGQ1W209 222 aa10.28□□□□□ -0.76
SMG6-207ENST00000570756 M0R378 163 aa10.28□□□□□ -0.76
SMG6-207ENST00000570756 KLK12Q9UKR0 248 aa10.28□□□□□ -0.76
SMG6-207ENST00000570756 DAD1P61803 113 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms