RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 UNQ6190/PRO20217Q6UXQ8 127 aa10.39□□□□□ -0.75
SNX20-204ENST00000568993 UPK3BQ9BT76 320 aa10.39□□□□□ -0.75
SNX20-204ENST00000568993 SNCGO76070 127 aa10.38□□□□□ -0.75
SNX20-204ENST00000568993 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
SNX20-204ENST00000568993 C1orf43Q9BWL3 253 aa10.38□□□□□ -0.75
SNX20-204ENST00000568993 SMCPP49901 116 aaPredicted RBP10.38□□□□□ -0.75
SNX20-204ENST00000568993 ATXN8Q156A1 80 aa10.38□□□□□ -0.75
SNX20-204ENST00000568993 C10orf25Q5T742 122 aa10.38□□□□□ -0.75
SNX20-204ENST00000568993 LINC00337Q8N6G1 96 aa10.38□□□□□ -0.75
SNX20-204ENST00000568993 C9orf116Q5BN46 136 aaPredicted RBP10.36□□□□□ -0.75
SNX20-204ENST00000568993 NDUFC2O95298 119 aa10.36□□□□□ -0.75
SNX20-204ENST00000568993 LINC00526Q96FQ7 95 aa10.35□□□□□ -0.75
SNX20-204ENST00000568993 RPL28P46779 137 aaKnown RBP10.34□□□□□ -0.75
SNX20-204ENST00000568993 TEN1Q86WV5 123 aa10.34□□□□□ -0.75
SNX20-204ENST00000568993 C15orf56Q8N910 161 aa10.34□□□□□ -0.75
SNX20-204ENST00000568993 IGKV2D-24A0A075B6R9 120 aa10.34□□□□□ -0.75
SNX20-204ENST00000568993 ZNF561-AS1K7EIQ3 104 aa10.34□□□□□ -0.75
SNX20-204ENST00000568993 C2orf48Q96LS8 159 aa10.34□□□□□ -0.75
SNX20-204ENST00000568993 LINC01600Q96MT4 127 aa10.34□□□□□ -0.75
SNX20-204ENST00000568993 LST1O00453 97 aa10.33□□□□□ -0.76
SNX20-204ENST00000568993 LINC01620Q4KN68 170 aa10.33□□□□□ -0.76
SNX20-204ENST00000568993 C6orf48Q9UBA6 75 aa10.33□□□□□ -0.76
SNX20-204ENST00000568993 CLEC2BQ92478 149 aa10.31□□□□□ -0.76
SNX20-204ENST00000568993 DYNC2H1Q8NCM8 4307 aaKnown RBP10.31□□□□□ -0.76
SNX20-204ENST00000568993 HIGD2BQ4VC39 106 aa10.31□□□□□ -0.76
SNX20-204ENST00000568993 SLC25A20O43772 301 aa10.3□□□□□ -0.76
SNX20-204ENST00000568993 CAMK2N2Q96S95 79 aa10.3□□□□□ -0.76
SNX20-204ENST00000568993 Q9HAA7 133 aa10.3□□□□□ -0.76
SNX20-204ENST00000568993 PRO0628Q9UI54 55 aa10.3□□□□□ -0.76
SNX20-204ENST00000568993 APLNQ9ULZ1 77 aa10.3□□□□□ -0.76
SNX20-204ENST00000568993 TRBV10-2A0A0K0K1G8 114 aa10.29□□□□□ -0.76
SNX20-204ENST00000568993 SMIM11BQ8TCY0 68 aa10.29□□□□□ -0.76
SNX20-204ENST00000568993 RMI2Q96E14 147 aa10.28□□□□□ -0.76
SNX20-204ENST00000568993 DNAH1Q9P2D7 4330 aa10.27□□□□□ -0.76
SNX20-204ENST00000568993 ANKRD29Q8N6D5 301 aa10.27□□□□□ -0.77
SNX20-204ENST00000568993 V9GYY9 64 aa10.27□□□□□ -0.77
SNX20-204ENST00000568993 Q6ZRU5 148 aa10.26□□□□□ -0.77
SNX20-204ENST00000568993 PRR3P79522 188 aaKnown RBP10.26□□□□□ -0.77
SNX20-204ENST00000568993 Q8NDZ9 215 aa10.26□□□□□ -0.77
SNX20-204ENST00000568993 H3BT86 120 aa10.25□□□□□ -0.77
SNX20-204ENST00000568993 TRACP01848 142 aa10.25□□□□□ -0.77
SNX20-204ENST00000568993 C4orf26Q17RF5 130 aa10.25□□□□□ -0.77
SNX20-204ENST00000568993 C9orf153Q5TBE3 101 aa10.25□□□□□ -0.77
SNX20-204ENST00000568993 C3orf22Q8N5N4 141 aa10.25□□□□□ -0.77
SNX20-204ENST00000568993 H0YGX0 51 aa10.24□□□□□ -0.77
SNX20-204ENST00000568993 HRCT1Q6UXD1 115 aa10.24□□□□□ -0.77
SNX20-204ENST00000568993 Q5XG85 94 aa10.24□□□□□ -0.77
SNX20-204ENST00000568993 SYCNQ0VAF6 134 aa10.23□□□□□ -0.77
SNX20-204ENST00000568993 KRTAP21-3Q3LHN1 58 aa10.23□□□□□ -0.77
SNX20-204ENST00000568993 NUPR2A6NF83 97 aa10.23□□□□□ -0.77
SNX20-204ENST00000568993 NDUFC2-KCTD14E9PQ53 114 aa10.23□□□□□ -0.77
SNX20-204ENST00000568993 FAM218AQ96MZ4 157 aa10.23□□□□□ -0.77
SNX20-204ENST00000568993 UQCRQO14949 82 aa10.21□□□□□ -0.77
SNX20-204ENST00000568993 DNHD1Q96M86 4753 aa10.21□□□□□ -0.77
SNX20-204ENST00000568993 USP17L23D6RBM5 183 aa10.21□□□□□ -0.78
SNX20-204ENST00000568993 PRKDCP78527 4128 aaKnown RBP10.2□□□□□ -0.78
SNX20-204ENST00000568993 CASC10Q5T4H9 136 aa10.2□□□□□ -0.78
SNX20-204ENST00000568993 NCR3O14931 201 aa10.19□□□□□ -0.78
SNX20-204ENST00000568993 IGLV6-57P01721 117 aa10.19□□□□□ -0.78
SNX20-204ENST00000568993 UBE2DNLQ8IWF7 75 aa10.19□□□□□ -0.78
SNX20-204ENST00000568993 XAGE1AQ9HD64 81 aa10.19□□□□□ -0.78
SNX20-204ENST00000568993 KRTAP1-5Q9BYS1 174 aa10.19□□□□□ -0.78
SNX20-204ENST00000568993 CSMD3Q7Z407 3707 aa10.19□□□□□ -0.78
SNX20-204ENST00000568993 MEGF8Q7Z7M0 2845 aa10.18□□□□□ -0.78
SNX20-204ENST00000568993 TLX1NBP0CAT3 122 aa10.18□□□□□ -0.78
SNX20-204ENST00000568993 FAM236AA0A1B0GUQ0 79 aa10.17□□□□□ -0.78
SNX20-204ENST00000568993 FAM236BA0A1B0GV22 79 aa10.17□□□□□ -0.78
SNX20-204ENST00000568993 S100A7L2Q5SY68 101 aa10.17□□□□□ -0.78
SNX20-204ENST00000568993 DNAH7Q8WXX0 4024 aa10.17□□□□□ -0.78
SNX20-204ENST00000568993 SLPIP03973 132 aa10.17□□□□□ -0.78
SNX20-204ENST00000568993 Q6ZRP5 223 aa10.17□□□□□ -0.78
SNX20-204ENST00000568993 TRBV7-7A0A0K0K1E9 115 aa10.16□□□□□ -0.78
SNX20-204ENST00000568993 VPREB1P12018 145 aa10.16□□□□□ -0.78
SNX20-204ENST00000568993 A0A087WYN8 130 aa10.16□□□□□ -0.78
SNX20-204ENST00000568993 RPL18AQ02543 176 aaKnown RBP10.16□□□□□ -0.78
SNX20-204ENST00000568993 DPH3Q96FX2 82 aa10.16□□□□□ -0.78
SNX20-204ENST00000568993 PLECQ15149 4684 aaKnown RBP10.14□□□□□ -0.79
SNX20-204ENST00000568993 BAALC-AS2P0C853 105 aa10.14□□□□□ -0.79
SNX20-204ENST00000568993 GAGE2AQ6NT46 116 aa10.14□□□□□ -0.79
SNX20-204ENST00000568993 LYSTQ99698 3801 aa10.13□□□□□ -0.79
SNX20-204ENST00000568993 CRYGAP11844 174 aa10.13□□□□□ -0.79
SNX20-204ENST00000568993 TEX49A0A1B0GTD5 131 aa10.12□□□□□ -0.79
SNX20-204ENST00000568993 M0R378 163 aa10.12□□□□□ -0.79
SNX20-204ENST00000568993 C6orf99Q4VX62 202 aa10.12□□□□□ -0.79
SNX20-204ENST00000568993 C9orf129Q5T035 196 aaKnown RBP10.12□□□□□ -0.79
SNX20-204ENST00000568993 TRBV10-3A0A0K0K1G6 114 aa10.12□□□□□ -0.79
SNX20-204ENST00000568993 LECT2O14960 151 aa10.12□□□□□ -0.79
SNX20-204ENST00000568993 DNAL4O96015 105 aa10.12□□□□□ -0.79
SNX20-204ENST00000568993 OXTP01178 125 aa10.12□□□□□ -0.79
SNX20-204ENST00000568993 PKIGQ9Y2B9 76 aa10.12□□□□□ -0.79
SNX20-204ENST00000568993 LINC00167Q96N53 147 aa10.11□□□□□ -0.79
SNX20-204ENST00000568993 C22orf24Q9Y442 160 aa10.11□□□□□ -0.79
SNX20-204ENST00000568993 TENM2Q9NT68 2774 aa10.11□□□□□ -0.79
SNX20-204ENST00000568993 PLA2G2DQ9UNK4 145 aa10.11□□□□□ -0.79
SNX20-204ENST00000568993 TMEM258P61165 79 aa10.1□□□□□ -0.79
SNX20-204ENST00000568993 IMUPQ9GZP8 106 aa10.1□□□□□ -0.79
SNX20-204ENST00000568993 NBDYA0A0U1RRE5 68 aa10.09□□□□□ -0.79
SNX20-204ENST00000568993 Q8N814 137 aa10.09□□□□□ -0.79
SNX20-204ENST00000568993 TRAV23DV6A0A075B6W5 121 aa10.08□□□□□ -0.8
SNX20-204ENST00000568993 LINC00336Q6ZUF6 198 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms