RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 DAND5Q8N907 189 aa4.08□□□□□ -1.76
CAPN3-218ENST00000568153 LINC00308Q8TCZ7 52 aa4.08□□□□□ -1.76
CAPN3-218ENST00000568153 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
CAPN3-218ENST00000568153 PRO1854Q9UHT4 67 aa4.08□□□□□ -1.76
CAPN3-218ENST00000568153 ERG28Q9UKR5 140 aa4.08□□□□□ -1.76
CAPN3-218ENST00000568153 TGP01266 2768 aa4.07□□□□□ -1.76
CAPN3-218ENST00000568153 F8WDY8 70 aa4.07□□□□□ -1.76
CAPN3-218ENST00000568153 H3BUT2 72 aa4.07□□□□□ -1.76
CAPN3-218ENST00000568153 K7ERJ3 54 aa4.07□□□□□ -1.76
CAPN3-218ENST00000568153 NPC2P61916 151 aa4.07□□□□□ -1.76
CAPN3-218ENST00000568153 UNQ6190/PRO20217Q6UXQ8 127 aa4.07□□□□□ -1.76
CAPN3-218ENST00000568153 C6orf223Q8N319 242 aa4.07□□□□□ -1.76
CAPN3-218ENST00000568153 MIR7-3HGQ8N6C7 128 aa4.07□□□□□ -1.76
CAPN3-218ENST00000568153 Q9HAA7 133 aa4.07□□□□□ -1.76
CAPN3-218ENST00000568153 A0A0B4J2C4 111 aa4.06□□□□□ -1.76
CAPN3-218ENST00000568153 A0A1W2PPM0 123 aa4.06□□□□□ -1.76
CAPN3-218ENST00000568153 FABP2P12104 132 aa4.06□□□□□ -1.76
CAPN3-218ENST00000568153 MUC7Q8TAX7 377 aa4.06□□□□□ -1.76
CAPN3-218ENST00000568153 C2orf48Q96LS8 159 aa4.06□□□□□ -1.76
CAPN3-218ENST00000568153 MEGF8Q7Z7M0 2845 aa4.06□□□□□ -1.76
CAPN3-218ENST00000568153 GVQW2A0A096LPI5 108 aaPredicted RBP4.05□□□□□ -1.76
CAPN3-218ENST00000568153 LOC107984156A0A0G2JMH3 177 aa4.05□□□□□ -1.76
CAPN3-218ENST00000568153 SCGB1C2P0DMR2 95 aa4.05□□□□□ -1.76
CAPN3-218ENST00000568153 UBE2V1Q13404 147 aa4.05□□□□□ -1.76
CAPN3-218ENST00000568153 GTF2H5Q6ZYL4 71 aa4.05□□□□□ -1.76
CAPN3-218ENST00000568153 ARL17AQ8IVW1 177 aa4.05□□□□□ -1.76
CAPN3-218ENST00000568153 LINC00526Q96FQ7 95 aa4.05□□□□□ -1.76
CAPN3-218ENST00000568153 CAMK2N2Q96S95 79 aa4.05□□□□□ -1.76
CAPN3-218ENST00000568153 NAA38Q9BRA0 125 aaKnown RBP4.05□□□□□ -1.76
CAPN3-218ENST00000568153 TENM3Q9P273 2699 aa4.04□□□□□ -1.76
CAPN3-218ENST00000568153 TRAV13-2A0A0B4J235 113 aa4.04□□□□□ -1.76
CAPN3-218ENST00000568153 TRBV30A0A0K0K1B3 111 aa4.04□□□□□ -1.76
CAPN3-218ENST00000568153 PSMB2P49721 201 aa4.04□□□□□ -1.76
CAPN3-218ENST00000568153 HIGD2BQ4VC39 106 aa4.04□□□□□ -1.76
CAPN3-218ENST00000568153 C9orf116Q5BN46 136 aaPredicted RBP4.04□□□□□ -1.76
CAPN3-218ENST00000568153 SOSTDC1Q6X4U4 206 aa4.04□□□□□ -1.76
CAPN3-218ENST00000568153 SND1-IT1Q9HBX3 110 aa4.04□□□□□ -1.76
CAPN3-218ENST00000568153 H7C2G1 150 aa4.03□□□□□ -1.76
CAPN3-218ENST00000568153 TSPAN13O95857 204 aa4.03□□□□□ -1.76
CAPN3-218ENST00000568153 COX6CP09669 75 aa4.03□□□□□ -1.76
CAPN3-218ENST00000568153 SYCNQ0VAF6 134 aa4.03□□□□□ -1.76
CAPN3-218ENST00000568153 Q1RN00 199 aa4.03□□□□□ -1.76
CAPN3-218ENST00000568153 TTC32Q5I0X7 151 aa4.03□□□□□ -1.76
CAPN3-218ENST00000568153 LYRM7Q5U5X0 104 aa4.03□□□□□ -1.76
CAPN3-218ENST00000568153 C15orf56Q8N910 161 aa4.03□□□□□ -1.76
CAPN3-218ENST00000568153 SPCS1Q9Y6A9 102 aa4.03□□□□□ -1.76
CAPN3-218ENST00000568153 HUWE1Q7Z6Z7 4374 aaKnown RBP4.03□□□□□ -1.76
CAPN3-218ENST00000568153 TRBV20-1A0A075B6N2 111 aa4.02□□□□□ -1.77
CAPN3-218ENST00000568153 NBDYA0A0U1RRE5 68 aa4.02□□□□□ -1.77
CAPN3-218ENST00000568153 K7EP34 96 aa4.02□□□□□ -1.77
CAPN3-218ENST00000568153 PSCAO43653 123 aa4.02□□□□□ -1.77
CAPN3-218ENST00000568153 Q6ZRU5 148 aa4.02□□□□□ -1.77
CAPN3-218ENST00000568153 SMIM29Q86T20 159 aa4.02□□□□□ -1.77
CAPN3-218ENST00000568153 C6orf48Q9UBA6 75 aa4.02□□□□□ -1.77
CAPN3-218ENST00000568153 NDUFC2O95298 119 aa4.01□□□□□ -1.77
CAPN3-218ENST00000568153 RPL13AP40429 203 aaKnown RBP4.01□□□□□ -1.77
CAPN3-218ENST00000568153 CASC10Q5T4H9 136 aa4.01□□□□□ -1.77
CAPN3-218ENST00000568153 Q75L30 129 aa4.01□□□□□ -1.77
CAPN3-218ENST00000568153 OR13C6PQ8NH95 151 aa4.01□□□□□ -1.77
CAPN3-218ENST00000568153 IGKV2-28A0A075B6P5 120 aa4□□□□□ -1.77
CAPN3-218ENST00000568153 NDUFC2-KCTD14E9PQ53 114 aa4□□□□□ -1.77
CAPN3-218ENST00000568153 IGKV2D-28P01615 120 aa4□□□□□ -1.77
CAPN3-218ENST00000568153 C14orf177Q52M58 125 aa4□□□□□ -1.77
CAPN3-218ENST00000568153 CARD19Q96LW7 228 aa4□□□□□ -1.77
CAPN3-218ENST00000568153 A0A087WYN8 130 aa3.99□□□□□ -1.77
CAPN3-218ENST00000568153 F8W1H4 67 aa3.99□□□□□ -1.77
CAPN3-218ENST00000568153 H3BMG7 143 aa3.99□□□□□ -1.77
CAPN3-218ENST00000568153 C3orf84H3BNL1 204 aa3.99□□□□□ -1.77
CAPN3-218ENST00000568153 M0R2N4 97 aa3.99□□□□□ -1.77
CAPN3-218ENST00000568153 LECT2O14960 151 aa3.99□□□□□ -1.77
CAPN3-218ENST00000568153 TLX1NBP0CAT3 122 aa3.99□□□□□ -1.77
CAPN3-218ENST00000568153 PRR3P79522 188 aaKnown RBP3.99□□□□□ -1.77
CAPN3-218ENST00000568153 GAGE2EQ4V326 116 aa3.99□□□□□ -1.77
CAPN3-218ENST00000568153 TMEM126AQ9H061 195 aa3.99□□□□□ -1.77
CAPN3-218ENST00000568153 GAGE2DQ9UEU5 116 aa3.99□□□□□ -1.77
CAPN3-218ENST00000568153 DNAH9Q9NYC9 4486 aa3.99□□□□□ -1.77
CAPN3-218ENST00000568153 TRBV10-2A0A0K0K1G8 114 aa3.98□□□□□ -1.77
CAPN3-218ENST00000568153 H0YGX0 51 aa3.98□□□□□ -1.77
CAPN3-218ENST00000568153 TCL1BO95988 128 aa3.98□□□□□ -1.77
CAPN3-218ENST00000568153 RPL28P46779 137 aaKnown RBP3.98□□□□□ -1.77
CAPN3-218ENST00000568153 ATXN8Q156A1 80 aa3.98□□□□□ -1.77
CAPN3-218ENST00000568153 S100A7L2Q5SY68 101 aa3.98□□□□□ -1.77
CAPN3-218ENST00000568153 LINC00337Q8N6G1 96 aa3.98□□□□□ -1.77
CAPN3-218ENST00000568153 XAGE1AQ9HD64 81 aa3.98□□□□□ -1.77
CAPN3-218ENST00000568153 LOC107984640A0A0U1RRK4 108 aa3.97□□□□□ -1.77
CAPN3-218ENST00000568153 LY6G6CO95867 125 aa3.97□□□□□ -1.77
CAPN3-218ENST00000568153 Q6ZRP5 223 aa3.97□□□□□ -1.77
CAPN3-218ENST00000568153 SMIM11BQ8TCY0 68 aa3.97□□□□□ -1.77
CAPN3-218ENST00000568153 COL7A1Q02388 2944 aa3.97□□□□□ -1.77
CAPN3-218ENST00000568153 KMT2CQ8NEZ4 4911 aaKnown RBP3.97□□□□□ -1.77
CAPN3-218ENST00000568153 M0R378 163 aa3.96□□□□□ -1.78
CAPN3-218ENST00000568153 NCR3O14931 201 aa3.96□□□□□ -1.78
CAPN3-218ENST00000568153 SNCGO76070 127 aa3.96□□□□□ -1.78
CAPN3-218ENST00000568153 CNBPP62633 177 aaKnown RBP3.96□□□□□ -1.78
CAPN3-218ENST00000568153 RPL18AQ02543 176 aaKnown RBP3.96□□□□□ -1.78
CAPN3-218ENST00000568153 GAGE2BQ13066 116 aa3.96□□□□□ -1.78
CAPN3-218ENST00000568153 C1orf134Q5TEV5 83 aa3.96□□□□□ -1.78
CAPN3-218ENST00000568153 Q6ZR54 194 aa3.96□□□□□ -1.78
CAPN3-218ENST00000568153 CBY1Q9Y3M2 126 aa3.96□□□□□ -1.78
CAPN3-218ENST00000568153 RYR3Q15413 4870 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms