RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, human

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN9-204	ENST00000564970	CNBP	P62633	177 aa	Known RBP	4.3	□□□□□ -1.72
PTPN9-204	ENST00000564970	MDFI	Q99750	246 aa		4.3	□□□□□ -1.72
PTPN9-204	ENST00000564970	ACACA	Q13085	2346 aa		4.29	□□□□□ -1.72
PTPN9-204	ENST00000564970	CAD	P27708	2225 aa		4.29	□□□□□ -1.72
PTPN9-204	ENST00000564970	SDK2	Q58EX2	2172 aa		4.29	□□□□□ -1.72
PTPN9-204	ENST00000564970	PRR3	P79522	188 aa	Known RBP	4.29	□□□□□ -1.72
PTPN9-204	ENST00000564970	COX6A2	Q02221	97 aa		4.29	□□□□□ -1.72
PTPN9-204	ENST00000564970	HIGD2B	Q4VC39	106 aa		4.29	□□□□□ -1.72
PTPN9-204	ENST00000564970	RETNLB	Q9BQ08	111 aa		4.29	□□□□□ -1.72
PTPN9-204	ENST00000564970	PLAC8	Q9NZF1	115 aa		4.29	□□□□□ -1.72
PTPN9-204	ENST00000564970	COL6A6	A6NMZ7	2263 aa		4.29	□□□□□ -1.72
PTPN9-204	ENST00000564970	MGA	Q8IWI9	3026 aa		4.29	□□□□□ -1.72
PTPN9-204	ENST00000564970	MUC4	Q99102	2169 aa		4.29	□□□□□ -1.72
PTPN9-204	ENST00000564970	MTOR	P42345	2549 aa		4.28	□□□□□ -1.72
PTPN9-204	ENST00000564970	CENPE	Q02224	2701 aa		4.28	□□□□□ -1.72
PTPN9-204	ENST00000564970	ODF3B	A8MYP8	253 aa		4.28	□□□□□ -1.72
PTPN9-204	ENST00000564970	IGHV3-23	P01764	117 aa		4.28	□□□□□ -1.72
PTPN9-204	ENST00000564970	IGHV4-59	P01825	116 aa		4.28	□□□□□ -1.72
PTPN9-204	ENST00000564970	LOR	P23490	312 aa	Predicted RBP	4.28	□□□□□ -1.72
PTPN9-204	ENST00000564970		Q8IZM0	81 aa		4.28	□□□□□ -1.72
PTPN9-204	ENST00000564970	USMG5	Q96IX5	58 aa		4.28	□□□□□ -1.72
PTPN9-204	ENST00000564970	WFDC10A	Q9H1F0	79 aa		4.28	□□□□□ -1.72
PTPN9-204	ENST00000564970	XAGE1A	Q9HD64	81 aa		4.28	□□□□□ -1.72
PTPN9-204	ENST00000564970	NBEAL1	Q6ZS30	2694 aa		4.28	□□□□□ -1.73
PTPN9-204	ENST00000564970	FBN1	P35555	2871 aa	Known RBP	4.27	□□□□□ -1.73
PTPN9-204	ENST00000564970		A0A096LNT2	108 aa		4.27	□□□□□ -1.73
PTPN9-204	ENST00000564970	IGHV6-1	A0A0B4J1U7	121 aa		4.27	□□□□□ -1.73
PTPN9-204	ENST00000564970	C18orf65	Q6ZTR6	163 aa		4.27	□□□□□ -1.73
PTPN9-204	ENST00000564970	CELSR1	Q9NYQ6	3014 aa		4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	IGLV4-60	A0A075B6I1	120 aa		4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	IGHV3-66	A0A0C4DH42	116 aa		4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	LRCOL1	A6NCL2	159 aa		4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	NANOS2	P60321	138 aa	Known RBP	4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	C6orf99	Q4VX62	202 aa		4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	RNASE13	Q5GAN3	156 aa	Known RBP	4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	PLA2G2C	Q5R387	149 aa		4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	SPINK14	Q6IE38	97 aa		4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	C22orf34	Q6ZV56	151 aa		4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	KRTAP17-1	Q9BYP8	105 aa		4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	F5	P12259	2224 aa		4.26	□□□□□ -1.73
PTPN9-204	ENST00000564970	ADGRG4	Q8IZF6	3080 aa		4.25	□□□□□ -1.73
PTPN9-204	ENST00000564970	HIVEP1	P15822	2718 aa		4.25	□□□□□ -1.73
PTPN9-204	ENST00000564970	IGHV4-30-4	P0DP06	118 aa		4.25	□□□□□ -1.73
PTPN9-204	ENST00000564970	PRB4	P10163	310 aa	Predicted RBP	4.25	□□□□□ -1.73
PTPN9-204	ENST00000564970	ZFP36	P26651	326 aa	Known RBP	4.25	□□□□□ -1.73
PTPN9-204	ENST00000564970		S4R3C0	116 aa		4.25	□□□□□ -1.73
PTPN9-204	ENST00000564970	ABCA1	O95477	2261 aa		4.24	□□□□□ -1.73
PTPN9-204	ENST00000564970	CELSR2	Q9HCU4	2923 aa		4.24	□□□□□ -1.73
PTPN9-204	ENST00000564970	F8	P00451	2351 aa		4.24	□□□□□ -1.73
PTPN9-204	ENST00000564970	IGHV4-28	A0A0C4DH34	117 aa		4.24	□□□□□ -1.73
PTPN9-204	ENST00000564970	IGHV4-61	A0A0C4DH41	118 aa		4.24	□□□□□ -1.73
PTPN9-204	ENST00000564970	SPAG11B	Q08648	103 aa		4.24	□□□□□ -1.73
PTPN9-204	ENST00000564970	SMIM29	Q86T20	159 aa		4.24	□□□□□ -1.73
PTPN9-204	ENST00000564970	CNEP1R1	Q8N9A8	125 aa		4.24	□□□□□ -1.73
PTPN9-204	ENST00000564970	URB1	O60287	2271 aa	Known RBP	4.24	□□□□□ -1.73
PTPN9-204	ENST00000564970	ASCC3	Q8N3C0	2202 aa	Known RBP	4.23	□□□□□ -1.73
PTPN9-204	ENST00000564970		A8MTW9	85 aa		4.23	□□□□□ -1.73
PTPN9-204	ENST00000564970	IGHV3-11	P01762	117 aa		4.23	□□□□□ -1.73
PTPN9-204	ENST00000564970	RNASE1	P07998	156 aa	Known RBP	4.23	□□□□□ -1.73
PTPN9-204	ENST00000564970		Q6ZQY7	126 aa		4.23	□□□□□ -1.73
PTPN9-204	ENST00000564970	LINC01006	Q8NI28	216 aa		4.23	□□□□□ -1.73
PTPN9-204	ENST00000564970	FAM30A	Q9NZY2	134 aa		4.23	□□□□□ -1.73
PTPN9-204	ENST00000564970	NIPBL	Q6KC79	2804 aa	eCLIP	4.23	□□□□□ -1.73
PTPN9-204	ENST00000564970	MED13	Q9UHV7	2174 aa		4.23	□□□□□ -1.73
PTPN9-204	ENST00000564970	BOD1L1	Q8NFC6	3051 aa		4.22	□□□□□ -1.73
PTPN9-204	ENST00000564970	ATP6V0E1	O15342	81 aa		4.22	□□□□□ -1.73
PTPN9-204	ENST00000564970	IGLV6-57	P01721	117 aa		4.22	□□□□□ -1.73
PTPN9-204	ENST00000564970	LCE2C	Q5TA81	110 aa		4.22	□□□□□ -1.73
PTPN9-204	ENST00000564970		Q8N9W7	124 aa		4.22	□□□□□ -1.73
PTPN9-204	ENST00000564970	FDCSP	Q8NFU4	85 aa		4.22	□□□□□ -1.73
PTPN9-204	ENST00000564970	ARRDC1-AS1	Q9H2J1	176 aa		4.22	□□□□□ -1.73
PTPN9-204	ENST00000564970	ATR	Q13535	2644 aa		4.21	□□□□□ -1.74
PTPN9-204	ENST00000564970	IGLV7-46	A0A075B6I9	117 aa		4.21	□□□□□ -1.74
PTPN9-204	ENST00000564970		A8MU10	97 aa		4.21	□□□□□ -1.74
PTPN9-204	ENST00000564970	COX7A1	P24310	79 aa		4.21	□□□□□ -1.74
PTPN9-204	ENST00000564970	C10orf25	Q5T742	122 aa		4.21	□□□□□ -1.74
PTPN9-204	ENST00000564970	LCE1D	Q5T752	114 aa		4.21	□□□□□ -1.74
PTPN9-204	ENST00000564970	LYPD2	Q6UXB3	125 aa		4.21	□□□□□ -1.74
PTPN9-204	ENST00000564970	TOMM7	Q9P0U1	55 aa		4.21	□□□□□ -1.74
PTPN9-204	ENST00000564970	CACNA1E	Q15878	2313 aa		4.21	□□□□□ -1.74
PTPN9-204	ENST00000564970	PLCE1	Q9P212	2302 aa		4.21	□□□□□ -1.74
PTPN9-204	ENST00000564970		H0Y9P7	68 aa		4.2	□□□□□ -1.74
PTPN9-204	ENST00000564970	RTL8C	O15255	209 aa		4.2	□□□□□ -1.74
PTPN9-204	ENST00000564970	COA5	Q86WW8	74 aa		4.2	□□□□□ -1.74
PTPN9-204	ENST00000564970	DEFB124	Q8NES8	71 aa		4.2	□□□□□ -1.74
PTPN9-204	ENST00000564970	DEFB104A	Q8WTQ1	72 aa		4.2	□□□□□ -1.74
PTPN9-204	ENST00000564970	RHPN1-AS1	Q9BWJ2	59 aa		4.2	□□□□□ -1.74
PTPN9-204	ENST00000564970	AHCTF1	Q8WYP5	2266 aa		4.19	□□□□□ -1.74
PTPN9-204	ENST00000564970	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.19	□□□□□ -1.74
PTPN9-204	ENST00000564970	BSN	Q9UPA5	3926 aa		4.19	□□□□□ -1.74
PTPN9-204	ENST00000564970	IGLV5-48	A0A075B6I7	105 aa		4.19	□□□□□ -1.74
PTPN9-204	ENST00000564970		M0R2N4	97 aa		4.19	□□□□□ -1.74
PTPN9-204	ENST00000564970	KPRP	Q5T749	579 aa	Predicted RBP	4.19	□□□□□ -1.74
PTPN9-204	ENST00000564970		Q8NAQ8	132 aa		4.19	□□□□□ -1.74
PTPN9-204	ENST00000564970	HIVEP3	Q5T1R4	2406 aa		4.19	□□□□□ -1.74
PTPN9-204	ENST00000564970	AKAP9	Q99996	3911 aa		4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970	IGHV3OR16-13	A0A075B7E8	117 aa		4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970	IGHV3OR16-8	A0A075B7F1	116 aa		4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970	IGHV3-74	A0A0B4J1X5	117 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms