RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 LINC00167Q96N53 147 aa6.11□□□□□ -1.43
GTF3C1-206ENST00000566779 ERG28Q9UKR5 140 aa6.11□□□□□ -1.43
GTF3C1-206ENST00000566779 IGKV2-28A0A075B6P5 120 aa6.1□□□□□ -1.43
GTF3C1-206ENST00000566779 NUPR1O60356 82 aa6.1□□□□□ -1.43
GTF3C1-206ENST00000566779 HSBP1O75506 76 aa6.1□□□□□ -1.43
GTF3C1-206ENST00000566779 IGKV2D-28P01615 120 aa6.1□□□□□ -1.43
GTF3C1-206ENST00000566779 FAM19A2Q8N3H0 131 aa6.1□□□□□ -1.43
GTF3C1-206ENST00000566779 IFI27L1Q96BM0 104 aa6.1□□□□□ -1.43
GTF3C1-206ENST00000566779 IGLV5-39A0A0G2JS06 123 aa6.09□□□□□ -1.43
GTF3C1-206ENST00000566779 RPL28P46779 137 aaKnown RBP6.09□□□□□ -1.43
GTF3C1-206ENST00000566779 UBE2AP49459 152 aa6.09□□□□□ -1.43
GTF3C1-206ENST00000566779 CHCHD1Q96BP2 118 aaKnown RBP6.09□□□□□ -1.43
GTF3C1-206ENST00000566779 YPEL4Q96NS1 127 aa6.09□□□□□ -1.43
GTF3C1-206ENST00000566779 TP73-AS1Q9UF72 201 aa6.09□□□□□ -1.43
GTF3C1-206ENST00000566779 ZNF861PO60384 105 aa6.08□□□□□ -1.44
GTF3C1-206ENST00000566779 BCE1O60756 84 aa6.08□□□□□ -1.44
GTF3C1-206ENST00000566779 LINC00158P58513 81 aa6.08□□□□□ -1.44
GTF3C1-206ENST00000566779 SLC7A5P1Q8MH63 180 aa6.08□□□□□ -1.44
GTF3C1-206ENST00000566779 SND1-IT1Q9HBX3 110 aa6.08□□□□□ -1.44
GTF3C1-206ENST00000566779 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
GTF3C1-206ENST00000566779 IGLV1-50A0A075B6I6 118 aa6.07□□□□□ -1.44
GTF3C1-206ENST00000566779 ATP6V1G1O75348 118 aa6.07□□□□□ -1.44
GTF3C1-206ENST00000566779 TRGC2P03986 189 aa6.07□□□□□ -1.44
GTF3C1-206ENST00000566779 KRTAP1-4P0C5Y4 121 aa6.07□□□□□ -1.44
GTF3C1-206ENST00000566779 MEIG1Q5JSS6 88 aa6.07□□□□□ -1.44
GTF3C1-206ENST00000566779 PRLHP81277 87 aa6.06□□□□□ -1.44
GTF3C1-206ENST00000566779 FAM19A1Q7Z5A9 133 aa6.06□□□□□ -1.44
GTF3C1-206ENST00000566779 TNXBP22105 4242 aa6.05□□□□□ -1.44
GTF3C1-206ENST00000566779 TMEM223A0PJW6 202 aa6.05□□□□□ -1.44
GTF3C1-206ENST00000566779 TMEM238C9JI98 176 aa6.05□□□□□ -1.44
GTF3C1-206ENST00000566779 SERF1AO75920 110 aa6.05□□□□□ -1.44
GTF3C1-206ENST00000566779 FABP4P15090 132 aa6.05□□□□□ -1.44
GTF3C1-206ENST00000566779 RPL13AP40429 203 aaKnown RBP6.05□□□□□ -1.44
GTF3C1-206ENST00000566779 KRTAP4-12Q9BQ66 201 aa6.05□□□□□ -1.44
GTF3C1-206ENST00000566779 IGLV5-37A0A075B6J1 123 aa6.04□□□□□ -1.44
GTF3C1-206ENST00000566779 TRAV12-1A0A0B4J245 112 aa6.04□□□□□ -1.44
GTF3C1-206ENST00000566779 LEPROTL1O95214 131 aa6.04□□□□□ -1.44
GTF3C1-206ENST00000566779 TSPAN13O95857 204 aa6.04□□□□□ -1.44
GTF3C1-206ENST00000566779 VPREB1P12018 145 aa6.04□□□□□ -1.44
GTF3C1-206ENST00000566779 RPL24P83731 157 aaKnown RBP6.04□□□□□ -1.44
GTF3C1-206ENST00000566779 PMCHL2Q9BQD1 86 aa6.04□□□□□ -1.44
GTF3C1-206ENST00000566779 ANAPC11Q9NYG5 84 aa6.04□□□□□ -1.44
GTF3C1-206ENST00000566779 NCR3O14931 201 aa6.03□□□□□ -1.44
GTF3C1-206ENST00000566779 SMIM13P0DJ93 91 aa6.03□□□□□ -1.44
GTF3C1-206ENST00000566779 COX17Q14061 63 aa6.03□□□□□ -1.44
GTF3C1-206ENST00000566779 SFTA2Q6UW10 78 aa6.03□□□□□ -1.44
GTF3C1-206ENST00000566779 Q8NDZ9 215 aa6.03□□□□□ -1.44
GTF3C1-206ENST00000566779 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
GTF3C1-206ENST00000566779 PRR4Q16378 134 aa6.02□□□□□ -1.45
GTF3C1-206ENST00000566779 TMEM126AQ9H061 195 aa6.02□□□□□ -1.45
GTF3C1-206ENST00000566779 A0A087X002 238 aa6.01□□□□□ -1.45
GTF3C1-206ENST00000566779 CRYGAP11844 174 aa6.01□□□□□ -1.45
GTF3C1-206ENST00000566779 BOD1L2Q8IYS8 172 aa6.01□□□□□ -1.45
GTF3C1-206ENST00000566779 TYMSOSQ8TAI1 123 aa6.01□□□□□ -1.45
GTF3C1-206ENST00000566779 HIGD2AQ9BW72 106 aa6.01□□□□□ -1.45
GTF3C1-206ENST00000566779 NDUFA12Q9UI09 145 aa6.01□□□□□ -1.45
GTF3C1-206ENST00000566779 MIR7-3HGQ8N6C7 128 aa6□□□□□ -1.45
GTF3C1-206ENST00000566779 DAND5Q8N907 189 aa6□□□□□ -1.45
GTF3C1-206ENST00000566779 HSPB8Q9UJY1 196 aa6□□□□□ -1.45
GTF3C1-206ENST00000566779 LRP2P98164 4655 aa5.99□□□□□ -1.45
GTF3C1-206ENST00000566779 MYMXA0A1B0GTQ4 84 aa5.99□□□□□ -1.45
GTF3C1-206ENST00000566779 TSPEAR-AS2P59090 65 aa5.99□□□□□ -1.45
GTF3C1-206ENST00000566779 HERVK_113P61574 105 aa5.99□□□□□ -1.45
GTF3C1-206ENST00000566779 COLCA2A8K830 154 aa5.98□□□□□ -1.45
GTF3C1-206ENST00000566779 M0R378 163 aa5.98□□□□□ -1.45
GTF3C1-206ENST00000566779 DPM2O94777 84 aa5.98□□□□□ -1.45
GTF3C1-206ENST00000566779 LGALS3P17931 250 aaKnown RBP5.98□□□□□ -1.45
GTF3C1-206ENST00000566779 PLNP26678 52 aa5.98□□□□□ -1.45
GTF3C1-206ENST00000566779 HERV-K104P63124 156 aa5.98□□□□□ -1.45
GTF3C1-206ENST00000566779 KRTAP13-1Q8IUC0 172 aa5.98□□□□□ -1.45
GTF3C1-206ENST00000566779 MAP1LC3CQ9BXW4 147 aa5.98□□□□□ -1.45
GTF3C1-206ENST00000566779 LEPROTO15243 131 aa5.97□□□□□ -1.45
GTF3C1-206ENST00000566779 PLEKHB2Q96CS7 222 aa5.97□□□□□ -1.45
GTF3C1-206ENST00000566779 IGKV2D-26A0A0A0MRZ7 120 aa5.96□□□□□ -1.46
GTF3C1-206ENST00000566779 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.46
GTF3C1-206ENST00000566779 KRTAP9-7A8MTY7 169 aa5.96□□□□□ -1.46
GTF3C1-206ENST00000566779 J3QQQ9 107 aa5.96□□□□□ -1.46
GTF3C1-206ENST00000566779 IGKCP01834 107 aa5.96□□□□□ -1.46
GTF3C1-206ENST00000566779 NPC2P61916 151 aa5.96□□□□□ -1.46
GTF3C1-206ENST00000566779 MIEN1Q9BRT3 115 aa5.96□□□□□ -1.46
GTF3C1-206ENST00000566779 ETDCA0A1B0GVM5 59 aa5.95□□□□□ -1.46
GTF3C1-206ENST00000566779 KRTAP13-2Q52LG2 175 aa5.95□□□□□ -1.46
GTF3C1-206ENST00000566779 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
GTF3C1-206ENST00000566779 TRBV10-3A0A0K0K1G6 114 aa5.94□□□□□ -1.46
GTF3C1-206ENST00000566779 LINC00587B1AMM8 73 aa5.94□□□□□ -1.46
GTF3C1-206ENST00000566779 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
GTF3C1-206ENST00000566779 LINC00304Q8N9R0 145 aa5.94□□□□□ -1.46
GTF3C1-206ENST00000566779 S100A12P80511 92 aa5.93□□□□□ -1.46
GTF3C1-206ENST00000566779 FAM229BQ4G0N7 80 aa5.93□□□□□ -1.46
GTF3C1-206ENST00000566779 PPDPFQ9H3Y8 114 aa5.93□□□□□ -1.46
GTF3C1-206ENST00000566779 HIST1H2BKO60814 126 aa5.92□□□□□ -1.46
GTF3C1-206ENST00000566779 HIST1H2BJP06899 126 aa5.92□□□□□ -1.46
GTF3C1-206ENST00000566779 HIST1H2BOP23527 126 aa5.92□□□□□ -1.46
GTF3C1-206ENST00000566779 HIST1H2BBP33778 126 aa5.92□□□□□ -1.46
GTF3C1-206ENST00000566779 HIST1H2BDP58876 126 aa5.92□□□□□ -1.46
GTF3C1-206ENST00000566779 HIST1H2BCP62807 126 aa5.92□□□□□ -1.46
GTF3C1-206ENST00000566779 HIST2H2BEQ16778 126 aa5.92□□□□□ -1.46
GTF3C1-206ENST00000566779 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.92□□□□□ -1.46
GTF3C1-206ENST00000566779 C3orf22Q8N5N4 141 aa5.92□□□□□ -1.46
GTF3C1-206ENST00000566779 HIST1H2BHQ93079 126 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms