RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 PFN2P35080 140 aa7.03□□□□□ -1.28
UBR1-206ENST00000566493 SEC11CQ9BY50 192 aa7.03□□□□□ -1.28
UBR1-206ENST00000566493 IGKV2-28A0A075B6P5 120 aa7.02□□□□□ -1.29
UBR1-206ENST00000566493 IGKV2D-28P01615 120 aa7.02□□□□□ -1.29
UBR1-206ENST00000566493 A0A0U1RQV1 116 aa7.01□□□□□ -1.29
UBR1-206ENST00000566493 IGLC3P0DOY3 106 aa7.01□□□□□ -1.29
UBR1-206ENST00000566493 RPL24P83731 157 aaKnown RBP7.01□□□□□ -1.29
UBR1-206ENST00000566493 FAM229BQ4G0N7 80 aa7.01□□□□□ -1.29
UBR1-206ENST00000566493 ANAPC11Q9NYG5 84 aa7.01□□□□□ -1.29
UBR1-206ENST00000566493 IGKV2D-26A0A0A0MRZ7 120 aa7□□□□□ -1.29
UBR1-206ENST00000566493 SCO1O75880 301 aa7□□□□□ -1.29
UBR1-206ENST00000566493 KRTAP13-1Q8IUC0 172 aa7□□□□□ -1.29
UBR1-206ENST00000566493 ERG28Q9UKR5 140 aa7□□□□□ -1.29
UBR1-206ENST00000566493 IGLV5-39A0A0G2JS06 123 aa6.99□□□□□ -1.29
UBR1-206ENST00000566493 LOC105371267A0A1B0GV96 52 aa6.99□□□□□ -1.29
UBR1-206ENST00000566493 COX17Q14061 63 aa6.99□□□□□ -1.29
UBR1-206ENST00000566493 FAM19A1Q7Z5A9 133 aa6.99□□□□□ -1.29
UBR1-206ENST00000566493 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
UBR1-206ENST00000566493 SND1-IT1Q9HBX3 110 aa6.99□□□□□ -1.29
UBR1-206ENST00000566493 RPS10P5Q9NQ39 176 aa6.99□□□□□ -1.29
UBR1-206ENST00000566493 LINC00614P0C842 121 aa6.98□□□□□ -1.29
UBR1-206ENST00000566493 ZNF22P17026 224 aaPredicted RBP6.98□□□□□ -1.29
UBR1-206ENST00000566493 KRTAP13-2Q52LG2 175 aa6.98□□□□□ -1.29
UBR1-206ENST00000566493 SFTA2Q6UW10 78 aa6.98□□□□□ -1.29
UBR1-206ENST00000566493 LINC00304Q8N9R0 145 aa6.98□□□□□ -1.29
UBR1-206ENST00000566493 HBDP02042 147 aa6.97□□□□□ -1.29
UBR1-206ENST00000566493 VPREB1P12018 145 aa6.97□□□□□ -1.29
UBR1-206ENST00000566493 PRLHP81277 87 aa6.97□□□□□ -1.29
UBR1-206ENST00000566493 RHEBQ15382 184 aa6.97□□□□□ -1.29
UBR1-206ENST00000566493 COMMD7Q86VX2 200 aa6.97□□□□□ -1.29
UBR1-206ENST00000566493 ZNF625Q96I27 306 aaPredicted RBP6.97□□□□□ -1.29
UBR1-206ENST00000566493 TMEM126AQ9H061 195 aa6.97□□□□□ -1.29
UBR1-206ENST00000566493 TRAPPC1Q9Y5R8 145 aa6.97□□□□□ -1.29
UBR1-206ENST00000566493 TMEM238C9JI98 176 aa6.96□□□□□ -1.3
UBR1-206ENST00000566493 TMEM170BQ5T4T1 132 aa6.96□□□□□ -1.3
UBR1-206ENST00000566493 BAGE3Q86Y29 109 aa6.96□□□□□ -1.3
UBR1-206ENST00000566493 A0A096LNJ9 63 aa6.95□□□□□ -1.3
UBR1-206ENST00000566493 CBLN2Q8IUK8 224 aa6.95□□□□□ -1.3
UBR1-206ENST00000566493 C18orf32Q8TCD1 76 aa6.95□□□□□ -1.3
UBR1-206ENST00000566493 RETNLBQ9BQ08 111 aa6.95□□□□□ -1.3
UBR1-206ENST00000566493 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
UBR1-206ENST00000566493 M0R378 163 aa6.94□□□□□ -1.3
UBR1-206ENST00000566493 PMCHL1Q16048 86 aa6.94□□□□□ -1.3
UBR1-206ENST00000566493 C10orf91Q5T1B1 145 aa6.94□□□□□ -1.3
UBR1-206ENST00000566493 URB1-AS1Q96HZ7 61 aa6.94□□□□□ -1.3
UBR1-206ENST00000566493 MUC2Q02817 5179 aa6.94□□□□□ -1.3
UBR1-206ENST00000566493 LINC00158P58513 81 aa6.93□□□□□ -1.3
UBR1-206ENST00000566493 CTAG1AP78358 180 aa6.93□□□□□ -1.3
UBR1-206ENST00000566493 CHTOPQ9Y3Y2 248 aaKnown RBP6.93□□□□□ -1.3
UBR1-206ENST00000566493 PLEKHB2Q96CS7 222 aa6.92□□□□□ -1.3
UBR1-206ENST00000566493 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
UBR1-206ENST00000566493 IGLV7-46A0A075B6I9 117 aa6.91□□□□□ -1.3
UBR1-206ENST00000566493 A0A0U1RRA0 63 aa6.9□□□□□ -1.3
UBR1-206ENST00000566493 Q8NDZ9 215 aa6.9□□□□□ -1.3
UBR1-206ENST00000566493 TPRXLQ17RH7 258 aa6.89□□□□□ -1.31
UBR1-206ENST00000566493 SPAG11AQ6PDA7 123 aa6.89□□□□□ -1.31
UBR1-206ENST00000566493 C3orf22Q8N5N4 141 aa6.89□□□□□ -1.31
UBR1-206ENST00000566493 ZNF706Q9Y5V0 76 aaPredicted RBP6.89□□□□□ -1.31
UBR1-206ENST00000566493 TMEM223A0PJW6 202 aa6.88□□□□□ -1.31
UBR1-206ENST00000566493 MEIG1Q5JSS6 88 aa6.88□□□□□ -1.31
UBR1-206ENST00000566493 TRAV12-1A0A0B4J245 112 aa6.87□□□□□ -1.31
UBR1-206ENST00000566493 PRYO14603 147 aa6.87□□□□□ -1.31
UBR1-206ENST00000566493 SNAPINO95295 136 aa6.87□□□□□ -1.31
UBR1-206ENST00000566493 APOC3P02656 99 aa6.87□□□□□ -1.31
UBR1-206ENST00000566493 SMIM13P0DJ93 91 aa6.87□□□□□ -1.31
UBR1-206ENST00000566493 BOD1L2Q8IYS8 172 aa6.87□□□□□ -1.31
UBR1-206ENST00000566493 IFI27L1Q96BM0 104 aa6.87□□□□□ -1.31
UBR1-206ENST00000566493 CHCHD1Q96BP2 118 aaKnown RBP6.87□□□□□ -1.31
UBR1-206ENST00000566493 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
UBR1-206ENST00000566493 LINC00587B1AMM8 73 aa6.86□□□□□ -1.31
UBR1-206ENST00000566493 PPDPFQ9H3Y8 114 aa6.86□□□□□ -1.31
UBR1-206ENST00000566493 NCR3O14931 201 aa6.85□□□□□ -1.31
UBR1-206ENST00000566493 HERV-K104P63124 156 aa6.85□□□□□ -1.31
UBR1-206ENST00000566493 S100A12P80511 92 aa6.85□□□□□ -1.31
UBR1-206ENST00000566493 SVBPQ8N300 66 aa6.85□□□□□ -1.31
UBR1-206ENST00000566493 MIR7-3HGQ8N6C7 128 aa6.85□□□□□ -1.31
UBR1-206ENST00000566493 ETDCA0A1B0GVM5 59 aa6.84□□□□□ -1.31
UBR1-206ENST00000566493 LINC00337Q8N6G1 96 aa6.84□□□□□ -1.31
UBR1-206ENST00000566493 MAP1LC3CQ9BXW4 147 aa6.84□□□□□ -1.31
UBR1-206ENST00000566493 MYMXA0A1B0GTQ4 84 aa6.83□□□□□ -1.32
UBR1-206ENST00000566493 SMCR5Q8TEV8 140 aa6.83□□□□□ -1.32
UBR1-206ENST00000566493 KCNQ1DNQ9H478 68 aa6.83□□□□□ -1.32
UBR1-206ENST00000566493 MUC17Q685J3 4493 aa6.83□□□□□ -1.32
UBR1-206ENST00000566493 HSBP1O75506 76 aa6.82□□□□□ -1.32
UBR1-206ENST00000566493 FP248Q71RG6 208 aaPredicted RBP6.82□□□□□ -1.32
UBR1-206ENST00000566493 Q8NBF4 154 aa6.82□□□□□ -1.32
UBR1-206ENST00000566493 NDUFA12Q9UI09 145 aa6.82□□□□□ -1.32
UBR1-206ENST00000566493 FAT4Q6V0I7 4981 aa6.82□□□□□ -1.32
UBR1-206ENST00000566493 SPRR1AP35321 89 aa6.81□□□□□ -1.32
UBR1-206ENST00000566493 DAND5Q8N907 189 aa6.81□□□□□ -1.32
UBR1-206ENST00000566493 KRTAP4-2Q9BYR5 136 aa6.81□□□□□ -1.32
UBR1-206ENST00000566493 TRBV10-3A0A0K0K1G6 114 aa6.8□□□□□ -1.32
UBR1-206ENST00000566493 H0Y8G0 127 aa6.8□□□□□ -1.32
UBR1-206ENST00000566493 SPINK1P00995 79 aa6.8□□□□□ -1.32
UBR1-206ENST00000566493 FAM19A2Q8N3H0 131 aa6.8□□□□□ -1.32
UBR1-206ENST00000566493 KRTAP4-16G5E9R7 235 aaPredicted RBP6.78□□□□□ -1.32
UBR1-206ENST00000566493 GAGE2AQ6NT46 116 aa6.78□□□□□ -1.32
UBR1-206ENST00000566493 YPEL4Q96NS1 127 aa6.78□□□□□ -1.32
UBR1-206ENST00000566493 B5MCH6 92 aa6.77□□□□□ -1.33
UBR1-206ENST00000566493 LEPROTO15243 131 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms