RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 COX7B2Q8TF08 81 aa11.39□□□□□ -0.59
GTF3C1-207ENST00000567806 TOMM7Q9P0U1 55 aa11.39□□□□□ -0.59
GTF3C1-207ENST00000567806 IGLV5-39A0A0G2JS06 123 aa11.38□□□□□ -0.59
GTF3C1-207ENST00000567806 TRBV30A0A0K0K1B3 111 aa11.38□□□□□ -0.59
GTF3C1-207ENST00000567806 SPINK8P0C7L1 97 aa11.38□□□□□ -0.59
GTF3C1-207ENST00000567806 IGLV1-50A0A075B6I6 118 aa11.37□□□□□ -0.59
GTF3C1-207ENST00000567806 M0QXV9 152 aa11.37□□□□□ -0.59
GTF3C1-207ENST00000567806 PLEKHB2Q96CS7 222 aa11.37□□□□□ -0.59
GTF3C1-207ENST00000567806 TMA7Q9Y2S6 64 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-207ENST00000567806 NDUFC2-KCTD14E9PQ53 114 aa11.36□□□□□ -0.59
GTF3C1-207ENST00000567806 C2orf82Q6UX34 121 aa11.36□□□□□ -0.59
GTF3C1-207ENST00000567806 LINC00587B1AMM8 73 aa11.35□□□□□ -0.59
GTF3C1-207ENST00000567806 KRTAP7-1Q8IUC3 87 aa11.35□□□□□ -0.59
GTF3C1-207ENST00000567806 LPAP08519 4548 aa11.35□□□□□ -0.59
GTF3C1-207ENST00000567806 HSBP1L1C9JCN9 74 aa11.34□□□□□ -0.59
GTF3C1-207ENST00000567806 LEPROTO15243 131 aa11.33□□□□□ -0.6
GTF3C1-207ENST00000567806 NMUP48645 174 aa11.33□□□□□ -0.6
GTF3C1-207ENST00000567806 PMCHL2Q9BQD1 86 aa11.33□□□□□ -0.6
GTF3C1-207ENST00000567806 HERV-K104P63124 156 aa11.32□□□□□ -0.6
GTF3C1-207ENST00000567806 C9orf129Q5T035 196 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-207ENST00000567806 E9PLD3 99 aa11.31□□□□□ -0.6
GTF3C1-207ENST00000567806 SCGB1D1O95968 90 aa11.31□□□□□ -0.6
GTF3C1-207ENST00000567806 KRTAP1-4P0C5Y4 121 aa11.31□□□□□ -0.6
GTF3C1-207ENST00000567806 RPL13AP40429 203 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-207ENST00000567806 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
GTF3C1-207ENST00000567806 LGALS3P17931 250 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-207ENST00000567806 COX17Q14061 63 aa11.29□□□□□ -0.6
GTF3C1-207ENST00000567806 J3QQQ9 107 aa11.28□□□□□ -0.6
GTF3C1-207ENST00000567806 PRR4Q16378 134 aa11.28□□□□□ -0.6
GTF3C1-207ENST00000567806 ZNF861PO60384 105 aa11.27□□□□□ -0.61
GTF3C1-207ENST00000567806 LBHQ53QV2 105 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-207ENST00000567806 NDUFA12Q9UI09 145 aa11.27□□□□□ -0.61
GTF3C1-207ENST00000567806 C22orf24Q9Y442 160 aa11.27□□□□□ -0.61
GTF3C1-207ENST00000567806 JOSD1Q15040 202 aaPredicted RBP11.26□□□□□ -0.61
GTF3C1-207ENST00000567806 ZNF625Q96I27 306 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-207ENST00000567806 XAGE1AQ9HD64 81 aa11.23□□□□□ -0.61
GTF3C1-207ENST00000567806 ERG28Q9UKR5 140 aa11.22□□□□□ -0.61
GTF3C1-207ENST00000567806 MEIG1Q5JSS6 88 aa11.21□□□□□ -0.61
GTF3C1-207ENST00000567806 ATOH7Q8N100 152 aa11.2□□□□□ -0.62
GTF3C1-207ENST00000567806 TSPAN13O95857 204 aa11.18□□□□□ -0.62
GTF3C1-207ENST00000567806 RPL28P46779 137 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-207ENST00000567806 MRPL55Q7Z7F7 128 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-207ENST00000567806 TP73-AS1Q9UF72 201 aa11.18□□□□□ -0.62
GTF3C1-207ENST00000567806 ZNF815PA8K554 130 aa11.17□□□□□ -0.62
GTF3C1-207ENST00000567806 LINC00158P58513 81 aa11.17□□□□□ -0.62
GTF3C1-207ENST00000567806 VAMP8Q9BV40 100 aa11.17□□□□□ -0.62
GTF3C1-207ENST00000567806 COPS9Q8WXC6 57 aa11.16□□□□□ -0.62
GTF3C1-207ENST00000567806 BCE1O60756 84 aa11.15□□□□□ -0.62
GTF3C1-207ENST00000567806 TIMM17BO60830 172 aa11.15□□□□□ -0.62
GTF3C1-207ENST00000567806 PFN2P35080 140 aa11.15□□□□□ -0.62
GTF3C1-207ENST00000567806 TSPEAR-AS2P59090 65 aa11.15□□□□□ -0.62
GTF3C1-207ENST00000567806 S100A12P80511 92 aa11.15□□□□□ -0.62
GTF3C1-207ENST00000567806 ANKRD39Q53RE8 183 aa11.15□□□□□ -0.62
GTF3C1-207ENST00000567806 SCGB1D4Q6XE38 83 aa11.15□□□□□ -0.62
GTF3C1-207ENST00000567806 CRYGAP11844 174 aa11.14□□□□□ -0.63
GTF3C1-207ENST00000567806 RPL37AP8A6NKH3 93 aa11.13□□□□□ -0.63
GTF3C1-207ENST00000567806 LINC00167Q96N53 147 aa11.13□□□□□ -0.63
GTF3C1-207ENST00000567806 IGKV2D-26A0A0A0MRZ7 120 aa11.12□□□□□ -0.63
GTF3C1-207ENST00000567806 A0A0J9YXY3 114 aa11.12□□□□□ -0.63
GTF3C1-207ENST00000567806 TMEM238C9JI98 176 aa11.12□□□□□ -0.63
GTF3C1-207ENST00000567806 RPL24P83731 157 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-207ENST00000567806 PYY3Q5JQD4 70 aa11.12□□□□□ -0.63
GTF3C1-207ENST00000567806 Q6ZVH6 145 aa11.12□□□□□ -0.63
GTF3C1-207ENST00000567806 TYMSOSQ8TAI1 123 aa11.12□□□□□ -0.63
GTF3C1-207ENST00000567806 MIEN1Q9BRT3 115 aa11.12□□□□□ -0.63
GTF3C1-207ENST00000567806 A0A087X002 238 aa11.1□□□□□ -0.63
GTF3C1-207ENST00000567806 GAGE10A6NGK3 116 aa11.1□□□□□ -0.63
GTF3C1-207ENST00000567806 DLEU1O43261 78 aa11.1□□□□□ -0.63
GTF3C1-207ENST00000567806 SMIM13P0DJ93 91 aa11.1□□□□□ -0.63
GTF3C1-207ENST00000567806 A0A0U1RQV1 116 aa11.09□□□□□ -0.63
GTF3C1-207ENST00000567806 SPATA45Q537H7 98 aa11.09□□□□□ -0.63
GTF3C1-207ENST00000567806 SMIM6P0DI80 62 aa11.08□□□□□ -0.64
GTF3C1-207ENST00000567806 COX8AP10176 69 aa11.08□□□□□ -0.64
GTF3C1-207ENST00000567806 MIR7-3HGQ8N6C7 128 aa11.08□□□□□ -0.64
GTF3C1-207ENST00000567806 NKAPP1Q8N9T2 125 aa11.08□□□□□ -0.64
GTF3C1-207ENST00000567806 SND1-IT1Q9HBX3 110 aa11.08□□□□□ -0.64
GTF3C1-207ENST00000567806 PAM16Q9Y3D7 125 aa11.08□□□□□ -0.64
GTF3C1-207ENST00000567806 MUC2Q02817 5179 aa11.07□□□□□ -0.64
GTF3C1-207ENST00000567806 UBE2AP49459 152 aa11.07□□□□□ -0.64
GTF3C1-207ENST00000567806 PPDPFQ9H3Y8 114 aa11.07□□□□□ -0.64
GTF3C1-207ENST00000567806 LOC107984156A0A0G2JMH3 177 aa11.06□□□□□ -0.64
GTF3C1-207ENST00000567806 PCP2Q8IVA1 136 aa11.06□□□□□ -0.64
GTF3C1-207ENST00000567806 ARL17AQ8IVW1 177 aa11.06□□□□□ -0.64
GTF3C1-207ENST00000567806 BOD1L2Q8IYS8 172 aa11.06□□□□□ -0.64
GTF3C1-207ENST00000567806 ANAPC11Q9NYG5 84 aa11.06□□□□□ -0.64
GTF3C1-207ENST00000567806 IGLV5-37A0A075B6J1 123 aa11.05□□□□□ -0.64
GTF3C1-207ENST00000567806 A0A0U1RRA0 63 aa11.05□□□□□ -0.64
GTF3C1-207ENST00000567806 IFITM1P13164 125 aa11.05□□□□□ -0.64
GTF3C1-207ENST00000567806 SLC25A34Q6PIV7 304 aa11.04□□□□□ -0.64
GTF3C1-207ENST00000567806 SPANXDQ9BXN6 97 aa11.03□□□□□ -0.64
GTF3C1-207ENST00000567806 SPANXCQ9NY87 97 aa11.03□□□□□ -0.64
GTF3C1-207ENST00000567806 TTTY13Q9BZ97 58 aa11.02□□□□□ -0.65
GTF3C1-207ENST00000567806 SPANXB1Q9NS25 103 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-207ENST00000567806 NDUFC2O95298 119 aa11.01□□□□□ -0.65
GTF3C1-207ENST00000567806 KRTAP13-1Q8IUC0 172 aa11.01□□□□□ -0.65
GTF3C1-207ENST00000567806 CBY1Q9Y3M2 126 aa11.01□□□□□ -0.65
GTF3C1-207ENST00000567806 IGKV2-28A0A075B6P5 120 aa11□□□□□ -0.65
GTF3C1-207ENST00000567806 IGKV2D-28P01615 120 aa11□□□□□ -0.65
GTF3C1-207ENST00000567806 FAM229BQ4G0N7 80 aa11□□□□□ -0.65
GTF3C1-207ENST00000567806 KRTAP13-2Q52LG2 175 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms