RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 XAGE1AQ9HD64 81 aa12.58□□□□□ -0.4
IRF9-215ENST00000561415 GAGE2DQ9UEU5 116 aa12.58□□□□□ -0.4
IRF9-215ENST00000561415 A4D1N5 150 aa12.57□□□□□ -0.4
IRF9-215ENST00000561415 LINC00336Q6ZUF6 198 aa12.57□□□□□ -0.4
IRF9-215ENST00000561415 TMEM238LA0A1B0GVL6 79 aa12.56□□□□□ -0.4
IRF9-215ENST00000561415 A6NJY4 79 aa12.56□□□□□ -0.4
IRF9-215ENST00000561415 PKD1P98161 4303 aa12.56□□□□□ -0.4
IRF9-215ENST00000561415 BATFQ16520 125 aa12.56□□□□□ -0.4
IRF9-215ENST00000561415 PKIGQ9Y2B9 76 aa12.56□□□□□ -0.4
IRF9-215ENST00000561415 IGLV5-52A0A0A0MRZ9 124 aa12.54□□□□□ -0.4
IRF9-215ENST00000561415 FUSP35637 526 aaKnown RBP eCLIP12.54□□□□□ -0.4
IRF9-215ENST00000561415 LINC01620Q4KN68 170 aa12.54□□□□□ -0.4
IRF9-215ENST00000561415 C16orf90A8MZG2 172 aa12.53□□□□□ -0.4
IRF9-215ENST00000561415 GAGE2BQ13066 116 aa12.53□□□□□ -0.4
IRF9-215ENST00000561415 C9orf129Q5T035 196 aaKnown RBP12.53□□□□□ -0.4
IRF9-215ENST00000561415 SDIM1Q6ZPB5 146 aa12.53□□□□□ -0.4
IRF9-215ENST00000561415 RYR3Q15413 4870 aa12.52□□□□□ -0.41
IRF9-215ENST00000561415 A0A096LNI7 61 aa12.52□□□□□ -0.41
IRF9-215ENST00000561415 PCP4P48539 62 aa12.52□□□□□ -0.41
IRF9-215ENST00000561415 KRTAP10-2P60368 255 aa12.52□□□□□ -0.41
IRF9-215ENST00000561415 NHP2Q9NX24 153 aaKnown RBP12.52□□□□□ -0.41
IRF9-215ENST00000561415 NDUFC2O95298 119 aa12.51□□□□□ -0.41
IRF9-215ENST00000561415 Q8NDZ9 215 aa12.51□□□□□ -0.41
IRF9-215ENST00000561415 DNAH5Q8TE73 4624 aa12.51□□□□□ -0.41
IRF9-215ENST00000561415 A0A1B0GWB2 263 aa12.5□□□□□ -0.41
IRF9-215ENST00000561415 A6NDN8 102 aa12.5□□□□□ -0.41
IRF9-215ENST00000561415 CFC1BP0CG36 223 aa12.5□□□□□ -0.41
IRF9-215ENST00000561415 CFC1P0CG37 223 aa12.5□□□□□ -0.41
IRF9-215ENST00000561415 COL5A1-AS1Q5SY13 56 aa12.49□□□□□ -0.41
IRF9-215ENST00000561415 PGPEP1Q9NXJ5 209 aa12.49□□□□□ -0.41
IRF9-215ENST00000561415 A0A0B4J2C4 111 aa12.48□□□□□ -0.41
IRF9-215ENST00000561415 IGKV2-24A0A0C4DH68 120 aa12.48□□□□□ -0.41
IRF9-215ENST00000561415 IGKV2-28A0A075B6P5 120 aa12.48□□□□□ -0.41
IRF9-215ENST00000561415 IGKV2D-28P01615 120 aa12.48□□□□□ -0.41
IRF9-215ENST00000561415 K7ERJ3 54 aa12.47□□□□□ -0.41
IRF9-215ENST00000561415 CHTF8P0CG12 524 aa12.46□□□□□ -0.41
IRF9-215ENST00000561415 VPREB1P12018 145 aa12.46□□□□□ -0.41
IRF9-215ENST00000561415 LINC00474Q9P2X8 69 aa12.46□□□□□ -0.41
IRF9-215ENST00000561415 PLA2G2DQ9UNK4 145 aa12.46□□□□□ -0.41
IRF9-215ENST00000561415 PRR3P79522 188 aaKnown RBP12.46□□□□□ -0.42
IRF9-215ENST00000561415 PKHD1P08F94 4074 aa12.45□□□□□ -0.42
IRF9-215ENST00000561415 RAB37Q96AX2 223 aa12.45□□□□□ -0.42
IRF9-215ENST00000561415 SERTAD4-AS1Q5TG53 156 aa12.44□□□□□ -0.42
IRF9-215ENST00000561415 LINC00337Q8N6G1 96 aa12.44□□□□□ -0.42
IRF9-215ENST00000561415 FAM168BA1KXE4 195 aa12.43□□□□□ -0.42
IRF9-215ENST00000561415 TRBV10-2A0A0K0K1G8 114 aa12.43□□□□□ -0.42
IRF9-215ENST00000561415 A0A1B0GVY2 172 aa12.43□□□□□ -0.42
IRF9-215ENST00000561415 NCR3O14931 201 aa12.43□□□□□ -0.42
IRF9-215ENST00000561415 PRO1854Q9UHT4 67 aa12.43□□□□□ -0.42
IRF9-215ENST00000561415 TRAV13-2A0A0B4J235 113 aa12.42□□□□□ -0.42
IRF9-215ENST00000561415 KRTAP7-1Q8IUC3 87 aa12.42□□□□□ -0.42
IRF9-215ENST00000561415 SPACA4Q8TDM5 124 aa12.42□□□□□ -0.42
IRF9-215ENST00000561415 IGLV5-37A0A075B6J1 123 aa12.41□□□□□ -0.42
IRF9-215ENST00000561415 PANO1I0J062 215 aa12.41□□□□□ -0.42
IRF9-215ENST00000561415 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.41□□□□□ -0.42
IRF9-215ENST00000561415 FAM19A5Q7Z5A7 132 aaPredicted RBP12.4□□□□□ -0.42
IRF9-215ENST00000561415 NKAPP1Q8N9T2 125 aa12.39□□□□□ -0.43
IRF9-215ENST00000561415 A0A1W2PNN7 141 aa12.38□□□□□ -0.43
IRF9-215ENST00000561415 M0R378 163 aa12.38□□□□□ -0.43
IRF9-215ENST00000561415 RPL13AP40429 203 aaKnown RBP12.38□□□□□ -0.43
IRF9-215ENST00000561415 TAX1BP3O14907 124 aa12.36□□□□□ -0.43
IRF9-215ENST00000561415 OR13C6PQ8NH95 151 aa12.36□□□□□ -0.43
IRF9-215ENST00000561415 TMEM126AQ9H061 195 aa12.36□□□□□ -0.43
IRF9-215ENST00000561415 C22orf24Q9Y442 160 aa12.36□□□□□ -0.43
IRF9-215ENST00000561415 IGLV6-57P01721 117 aa12.35□□□□□ -0.43
IRF9-215ENST00000561415 S100A7L2Q5SY68 101 aa12.35□□□□□ -0.43
IRF9-215ENST00000561415 H7C2G1 150 aa12.35□□□□□ -0.43
IRF9-215ENST00000561415 KRTAP10-1P60331 282 aa12.35□□□□□ -0.43
IRF9-215ENST00000561415 DNAH8Q96JB1 4490 aa12.35□□□□□ -0.43
IRF9-215ENST00000561415 M0QXV9 152 aa12.34□□□□□ -0.43
IRF9-215ENST00000561415 TSPAN13O95857 204 aa12.34□□□□□ -0.43
IRF9-215ENST00000561415 MRPL55Q7Z7F7 128 aaKnown RBP12.34□□□□□ -0.43
IRF9-215ENST00000561415 C7orf33Q8WU49 177 aa12.34□□□□□ -0.43
IRF9-215ENST00000561415 TRBV10-3A0A0K0K1G6 114 aa12.33□□□□□ -0.44
IRF9-215ENST00000561415 EPM2AB3EWF7 344 aa12.33□□□□□ -0.44
IRF9-215ENST00000561415 DPH3Q96FX2 82 aa12.33□□□□□ -0.44
IRF9-215ENST00000561415 A0A087WYN8 130 aa12.33□□□□□ -0.44
IRF9-215ENST00000561415 C21orf62-AS1Q17RA5 79 aa12.33□□□□□ -0.44
IRF9-215ENST00000561415 Q6ZSA8 131 aa12.33□□□□□ -0.44
IRF9-215ENST00000561415 UBE2V1Q13404 147 aa12.32□□□□□ -0.44
IRF9-215ENST00000561415 Q1RN00 199 aa12.32□□□□□ -0.44
IRF9-215ENST00000561415 GAGE10A6NGK3 116 aa12.31□□□□□ -0.44
IRF9-215ENST00000561415 LINC00167Q96N53 147 aa12.3□□□□□ -0.44
IRF9-215ENST00000561415 PLAC8Q9NZF1 115 aa12.3□□□□□ -0.44
IRF9-215ENST00000561415 FAM30AQ9NZY2 134 aa12.3□□□□□ -0.44
IRF9-215ENST00000561415 C9orf118A6NHY6 69 aa12.3□□□□□ -0.44
IRF9-215ENST00000561415 LRP1BQ9NZR2 4599 aa12.29□□□□□ -0.44
IRF9-215ENST00000561415 SMIM11BQ8TCY0 68 aa12.29□□□□□ -0.44
IRF9-215ENST00000561415 NAA38Q9BRA0 125 aaKnown RBP12.28□□□□□ -0.44
IRF9-215ENST00000561415 H3BUT2 72 aa12.28□□□□□ -0.44
IRF9-215ENST00000561415 RPL28P46779 137 aaKnown RBP12.28□□□□□ -0.44
IRF9-215ENST00000561415 IGLV1-50A0A075B6I6 118 aa12.27□□□□□ -0.45
IRF9-215ENST00000561415 PHF5AQ7RTV0 110 aaKnown RBP12.27□□□□□ -0.45
IRF9-215ENST00000561415 DYNC1H1Q14204 4646 aaKnown RBP12.26□□□□□ -0.45
IRF9-215ENST00000561415 TRAV23DV6A0A075B6W5 121 aa12.26□□□□□ -0.45
IRF9-215ENST00000561415 RPL37AP8A6NKH3 93 aa12.26□□□□□ -0.45
IRF9-215ENST00000561415 TRIAP1O43715 76 aa12.25□□□□□ -0.45
IRF9-215ENST00000561415 KCNQ1DNQ9H478 68 aa12.25□□□□□ -0.45
IRF9-215ENST00000561415 PSMB2P49721 201 aa12.25□□□□□ -0.45
IRF9-215ENST00000561415 CIRBP-AS1Q8TBR5 109 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms