RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 KRTAP4-5Q9BYR2 181 aa12.43□□□□□ -0.42
CSPG4P13-201ENST00000565545 A4D1N5 150 aa12.42□□□□□ -0.42
CSPG4P13-201ENST00000565545 TLX1NBP0CAT3 122 aa12.42□□□□□ -0.42
CSPG4P13-201ENST00000565545 NPC2P61916 151 aa12.42□□□□□ -0.42
CSPG4P13-201ENST00000565545 SOSTDC1Q6X4U4 206 aa12.42□□□□□ -0.42
CSPG4P13-201ENST00000565545 ABCA13Q86UQ4 5058 aa12.41□□□□□ -0.42
CSPG4P13-201ENST00000565545 A0A1B0GWB2 263 aa12.41□□□□□ -0.42
CSPG4P13-201ENST00000565545 NDUFC2-KCTD14E9PQ53 114 aa12.41□□□□□ -0.42
CSPG4P13-201ENST00000565545 NHP2Q9NX24 153 aaKnown RBP12.41□□□□□ -0.42
CSPG4P13-201ENST00000565545 SND1-IT1Q9HBX3 110 aa12.4□□□□□ -0.42
CSPG4P13-201ENST00000565545 A0A087WTM6 91 aa12.39□□□□□ -0.43
CSPG4P13-201ENST00000565545 A0A0B4J2C4 111 aa12.38□□□□□ -0.43
CSPG4P13-201ENST00000565545 EIF4EBP3O60516 100 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P13-201ENST00000565545 Q8N814 137 aa12.38□□□□□ -0.43
CSPG4P13-201ENST00000565545 PKIGQ9Y2B9 76 aa12.38□□□□□ -0.43
CSPG4P13-201ENST00000565545 CFC1BP0CG36 223 aa12.37□□□□□ -0.43
CSPG4P13-201ENST00000565545 CFC1P0CG37 223 aa12.37□□□□□ -0.43
CSPG4P13-201ENST00000565545 PKD1P98161 4303 aa12.37□□□□□ -0.43
CSPG4P13-201ENST00000565545 C16orf90A8MZG2 172 aa12.36□□□□□ -0.43
CSPG4P13-201ENST00000565545 NDUFC2O95298 119 aa12.36□□□□□ -0.43
CSPG4P13-201ENST00000565545 LOC107984640A0A0U1RRK4 108 aa12.35□□□□□ -0.43
CSPG4P13-201ENST00000565545 RAB37Q96AX2 223 aa12.35□□□□□ -0.43
CSPG4P13-201ENST00000565545 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P13-201ENST00000565545 Q6ZRP5 223 aa12.33□□□□□ -0.44
CSPG4P13-201ENST00000565545 PRO1854Q9UHT4 67 aa12.33□□□□□ -0.44
CSPG4P13-201ENST00000565545 K7ERJ3 54 aa12.32□□□□□ -0.44
CSPG4P13-201ENST00000565545 RPL18AQ02543 176 aaKnown RBP12.32□□□□□ -0.44
CSPG4P13-201ENST00000565545 TNP2Q05952 138 aa12.32□□□□□ -0.44
CSPG4P13-201ENST00000565545 C9orf163Q8N9P6 203 aa12.32□□□□□ -0.44
CSPG4P13-201ENST00000565545 TAX1BP3O14907 124 aa12.31□□□□□ -0.44
CSPG4P13-201ENST00000565545 GAGE2EQ4V326 116 aa12.31□□□□□ -0.44
CSPG4P13-201ENST00000565545 GAGE2DQ9UEU5 116 aa12.31□□□□□ -0.44
CSPG4P13-201ENST00000565545 TRAV13-2A0A0B4J235 113 aa12.3□□□□□ -0.44
CSPG4P13-201ENST00000565545 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
CSPG4P13-201ENST00000565545 XAGE1AQ9HD64 81 aa12.3□□□□□ -0.44
CSPG4P13-201ENST00000565545 HSPG2P98160 4391 aa12.28□□□□□ -0.44
CSPG4P13-201ENST00000565545 PLA2G2DQ9UNK4 145 aa12.28□□□□□ -0.44
CSPG4P13-201ENST00000565545 IGKV2-28A0A075B6P5 120 aa12.27□□□□□ -0.45
CSPG4P13-201ENST00000565545 C9orf118A6NHY6 69 aa12.27□□□□□ -0.45
CSPG4P13-201ENST00000565545 IGKV2D-28P01615 120 aa12.27□□□□□ -0.45
CSPG4P13-201ENST00000565545 GAGE2BQ13066 116 aa12.27□□□□□ -0.45
CSPG4P13-201ENST00000565545 TRBV10-2A0A0K0K1G8 114 aa12.26□□□□□ -0.45
CSPG4P13-201ENST00000565545 C9orf129Q5T035 196 aaKnown RBP12.26□□□□□ -0.45
CSPG4P13-201ENST00000565545 PGPEP1Q9NXJ5 209 aa12.26□□□□□ -0.45
CSPG4P13-201ENST00000565545 RPL13AP40429 203 aaKnown RBP12.24□□□□□ -0.45
CSPG4P13-201ENST00000565545 VPREB1P12018 145 aa12.23□□□□□ -0.45
CSPG4P13-201ENST00000565545 LINC00337Q8N6G1 96 aa12.23□□□□□ -0.45
CSPG4P13-201ENST00000565545 TSPAN13O95857 204 aa12.22□□□□□ -0.45
CSPG4P13-201ENST00000565545 SDIM1Q6ZPB5 146 aa12.22□□□□□ -0.45
CSPG4P13-201ENST00000565545 LINC00474Q9P2X8 69 aa12.22□□□□□ -0.45
CSPG4P13-201ENST00000565545 A0A096LNI7 61 aa12.21□□□□□ -0.45
CSPG4P13-201ENST00000565545 IGLV5-52A0A0A0MRZ9 124 aa12.21□□□□□ -0.45
CSPG4P13-201ENST00000565545 H3BUT2 72 aa12.21□□□□□ -0.45
CSPG4P13-201ENST00000565545 Q1RN00 199 aa12.21□□□□□ -0.45
CSPG4P13-201ENST00000565545 Q8N1X5 172 aa12.21□□□□□ -0.45
CSPG4P13-201ENST00000565545 Q8NDZ9 215 aa12.21□□□□□ -0.45
CSPG4P13-201ENST00000565545 TMEM126AQ9H061 195 aa12.21□□□□□ -0.45
CSPG4P13-201ENST00000565545 IGLV5-37A0A075B6J1 123 aa12.2□□□□□ -0.46
CSPG4P13-201ENST00000565545 M0R378 163 aa12.2□□□□□ -0.46
CSPG4P13-201ENST00000565545 PRR3P79522 188 aaKnown RBP12.2□□□□□ -0.46
CSPG4P13-201ENST00000565545 OR13C6PQ8NH95 151 aa12.2□□□□□ -0.46
CSPG4P13-201ENST00000565545 H7C2G1 150 aa12.19□□□□□ -0.46
CSPG4P13-201ENST00000565545 NCR3O14931 201 aa12.19□□□□□ -0.46
CSPG4P13-201ENST00000565545 S100A7L2Q5SY68 101 aa12.18□□□□□ -0.46
CSPG4P13-201ENST00000565545 NKAPP1Q8N9T2 125 aa12.18□□□□□ -0.46
CSPG4P13-201ENST00000565545 LYRM7Q5U5X0 104 aa12.17□□□□□ -0.46
CSPG4P13-201ENST00000565545 CBY1Q9Y3M2 126 aa12.17□□□□□ -0.46
CSPG4P13-201ENST00000565545 LRP1BQ9NZR2 4599 aa12.17□□□□□ -0.46
CSPG4P13-201ENST00000565545 IGKV2-24A0A0C4DH68 120 aa12.16□□□□□ -0.46
CSPG4P13-201ENST00000565545 A0A1W2PPM0 123 aa12.16□□□□□ -0.46
CSPG4P13-201ENST00000565545 IGLV6-57P01721 117 aa12.15□□□□□ -0.46
CSPG4P13-201ENST00000565545 FABP2P12104 132 aa12.15□□□□□ -0.46
CSPG4P13-201ENST00000565545 RPL28P46779 137 aaKnown RBP12.15□□□□□ -0.46
CSPG4P13-201ENST00000565545 PSMB2P49721 201 aa12.15□□□□□ -0.46
CSPG4P13-201ENST00000565545 SERTAD4-AS1Q5TG53 156 aa12.15□□□□□ -0.46
CSPG4P13-201ENST00000565545 A0A1B0GV90 55 aa12.14□□□□□ -0.47
CSPG4P13-201ENST00000565545 COX6CP09669 75 aa12.14□□□□□ -0.47
CSPG4P13-201ENST00000565545 NAA38Q9BRA0 125 aaKnown RBP12.14□□□□□ -0.47
CSPG4P13-201ENST00000565545 LINC01620Q4KN68 170 aa12.13□□□□□ -0.47
CSPG4P13-201ENST00000565545 FAM168BA1KXE4 195 aa12.12□□□□□ -0.47
CSPG4P13-201ENST00000565545 SMIM11BQ8TCY0 68 aa12.12□□□□□ -0.47
CSPG4P13-201ENST00000565545 C22orf24Q9Y442 160 aa12.12□□□□□ -0.47
CSPG4P13-201ENST00000565545 TRBV10-3A0A0K0K1G6 114 aa12.11□□□□□ -0.47
CSPG4P13-201ENST00000565545 TRIAP1O43715 76 aa12.11□□□□□ -0.47
CSPG4P13-201ENST00000565545 SCGB1C2P0DMR2 95 aa12.11□□□□□ -0.47
CSPG4P13-201ENST00000565545 VAMP3Q15836 100 aa12.11□□□□□ -0.47
CSPG4P13-201ENST00000565545 CHTF8P0CG12 524 aa12.1□□□□□ -0.47
CSPG4P13-201ENST00000565545 KRTAP10-2P60368 255 aa12.1□□□□□ -0.47
CSPG4P13-201ENST00000565545 FAM19A5Q7Z5A7 132 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P13-201ENST00000565545 KRTAP7-1Q8IUC3 87 aa12.1□□□□□ -0.47
CSPG4P13-201ENST00000565545 C7orf33Q8WU49 177 aa12.1□□□□□ -0.47
CSPG4P13-201ENST00000565545 MRPL55Q7Z7F7 128 aaKnown RBP12.09□□□□□ -0.47
CSPG4P13-201ENST00000565545 SPACA4Q8TDM5 124 aa12.09□□□□□ -0.47
CSPG4P13-201ENST00000565545 A0A1W2PNN7 141 aa12.08□□□□□ -0.48
CSPG4P13-201ENST00000565545 FUSP35637 526 aaKnown RBP eCLIP12.08□□□□□ -0.48
CSPG4P13-201ENST00000565545 APOBP04114 4563 aaKnown RBP12.08□□□□□ -0.48
CSPG4P13-201ENST00000565545 TRBV20-1A0A075B6N2 111 aa12.07□□□□□ -0.48
CSPG4P13-201ENST00000565545 TRAV23DV6A0A075B6W5 121 aa12.07□□□□□ -0.48
CSPG4P13-201ENST00000565545 EPM2AB3EWF7 344 aa12.07□□□□□ -0.48
CSPG4P13-201ENST00000565545 DPH3Q96FX2 82 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms