RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 Q6ZRP5 223 aa6.68□□□□□ -1.34
USP3-219ENST00000561326 C9orf163Q8N9P6 203 aa6.68□□□□□ -1.34
USP3-219ENST00000561326 XAGE1AQ9HD64 81 aa6.68□□□□□ -1.34
USP3-219ENST00000561326 C9orf118A6NHY6 69 aa6.67□□□□□ -1.34
USP3-219ENST00000561326 TAX1BP3O14907 124 aa6.67□□□□□ -1.34
USP3-219ENST00000561326 GAGE2BQ13066 116 aa6.67□□□□□ -1.34
USP3-219ENST00000561326 TRBV10-2A0A0K0K1G8 114 aa6.66□□□□□ -1.34
USP3-219ENST00000561326 Q1RN00 199 aa6.66□□□□□ -1.34
USP3-219ENST00000561326 OR13C6PQ8NH95 151 aa6.66□□□□□ -1.34
USP3-219ENST00000561326 PGPEP1Q9NXJ5 209 aa6.66□□□□□ -1.34
USP3-219ENST00000561326 KMT2AQ03164 3969 aa6.66□□□□□ -1.34
USP3-219ENST00000561326 C16orf90A8MZG2 172 aa6.65□□□□□ -1.34
USP3-219ENST00000561326 RPL13AP40429 203 aaKnown RBP6.65□□□□□ -1.34
USP3-219ENST00000561326 PSMB2P49721 201 aa6.65□□□□□ -1.34
USP3-219ENST00000561326 S100A7L2Q5SY68 101 aa6.65□□□□□ -1.34
USP3-219ENST00000561326 TMEM126AQ9H061 195 aa6.65□□□□□ -1.34
USP3-219ENST00000561326 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.34
USP3-219ENST00000561326 PLA2G2DQ9UNK4 145 aa6.65□□□□□ -1.34
USP3-219ENST00000561326 DNAH10Q8IVF4 4471 aa6.65□□□□□ -1.34
USP3-219ENST00000561326 IGKV2-28A0A075B6P5 120 aa6.64□□□□□ -1.35
USP3-219ENST00000561326 H3BUT2 72 aa6.64□□□□□ -1.35
USP3-219ENST00000561326 H7C2G1 150 aa6.64□□□□□ -1.35
USP3-219ENST00000561326 M0R378 163 aa6.64□□□□□ -1.35
USP3-219ENST00000561326 RTL8CO15255 209 aa6.64□□□□□ -1.35
USP3-219ENST00000561326 IGKV2D-28P01615 120 aa6.64□□□□□ -1.35
USP3-219ENST00000561326 COX6CP09669 75 aa6.64□□□□□ -1.35
USP3-219ENST00000561326 TNP2Q05952 138 aa6.64□□□□□ -1.35
USP3-219ENST00000561326 LYRM7Q5U5X0 104 aa6.64□□□□□ -1.35
USP3-219ENST00000561326 NKAPP1Q8N9T2 125 aa6.64□□□□□ -1.35
USP3-219ENST00000561326 CBY1Q9Y3M2 126 aa6.64□□□□□ -1.35
USP3-219ENST00000561326 IGLV5-52A0A0A0MRZ9 124 aa6.63□□□□□ -1.35
USP3-219ENST00000561326 TSPAN13O95857 204 aa6.63□□□□□ -1.35
USP3-219ENST00000561326 SCGB1C2P0DMR2 95 aa6.63□□□□□ -1.35
USP3-219ENST00000561326 FABP2P12104 132 aa6.63□□□□□ -1.35
USP3-219ENST00000561326 PRR3P79522 188 aaKnown RBP6.63□□□□□ -1.35
USP3-219ENST00000561326 C9orf129Q5T035 196 aaKnown RBP6.63□□□□□ -1.35
USP3-219ENST00000561326 SDIM1Q6ZPB5 146 aa6.63□□□□□ -1.35
USP3-219ENST00000561326 LINC00336Q6ZUF6 198 aa6.63□□□□□ -1.35
USP3-219ENST00000561326 LINC00337Q8N6G1 96 aa6.63□□□□□ -1.35
USP3-219ENST00000561326 DPH3Q96FX2 82 aa6.63□□□□□ -1.35
USP3-219ENST00000561326 NCR3O14931 201 aa6.62□□□□□ -1.35
USP3-219ENST00000561326 VPREB1P12018 145 aa6.62□□□□□ -1.35
USP3-219ENST00000561326 DNAH2Q9P225 4427 aa6.62□□□□□ -1.35
USP3-219ENST00000561326 A0A096LNI7 61 aa6.61□□□□□ -1.35
USP3-219ENST00000561326 IGKV2-24A0A0C4DH68 120 aa6.61□□□□□ -1.35
USP3-219ENST00000561326 A0A1W2PPM0 123 aa6.61□□□□□ -1.35
USP3-219ENST00000561326 VAMP3Q15836 100 aa6.61□□□□□ -1.35
USP3-219ENST00000561326 NAA38Q9BRA0 125 aaKnown RBP6.61□□□□□ -1.35
USP3-219ENST00000561326 IGLV5-37A0A075B6J1 123 aa6.6□□□□□ -1.35
USP3-219ENST00000561326 A0A1B0GV90 55 aa6.59□□□□□ -1.35
USP3-219ENST00000561326 RPL28P46779 137 aaKnown RBP6.59□□□□□ -1.35
USP3-219ENST00000561326 Q8NDZ9 215 aa6.59□□□□□ -1.35
USP3-219ENST00000561326 SMIM11BQ8TCY0 68 aa6.59□□□□□ -1.35
USP3-219ENST00000561326 TRBV20-1A0A075B6N2 111 aa6.58□□□□□ -1.36
USP3-219ENST00000561326 H0YGX0 51 aa6.58□□□□□ -1.36
USP3-219ENST00000561326 IGLV6-57P01721 117 aa6.58□□□□□ -1.36
USP3-219ENST00000561326 LINC01620Q4KN68 170 aa6.58□□□□□ -1.36
USP3-219ENST00000561326 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
USP3-219ENST00000561326 GTF2H5Q6ZYL4 71 aa6.58□□□□□ -1.36
USP3-219ENST00000561326 C22orf24Q9Y442 160 aa6.58□□□□□ -1.36
USP3-219ENST00000561326 DNAH17Q9UFH2 4485 aa6.57□□□□□ -1.36
USP3-219ENST00000561326 TRBV10-3A0A0K0K1G6 114 aa6.57□□□□□ -1.36
USP3-219ENST00000561326 FAM168BA1KXE4 195 aa6.57□□□□□ -1.36
USP3-219ENST00000561326 GAGE10A6NGK3 116 aa6.57□□□□□ -1.36
USP3-219ENST00000561326 TRIAP1O43715 76 aa6.57□□□□□ -1.36
USP3-219ENST00000561326 FAM19A5Q7Z5A7 132 aaPredicted RBP6.57□□□□□ -1.36
USP3-219ENST00000561326 MRPL55Q7Z7F7 128 aaKnown RBP6.57□□□□□ -1.36
USP3-219ENST00000561326 FRAS1Q86XX4 4008 aa6.57□□□□□ -1.36
USP3-219ENST00000561326 SNCGO76070 127 aa6.56□□□□□ -1.36
USP3-219ENST00000561326 CHTF8P0CG12 524 aa6.56□□□□□ -1.36
USP3-219ENST00000561326 C7orf33Q8WU49 177 aa6.56□□□□□ -1.36
USP3-219ENST00000561326 SPCS1Q9Y6A9 102 aa6.56□□□□□ -1.36
USP3-219ENST00000561326 TRAV23DV6A0A075B6W5 121 aa6.55□□□□□ -1.36
USP3-219ENST00000561326 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
USP3-219ENST00000561326 HECTD4Q9Y4D8 3996 aa6.55□□□□□ -1.36
USP3-219ENST00000561326 A0A1W2PNN7 141 aa6.54□□□□□ -1.36
USP3-219ENST00000561326 M0QXV9 152 aa6.54□□□□□ -1.36
USP3-219ENST00000561326 FUSP35637 526 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP3-219ENST00000561326 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
USP3-219ENST00000561326 IGLV1-50A0A075B6I6 118 aa6.53□□□□□ -1.36
USP3-219ENST00000561326 TRBV7-6A0A0J9YX20 115 aa6.53□□□□□ -1.36
USP3-219ENST00000561326 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
USP3-219ENST00000561326 K7EP34 96 aa6.53□□□□□ -1.36
USP3-219ENST00000561326 ZNF73O43830 326 aaPredicted RBP6.53□□□□□ -1.36
USP3-219ENST00000561326 KRTAP10-2P60368 255 aa6.53□□□□□ -1.36
USP3-219ENST00000561326 UBE2V1Q13404 147 aa6.53□□□□□ -1.36
USP3-219ENST00000561326 ATXN8Q156A1 80 aa6.53□□□□□ -1.36
USP3-219ENST00000561326 C6orf99Q4VX62 202 aa6.53□□□□□ -1.36
USP3-219ENST00000561326 DIRC1Q969H9 104 aa6.53□□□□□ -1.36
USP3-219ENST00000561326 KCNQ1DNQ9H478 68 aa6.53□□□□□ -1.36
USP3-219ENST00000561326 SACSQ9NZJ4 4579 aa6.52□□□□□ -1.37
USP3-219ENST00000561326 A0A087WYN8 130 aa6.52□□□□□ -1.37
USP3-219ENST00000561326 PRYO14603 147 aa6.52□□□□□ -1.37
USP3-219ENST00000561326 KRTAP7-1Q8IUC3 87 aa6.52□□□□□ -1.37
USP3-219ENST00000561326 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.52□□□□□ -1.37
USP3-219ENST00000561326 HYDINQ4G0P3 5121 aa6.52□□□□□ -1.37
USP3-219ENST00000561326 SLC25A20O43772 301 aa6.51□□□□□ -1.37
USP3-219ENST00000561326 TCL1BO95988 128 aa6.51□□□□□ -1.37
USP3-219ENST00000561326 UBE2BP63146 152 aa6.51□□□□□ -1.37
USP3-219ENST00000561326 CLEC2BQ92478 149 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms