RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.07□□□□□ -1.6
CDH1-203ENST00000561751 BPY2O14599 106 aa5.07□□□□□ -1.6
CDH1-203ENST00000561751 LINC00158P58513 81 aa5.07□□□□□ -1.6
CDH1-203ENST00000561751 UBE2BP63146 152 aa5.07□□□□□ -1.6
CDH1-203ENST00000561751 COX17Q14061 63 aa5.07□□□□□ -1.6
CDH1-203ENST00000561751 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
CDH1-203ENST00000561751 STHQ8IWL8 128 aa5.07□□□□□ -1.6
CDH1-203ENST00000561751 C5orf56Q8N8D9 126 aa5.07□□□□□ -1.6
CDH1-203ENST00000561751 WFDC9Q8NEX5 89 aa5.07□□□□□ -1.6
CDH1-203ENST00000561751 OCR1Q9BZK8 76 aa5.07□□□□□ -1.6
CDH1-203ENST00000561751 STAB1Q9NY15 2570 aa5.07□□□□□ -1.6
CDH1-203ENST00000561751 PLXNB1O43157 2135 aa5.06□□□□□ -1.6
CDH1-203ENST00000561751 ACANP16112 2415 aa5.06□□□□□ -1.6
CDH1-203ENST00000561751 K7EQG2 157 aa5.06□□□□□ -1.6
CDH1-203ENST00000561751 LMO4P61968 165 aa5.06□□□□□ -1.6
CDH1-203ENST00000561751 HAMPP81172 84 aa5.06□□□□□ -1.6
CDH1-203ENST00000561751 FBXL19-AS1Q494R0 122 aa5.06□□□□□ -1.6
CDH1-203ENST00000561751 LINC00575Q6W349 94 aa5.06□□□□□ -1.6
CDH1-203ENST00000561751 PHF5AQ7RTV0 110 aaKnown RBP5.06□□□□□ -1.6
CDH1-203ENST00000561751 MPLKIPQ8TAP9 179 aa5.06□□□□□ -1.6
CDH1-203ENST00000561751 RETNQ9HD89 108 aa5.06□□□□□ -1.6
CDH1-203ENST00000561751 NSD1Q96L73 2696 aaPredicted RBP5.05□□□□□ -1.6
CDH1-203ENST00000561751 FAM229BQ4G0N7 80 aa5.05□□□□□ -1.6
CDH1-203ENST00000561751 RNASE13Q5GAN3 156 aaKnown RBP5.05□□□□□ -1.6
CDH1-203ENST00000561751 DEFB104AQ8WTQ1 72 aa5.05□□□□□ -1.6
CDH1-203ENST00000561751 IGHV4-30-2A0A087WSY4 118 aa5.04□□□□□ -1.6
CDH1-203ENST00000561751 G3V318 75 aa5.04□□□□□ -1.6
CDH1-203ENST00000561751 SLPIP03973 132 aa5.04□□□□□ -1.6
CDH1-203ENST00000561751 ELOF1P60002 83 aaKnown RBP5.04□□□□□ -1.6
CDH1-203ENST00000561751 KRTAP10-9P60411 292 aa5.04□□□□□ -1.6
CDH1-203ENST00000561751 ATP11AUNQ6ZP68 121 aa5.04□□□□□ -1.6
CDH1-203ENST00000561751 X6R8D5 127 aa5.04□□□□□ -1.6
CDH1-203ENST00000561751 CADP27708 2225 aa5.04□□□□□ -1.6
CDH1-203ENST00000561751 FLNAP21333 2647 aaKnown RBP5.04□□□□□ -1.6
CDH1-203ENST00000561751 JMJD1CQ15652 2540 aa5.03□□□□□ -1.6
CDH1-203ENST00000561751 NDUFB1O75438 58 aa5.03□□□□□ -1.6
CDH1-203ENST00000561751 FSHBP01225 129 aa5.03□□□□□ -1.6
CDH1-203ENST00000561751 NANOS2P60321 138 aaKnown RBP5.03□□□□□ -1.6
CDH1-203ENST00000561751 Q8N1X5 172 aa5.03□□□□□ -1.6
CDH1-203ENST00000561751 LINC00588Q9Y4M8 146 aa5.03□□□□□ -1.6
CDH1-203ENST00000561751 A0A096LNT2 108 aa5.02□□□□□ -1.61
CDH1-203ENST00000561751 IGHV3OR16-9A0A0B4J2B5 98 aa5.02□□□□□ -1.61
CDH1-203ENST00000561751 UBE2AP49459 152 aa5.02□□□□□ -1.61
CDH1-203ENST00000561751 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.02□□□□□ -1.61
CDH1-203ENST00000561751 Q6ZRP5 223 aa5.02□□□□□ -1.61
CDH1-203ENST00000561751 Q6ZTI0 123 aa5.02□□□□□ -1.61
CDH1-203ENST00000561751 LIMD2Q9BT23 127 aa5.02□□□□□ -1.61
CDH1-203ENST00000561751 NBEAL1Q6ZS30 2694 aa5.01□□□□□ -1.61
CDH1-203ENST00000561751 COL6A5A8TX70 2615 aa5.01□□□□□ -1.61
CDH1-203ENST00000561751 CSPG4Q6UVK1 2322 aa5.01□□□□□ -1.61
CDH1-203ENST00000561751 TRBV6-8A0A0A6YYG3 113 aa5.01□□□□□ -1.61
CDH1-203ENST00000561751 CCL24O00175 119 aa5.01□□□□□ -1.61
CDH1-203ENST00000561751 UBE2L6O14933 153 aa5.01□□□□□ -1.61
CDH1-203ENST00000561751 IGHV4-59P01825 116 aa5.01□□□□□ -1.61
CDH1-203ENST00000561751 VPREB1P12018 145 aa5.01□□□□□ -1.61
CDH1-203ENST00000561751 DEFB1P60022 68 aa5.01□□□□□ -1.61
CDH1-203ENST00000561751 Q8IZM0 81 aa5.01□□□□□ -1.61
CDH1-203ENST00000561751 ZCCHC13Q8WW36 166 aaKnown RBP5.01□□□□□ -1.61
CDH1-203ENST00000561751 ATRQ13535 2644 aa5□□□□□ -1.61
CDH1-203ENST00000561751 ZNF469Q96JG9 3925 aaPredicted RBP5□□□□□ -1.61
CDH1-203ENST00000561751 IGHV4-28A0A0C4DH34 117 aa5□□□□□ -1.61
CDH1-203ENST00000561751 COX7BP24311 80 aa5□□□□□ -1.61
CDH1-203ENST00000561751 PROK1P58294 105 aa5□□□□□ -1.61
CDH1-203ENST00000561751 PRB3Q04118 309 aaPredicted RBP5□□□□□ -1.61
CDH1-203ENST00000561751 SPINK13Q1W4C9 94 aa5□□□□□ -1.61
CDH1-203ENST00000561751 Q6ZSN1 163 aa5□□□□□ -1.61
CDH1-203ENST00000561751 SPATA3Q8NHX4 192 aa5□□□□□ -1.61
CDH1-203ENST00000561751 TRAV22A0A0B4J277 110 aa4.99□□□□□ -1.61
CDH1-203ENST00000561751 M0R378 163 aa4.99□□□□□ -1.61
CDH1-203ENST00000561751 SYCNQ0VAF6 134 aa4.99□□□□□ -1.61
CDH1-203ENST00000561751 RBM12B-AS1Q9P1G2 102 aa4.99□□□□□ -1.61
CDH1-203ENST00000561751 HRNRQ86YZ3 2850 aaPredicted RBP4.99□□□□□ -1.61
CDH1-203ENST00000561751 FN1P02751 2386 aaKnown RBP4.99□□□□□ -1.61
CDH1-203ENST00000561751 PLCE1Q9P212 2302 aa4.98□□□□□ -1.61
CDH1-203ENST00000561751 IGKV4-1P06312 121 aa4.98□□□□□ -1.61
CDH1-203ENST00000561751 CD164L2Q6UWJ8 174 aa4.98□□□□□ -1.61
CDH1-203ENST00000561751 C1orf64Q8NEQ6 169 aa4.98□□□□□ -1.61
CDH1-203ENST00000561751 WWC2-AS2Q96NR7 200 aa4.98□□□□□ -1.61
CDH1-203ENST00000561751 CELA1Q9UNI1 258 aa4.98□□□□□ -1.61
CDH1-203ENST00000561751 ARHGAP32A7KAX9 2087 aa4.98□□□□□ -1.61
CDH1-203ENST00000561751 ABCA1O95477 2261 aa4.97□□□□□ -1.61
CDH1-203ENST00000561751 A0A087X002 238 aa4.97□□□□□ -1.61
CDH1-203ENST00000561751 LYNX1G3V0Z9 82 aa4.97□□□□□ -1.61
CDH1-203ENST00000561751 PSCAO43653 123 aa4.97□□□□□ -1.61
CDH1-203ENST00000561751 IGHV3-11P01762 117 aa4.97□□□□□ -1.61
CDH1-203ENST00000561751 LYNX1P0DP58 116 aa4.97□□□□□ -1.61
CDH1-203ENST00000561751 Q9UF83 564 aa4.97□□□□□ -1.61
CDH1-203ENST00000561751 IGHV3-73A0A0B4J1V6 119 aa4.96□□□□□ -1.62
CDH1-203ENST00000561751 IGHV4-61A0A0C4DH41 118 aa4.96□□□□□ -1.62
CDH1-203ENST00000561751 A0A1W2PPR1 153 aa4.96□□□□□ -1.62
CDH1-203ENST00000561751 SPANXA2-OT1Q8N9U9 137 aa4.96□□□□□ -1.62
CDH1-203ENST00000561751 LOC100131303A0A0U1RQF7 123 aa4.95□□□□□ -1.62
CDH1-203ENST00000561751 H3BPC8 53 aa4.95□□□□□ -1.62
CDH1-203ENST00000561751 C6orf99Q4VX62 202 aa4.95□□□□□ -1.62
CDH1-203ENST00000561751 LINC00269Q8N2A0 174 aa4.95□□□□□ -1.62
CDH1-203ENST00000561751 Q9BRP9 147 aa4.95□□□□□ -1.62
CDH1-203ENST00000561751 TOMM7Q9P0U1 55 aa4.95□□□□□ -1.62
CDH1-203ENST00000561751 TLN2Q9Y4G6 2542 aa4.95□□□□□ -1.62
CDH1-203ENST00000561751 A0A1B0GUV1 79 aa4.94□□□□□ -1.62
CDH1-203ENST00000561751 LOC101927531A0A1B0GV80 90 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms