RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 IGKV3-7A0A075B6H7 116 aa2.18□□□□□ -2.06
GDE1-202ENST00000563645 TRGV2A0A075B6R0 118 aa2.18□□□□□ -2.06
GDE1-202ENST00000563645 H3BPC8 53 aa2.18□□□□□ -2.06
GDE1-202ENST00000563645 H3BQ85 93 aa2.18□□□□□ -2.06
GDE1-202ENST00000563645 PRB1P04280 392 aa2.18□□□□□ -2.06
GDE1-202ENST00000563645 CCL18P55774 89 aa2.18□□□□□ -2.06
GDE1-202ENST00000563645 RPL39P62891 51 aaKnown RBP2.18□□□□□ -2.06
GDE1-202ENST00000563645 RPL39LQ96EH5 51 aaKnown RBP2.18□□□□□ -2.06
GDE1-202ENST00000563645 SPAG17Q6Q759 2223 aa2.18□□□□□ -2.06
GDE1-202ENST00000563645 ALPK2Q86TB3 2170 aa2.17□□□□□ -2.06
GDE1-202ENST00000563645 IGKV2-28A0A075B6P5 120 aa2.17□□□□□ -2.06
GDE1-202ENST00000563645 TRGV4A0A0C4DH28 118 aa2.17□□□□□ -2.06
GDE1-202ENST00000563645 NUPR2A6NF83 97 aa2.17□□□□□ -2.06
GDE1-202ENST00000563645 IGKV2D-28P01615 120 aa2.17□□□□□ -2.06
GDE1-202ENST00000563645 DEFB112Q30KQ8 113 aa2.17□□□□□ -2.06
GDE1-202ENST00000563645 ST20-AS1Q8NBB2 130 aa2.17□□□□□ -2.06
GDE1-202ENST00000563645 UNC13CQ8NB66 2214 aa2.17□□□□□ -2.06
GDE1-202ENST00000563645 PRRC2BQ5JSZ5 2229 aaKnown RBP2.16□□□□□ -2.06
GDE1-202ENST00000563645 IGLV11-55A0A075B6I3 123 aa2.16□□□□□ -2.06
GDE1-202ENST00000563645 IGKV2D-24A0A075B6R9 120 aa2.16□□□□□ -2.06
GDE1-202ENST00000563645 IGHV3-64DA0A0J9YX35 117 aa2.16□□□□□ -2.06
GDE1-202ENST00000563645 TRBV6-4A0A1B0GX49 114 aa2.16□□□□□ -2.06
GDE1-202ENST00000563645 H3BRN7 92 aa2.16□□□□□ -2.06
GDE1-202ENST00000563645 MGPP08493 103 aa2.16□□□□□ -2.06
GDE1-202ENST00000563645 RNASE3P12724 160 aaKnown RBP2.16□□□□□ -2.06
GDE1-202ENST00000563645 ERHP84090 104 aaKnown RBP2.16□□□□□ -2.06
GDE1-202ENST00000563645 CAMK2N1Q7Z7J9 78 aa2.16□□□□□ -2.06
GDE1-202ENST00000563645 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
GDE1-202ENST00000563645 SPRR5A0A1B0GTR4 108 aa2.15□□□□□ -2.07
GDE1-202ENST00000563645 CCL3L1P16619 93 aa2.15□□□□□ -2.07
GDE1-202ENST00000563645 Q5W150 140 aa2.15□□□□□ -2.07
GDE1-202ENST00000563645 IGKV2-40A0A087WW87 121 aaPredicted RBP2.14□□□□□ -2.07
GDE1-202ENST00000563645 A0A096LNT2 108 aa2.14□□□□□ -2.07
GDE1-202ENST00000563645 IGKV3OR2-268A0A0C4DH90 116 aa2.14□□□□□ -2.07
GDE1-202ENST00000563645 UQCR11O14957 56 aa2.14□□□□□ -2.07
GDE1-202ENST00000563645 IGKV2D-40P01614 121 aaPredicted RBP2.14□□□□□ -2.07
GDE1-202ENST00000563645 STATHP02808 62 aa2.14□□□□□ -2.07
GDE1-202ENST00000563645 LEAP2Q969E1 77 aa2.14□□□□□ -2.07
GDE1-202ENST00000563645 MINOS1-NBL1R4GNA1 71 aa2.14□□□□□ -2.07
GDE1-202ENST00000563645 SDK1Q7Z5N4 2213 aa2.14□□□□□ -2.07
GDE1-202ENST00000563645 F5P12259 2224 aa2.13□□□□□ -2.07
GDE1-202ENST00000563645 CADP27708 2225 aa2.13□□□□□ -2.07
GDE1-202ENST00000563645 INSP01308 110 aa2.13□□□□□ -2.07
GDE1-202ENST00000563645 LINC00158P58513 81 aa2.13□□□□□ -2.07
GDE1-202ENST00000563645 PRB3Q04118 309 aaPredicted RBP2.13□□□□□ -2.07
GDE1-202ENST00000563645 LINC00472Q9H8W2 130 aa2.13□□□□□ -2.07
GDE1-202ENST00000563645 A0A087WTM6 91 aa2.12□□□□□ -2.07
GDE1-202ENST00000563645 COX7BP24311 80 aa2.12□□□□□ -2.07
GDE1-202ENST00000563645 LINC00575Q6W349 94 aa2.12□□□□□ -2.07
GDE1-202ENST00000563645 SEC16AO15027 2179 aa2.12□□□□□ -2.07
GDE1-202ENST00000563645 CDKN2A-AS1Q9UH64 79 aa2.11□□□□□ -2.07
GDE1-202ENST00000563645 RP1P56715 2156 aa2.1□□□□□ -2.07
GDE1-202ENST00000563645 USF3Q68DE3 2245 aa2.1□□□□□ -2.07
GDE1-202ENST00000563645 ABCA4P78363 2273 aa2.1□□□□□ -2.07
GDE1-202ENST00000563645 WT1-ASQ06250 92 aa2.1□□□□□ -2.07
GDE1-202ENST00000563645 RPL39P5Q59GN2 51 aa2.1□□□□□ -2.07
GDE1-202ENST00000563645 TMEM167AQ8TBQ9 72 aa2.1□□□□□ -2.07
GDE1-202ENST00000563645 DEFB108AA8MXU0 73 aa2.09□□□□□ -2.07
GDE1-202ENST00000563645 I3L2K1 104 aa2.09□□□□□ -2.07
GDE1-202ENST00000563645 DEFB134Q4QY38 66 aa2.09□□□□□ -2.07
GDE1-202ENST00000563645 Q6ZQY7 126 aa2.09□□□□□ -2.07
GDE1-202ENST00000563645 COL27A1Q8IZC6 1860 aaPredicted RBP2.08□□□□□ -2.08
GDE1-202ENST00000563645 HRES1P13985 223 aa2.08□□□□□ -2.08
GDE1-202ENST00000563645 PRO3102Q9H379 93 aa2.08□□□□□ -2.08
GDE1-202ENST00000563645 SORL1Q92673 2214 aa2.07□□□□□ -2.08
GDE1-202ENST00000563645 ALMS1Q8TCU4 4167 aa2.07□□□□□ -2.08
GDE1-202ENST00000563645 DEFB131BA0A096LNP1 70 aa2.07□□□□□ -2.08
GDE1-202ENST00000563645 TRGV1A0A0A0MS02 117 aa2.07□□□□□ -2.08
GDE1-202ENST00000563645 A0A1B0GU69 56 aa2.07□□□□□ -2.08
GDE1-202ENST00000563645 M0QY20 66 aa2.07□□□□□ -2.08
GDE1-202ENST00000563645 COX6A2Q02221 97 aa2.07□□□□□ -2.08
GDE1-202ENST00000563645 SPINT4Q6UDR6 99 aa2.07□□□□□ -2.08
GDE1-202ENST00000563645 ZNRD1Q9P1U0 126 aa2.07□□□□□ -2.08
GDE1-202ENST00000563645 NBDYA0A0U1RRE5 68 aa2.06□□□□□ -2.08
GDE1-202ENST00000563645 A0A1B0GU33 70 aa2.06□□□□□ -2.08
GDE1-202ENST00000563645 Q8IZM0 81 aa2.06□□□□□ -2.08
GDE1-202ENST00000563645 DEFB104AQ8WTQ1 72 aa2.06□□□□□ -2.08
GDE1-202ENST00000563645 Q96NJ1 140 aa2.06□□□□□ -2.08
GDE1-202ENST00000563645 MED13LQ71F56 2210 aa2.06□□□□□ -2.08
GDE1-202ENST00000563645 C10orf55Q5SWW7 151 aa2.05□□□□□ -2.08
GDE1-202ENST00000563645 PRR9Q5T870 116 aa2.05□□□□□ -2.08
GDE1-202ENST00000563645 PATE1Q8WXA2 126 aa2.05□□□□□ -2.08
GDE1-202ENST00000563645 COX14Q96I36 57 aa2.05□□□□□ -2.08
GDE1-202ENST00000563645 PDE4DIPQ5VU43 2346 aa2.05□□□□□ -2.08
GDE1-202ENST00000563645 H0YGG7 62 aa2.04□□□□□ -2.08
GDE1-202ENST00000563645 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.04□□□□□ -2.08
GDE1-202ENST00000563645 DEFB132Q7Z7B7 95 aa2.04□□□□□ -2.08
GDE1-202ENST00000563645 LINC00304Q8N9R0 145 aa2.04□□□□□ -2.08
GDE1-202ENST00000563645 K7EIM0 57 aa2.03□□□□□ -2.08
GDE1-202ENST00000563645 RNF5Q99942 180 aa2.03□□□□□ -2.08
GDE1-202ENST00000563645 PTPRQQ9UMZ3 2332 aa2.03□□□□□ -2.08
GDE1-202ENST00000563645 K7EQZ3 153 aa2.02□□□□□ -2.09
GDE1-202ENST00000563645 MRPL33O75394 65 aaKnown RBP2.02□□□□□ -2.09
GDE1-202ENST00000563645 IGLV7-43P04211 117 aa2.02□□□□□ -2.09
GDE1-202ENST00000563645 COX17Q14061 63 aa2.02□□□□□ -2.09
GDE1-202ENST00000563645 CCL19Q99731 98 aa2.02□□□□□ -2.09
GDE1-202ENST00000563645 URB1O60287 2271 aaKnown RBP2.01□□□□□ -2.09
GDE1-202ENST00000563645 C5orf56Q8N8D9 126 aa2.01□□□□□ -2.09
GDE1-202ENST00000563645 RTTNQ86VV8 2226 aa2.01□□□□□ -2.09
GDE1-202ENST00000563645 IGLV5-48A0A075B6I7 105 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms