RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TRBV20-1A0A075B6N2 111 aa8.45□□□□□ -1.06
SPG7-209ENST00000564047 CKS1BP61024 79 aa8.45□□□□□ -1.06
SPG7-209ENST00000564047 HERV-K104P63124 156 aa8.45□□□□□ -1.06
SPG7-209ENST00000564047 CIRBPQ14011 172 aaKnown RBP8.45□□□□□ -1.06
SPG7-209ENST00000564047 LINC00336Q6ZUF6 198 aa8.45□□□□□ -1.06
SPG7-209ENST00000564047 CBY1Q9Y3M2 126 aa8.45□□□□□ -1.06
SPG7-209ENST00000564047 HSPG2P98160 4391 aa8.44□□□□□ -1.06
SPG7-209ENST00000564047 Q8N814 137 aa8.44□□□□□ -1.06
SPG7-209ENST00000564047 LINC00526Q96FQ7 95 aa8.44□□□□□ -1.06
SPG7-209ENST00000564047 ZNF625Q96I27 306 aaPredicted RBP8.44□□□□□ -1.06
SPG7-209ENST00000564047 CAMK2N2Q96S95 79 aa8.44□□□□□ -1.06
SPG7-209ENST00000564047 TNP2Q05952 138 aa8.43□□□□□ -1.06
SPG7-209ENST00000564047 C2orf82Q6UX34 121 aa8.43□□□□□ -1.06
SPG7-209ENST00000564047 PRO0461Q9UI25 63 aa8.43□□□□□ -1.06
SPG7-209ENST00000564047 ERG28Q9UKR5 140 aa8.43□□□□□ -1.06
SPG7-209ENST00000564047 EIF4EBP3O60516 100 aaPredicted RBP8.42□□□□□ -1.06
SPG7-209ENST00000564047 SYCNQ0VAF6 134 aa8.42□□□□□ -1.06
SPG7-209ENST00000564047 ADAMTSL4-AS1Q5T5F5 129 aa8.42□□□□□ -1.06
SPG7-209ENST00000564047 LOC107984156A0A0G2JMH3 177 aa8.41□□□□□ -1.06
SPG7-209ENST00000564047 H3BMG7 143 aa8.41□□□□□ -1.06
SPG7-209ENST00000564047 SLPIP03973 132 aa8.41□□□□□ -1.06
SPG7-209ENST00000564047 CNBPP62633 177 aaKnown RBP8.41□□□□□ -1.06
SPG7-209ENST00000564047 UNQ6190/PRO20217Q6UXQ8 127 aa8.41□□□□□ -1.06
SPG7-209ENST00000564047 ARL17AQ8IVW1 177 aa8.41□□□□□ -1.06
SPG7-209ENST00000564047 TRBV30A0A0K0K1B3 111 aa8.4□□□□□ -1.06
SPG7-209ENST00000564047 C10orf25Q5T742 122 aa8.4□□□□□ -1.06
SPG7-209ENST00000564047 Q6ZRU5 148 aa8.4□□□□□ -1.06
SPG7-209ENST00000564047 CARD19Q96LW7 228 aa8.4□□□□□ -1.06
SPG7-209ENST00000564047 KRTAP4-5Q9BYR2 181 aa8.4□□□□□ -1.06
SPG7-209ENST00000564047 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.39□□□□□ -1.07
SPG7-209ENST00000564047 A0A1B0GVY2 172 aa8.39□□□□□ -1.07
SPG7-209ENST00000564047 RNF151Q2KHN1 245 aa8.39□□□□□ -1.07
SPG7-209ENST00000564047 C6orf48Q9UBA6 75 aa8.39□□□□□ -1.07
SPG7-209ENST00000564047 M0QXV9 152 aa8.38□□□□□ -1.07
SPG7-209ENST00000564047 PSMB2P49721 201 aa8.38□□□□□ -1.07
SPG7-209ENST00000564047 LINC00308Q8TCZ7 52 aa8.38□□□□□ -1.07
SPG7-209ENST00000564047 J3QR89 54 aa8.37□□□□□ -1.07
SPG7-209ENST00000564047 TCL1BO95988 128 aa8.37□□□□□ -1.07
SPG7-209ENST00000564047 SCGB1C2P0DMR2 95 aa8.37□□□□□ -1.07
SPG7-209ENST00000564047 COX17Q14061 63 aa8.36□□□□□ -1.07
SPG7-209ENST00000564047 Q1RN00 199 aa8.36□□□□□ -1.07
SPG7-209ENST00000564047 MEIG1Q5JSS6 88 aa8.36□□□□□ -1.07
SPG7-209ENST00000564047 C9orf163Q8N9P6 203 aa8.36□□□□□ -1.07
SPG7-209ENST00000564047 LINC01600Q96MT4 127 aa8.36□□□□□ -1.07
SPG7-209ENST00000564047 C9orf116Q5BN46 136 aaPredicted RBP8.35□□□□□ -1.07
SPG7-209ENST00000564047 VPS25Q9BRG1 176 aa8.35□□□□□ -1.07
SPG7-209ENST00000564047 COX6CP09669 75 aa8.34□□□□□ -1.07
SPG7-209ENST00000564047 TLX1NBP0CAT3 122 aa8.34□□□□□ -1.07
SPG7-209ENST00000564047 PFN2P35080 140 aa8.34□□□□□ -1.07
SPG7-209ENST00000564047 ATXN8Q156A1 80 aa8.34□□□□□ -1.07
SPG7-209ENST00000564047 IGLV5-52A0A0A0MRZ9 124 aa8.33□□□□□ -1.08
SPG7-209ENST00000564047 NDUFC2-KCTD14E9PQ53 114 aa8.33□□□□□ -1.08
SPG7-209ENST00000564047 SMCPP49901 116 aaPredicted RBP8.33□□□□□ -1.08
SPG7-209ENST00000564047 LINC00158P58513 81 aa8.33□□□□□ -1.08
SPG7-209ENST00000564047 LCE2DQ5TA82 110 aaPredicted RBP8.33□□□□□ -1.08
SPG7-209ENST00000564047 PKIGQ9Y2B9 76 aa8.33□□□□□ -1.08
SPG7-209ENST00000564047 TRIAP1O43715 76 aa8.32□□□□□ -1.08
SPG7-209ENST00000564047 RPL13AP40429 203 aaKnown RBP8.32□□□□□ -1.08
SPG7-209ENST00000564047 ETDBQ3ZM63 59 aa8.32□□□□□ -1.08
SPG7-209ENST00000564047 LRP1BQ9NZR2 4599 aa8.31□□□□□ -1.08
SPG7-209ENST00000564047 A0A0U1RRA0 63 aa8.31□□□□□ -1.08
SPG7-209ENST00000564047 LOC107984640A0A0U1RRK4 108 aa8.31□□□□□ -1.08
SPG7-209ENST00000564047 H7C2G1 150 aa8.31□□□□□ -1.08
SPG7-209ENST00000564047 KRTAP10-2P60368 255 aa8.31□□□□□ -1.08
SPG7-209ENST00000564047 NPC2P61916 151 aa8.31□□□□□ -1.08
SPG7-209ENST00000564047 SOSTDC1Q6X4U4 206 aa8.31□□□□□ -1.08
SPG7-209ENST00000564047 TEN1Q86WV5 123 aa8.31□□□□□ -1.08
SPG7-209ENST00000564047 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
SPG7-209ENST00000564047 DAND5Q8N907 189 aa8.31□□□□□ -1.08
SPG7-209ENST00000564047 LINC01620Q4KN68 170 aa8.3□□□□□ -1.08
SPG7-209ENST00000564047 Q6ZRP5 223 aa8.3□□□□□ -1.08
SPG7-209ENST00000564047 FUSP35637 526 aaKnown RBP eCLIP8.29□□□□□ -1.08
SPG7-209ENST00000564047 SDIM1Q6ZPB5 146 aa8.29□□□□□ -1.08
SPG7-209ENST00000564047 PPDPFLQ8WWR9 84 aa8.29□□□□□ -1.08
SPG7-209ENST00000564047 DMBT1Q9UGM3 2413 aaPredicted RBP8.29□□□□□ -1.08
SPG7-209ENST00000564047 TRAV13-2A0A0B4J235 113 aa8.28□□□□□ -1.08
SPG7-209ENST00000564047 TRBV10-2A0A0K0K1G8 114 aa8.28□□□□□ -1.08
SPG7-209ENST00000564047 LST1O00453 97 aa8.28□□□□□ -1.08
SPG7-209ENST00000564047 SLC25A20O43772 301 aa8.28□□□□□ -1.08
SPG7-209ENST00000564047 RPL18AQ02543 176 aaKnown RBP8.28□□□□□ -1.08
SPG7-209ENST00000564047 MTURNQ8N3F0 131 aa8.28□□□□□ -1.08
SPG7-209ENST00000564047 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
SPG7-209ENST00000564047 APOBP04114 4563 aaKnown RBP8.28□□□□□ -1.08
SPG7-209ENST00000564047 C16orf90A8MZG2 172 aa8.27□□□□□ -1.09
SPG7-209ENST00000564047 C9JAW5 83 aa8.27□□□□□ -1.09
SPG7-209ENST00000564047 H3BT86 120 aa8.27□□□□□ -1.09
SPG7-209ENST00000564047 GAGE2BQ13066 116 aa8.27□□□□□ -1.09
SPG7-209ENST00000564047 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
SPG7-209ENST00000564047 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
SPG7-209ENST00000564047 A0A096LNI7 61 aa8.26□□□□□ -1.09
SPG7-209ENST00000564047 ANKRD29Q8N6D5 301 aa8.25□□□□□ -1.09
SPG7-209ENST00000564047 XAGE1AQ9HD64 81 aa8.25□□□□□ -1.09
SPG7-209ENST00000564047 LINC00474Q9P2X8 69 aa8.25□□□□□ -1.09
SPG7-209ENST00000564047 CDK2AP2O75956 126 aa8.24□□□□□ -1.09
SPG7-209ENST00000564047 C9orf129Q5T035 196 aaKnown RBP8.24□□□□□ -1.09
SPG7-209ENST00000564047 DNAH5Q8TE73 4624 aa8.24□□□□□ -1.09
SPG7-209ENST00000564047 IGKV2-24A0A0C4DH68 120 aa8.23□□□□□ -1.09
SPG7-209ENST00000564047 RPL28P46779 137 aaKnown RBP8.23□□□□□ -1.09
SPG7-209ENST00000564047 PLA2G2DQ9UNK4 145 aa8.22□□□□□ -1.09
SPG7-209ENST00000564047 NDUFC2O95298 119 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms