RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 A0A0U1RQV1 116 aa15.68■□□□□ 0.1
SNRPA1-215ENST00000561187 A0A0U1RRA0 63 aa15.68■□□□□ 0.1
SNRPA1-215ENST00000561187 C3orf22Q8N5N4 141 aa15.67■□□□□ 0.1
SNRPA1-215ENST00000561187 HIGD2AQ9BW72 106 aa15.67■□□□□ 0.1
SNRPA1-215ENST00000561187 COX17Q14061 63 aa15.66■□□□□ 0.1
SNRPA1-215ENST00000561187 C10orf91Q5T1B1 145 aa15.65■□□□□ 0.1
SNRPA1-215ENST00000561187 CBLN2Q8IUK8 224 aa15.65■□□□□ 0.1
SNRPA1-215ENST00000561187 FAT4Q6V0I7 4981 aa15.64■□□□□ 0.09
SNRPA1-215ENST00000561187 LINC00158P58513 81 aa15.64■□□□□ 0.09
SNRPA1-215ENST00000561187 PLEKHB2Q96CS7 222 aa15.63■□□□□ 0.09
SNRPA1-215ENST00000561187 CHTOPQ9Y3Y2 248 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-215ENST00000561187 MUC17Q685J3 4493 aa15.61■□□□□ 0.09
SNRPA1-215ENST00000561187 CDIP1Q9H305 208 aa15.6■□□□□ 0.09
SNRPA1-215ENST00000561187 IGLV7-46A0A075B6I9 117 aa15.59■□□□□ 0.09
SNRPA1-215ENST00000561187 SFTA2Q6UW10 78 aa15.57■□□□□ 0.08
SNRPA1-215ENST00000561187 NCR3O14931 201 aa15.55■□□□□ 0.08
SNRPA1-215ENST00000561187 TMEM223A0PJW6 202 aa15.54■□□□□ 0.08
SNRPA1-215ENST00000561187 APOC3P02656 99 aa15.54■□□□□ 0.08
SNRPA1-215ENST00000561187 SMIM13P0DJ93 91 aa15.54■□□□□ 0.08
SNRPA1-215ENST00000561187 KRTAP3-3Q9BYR6 98 aa15.54■□□□□ 0.08
SNRPA1-215ENST00000561187 KRTAP3-2Q9BYR7 98 aa15.54■□□□□ 0.08
SNRPA1-215ENST00000561187 TPRXLQ17RH7 258 aa15.53■□□□□ 0.08
SNRPA1-215ENST00000561187 SPRR4Q96PI1 79 aa15.53■□□□□ 0.08
SNRPA1-215ENST00000561187 MEIG1Q5JSS6 88 aa15.52■□□□□ 0.08
SNRPA1-215ENST00000561187 ATP6V1G1O75348 118 aa15.51■□□□□ 0.07
SNRPA1-215ENST00000561187 BOD1L2Q8IYS8 172 aa15.51■□□□□ 0.07
SNRPA1-215ENST00000561187 IFI27L1Q96BM0 104 aa15.5■□□□□ 0.07
SNRPA1-215ENST00000561187 PPDPFQ9H3Y8 114 aa15.49■□□□□ 0.07
SNRPA1-215ENST00000561187 MIR7-3HGQ8N6C7 128 aa15.48■□□□□ 0.07
SNRPA1-215ENST00000561187 DAND5Q8N907 189 aa15.48■□□□□ 0.07
SNRPA1-215ENST00000561187 TRAV12-1A0A0B4J245 112 aa15.46■□□□□ 0.07
SNRPA1-215ENST00000561187 PRYO14603 147 aa15.46■□□□□ 0.07
SNRPA1-215ENST00000561187 H0Y8G0 127 aa15.45■□□□□ 0.06
SNRPA1-215ENST00000561187 ZNF706Q9Y5V0 76 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-215ENST00000561187 SNAPINO95295 136 aa15.44■□□□□ 0.06
SNRPA1-215ENST00000561187 LCE2AQ5TA79 106 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-215ENST00000561187 KRTAP9-2Q9BYQ4 174 aa15.44■□□□□ 0.06
SNRPA1-215ENST00000561187 Q8NBF4 154 aa15.43■□□□□ 0.06
SNRPA1-215ENST00000561187 CHCHD1Q96BP2 118 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-215ENST00000561187 SVBPQ8N300 66 aa15.42■□□□□ 0.06
SNRPA1-215ENST00000561187 FAM19A2Q8N3H0 131 aa15.42■□□□□ 0.06
SNRPA1-215ENST00000561187 ETDCA0A1B0GVM5 59 aa15.41■□□□□ 0.06
SNRPA1-215ENST00000561187 NDUFA5Q16718 116 aa15.41■□□□□ 0.06
SNRPA1-215ENST00000561187 C4orf48Q5BLP8 95 aa15.41■□□□□ 0.06
SNRPA1-215ENST00000561187 SMCR5Q8TEV8 140 aa15.41■□□□□ 0.06
SNRPA1-215ENST00000561187 NDUFA12Q9UI09 145 aa15.41■□□□□ 0.06
SNRPA1-215ENST00000561187 TRBV10-3A0A0K0K1G6 114 aa15.4■□□□□ 0.06
SNRPA1-215ENST00000561187 SPAG11AQ6PDA7 123 aa15.4■□□□□ 0.06
SNRPA1-215ENST00000561187 CTAG1AP78358 180 aa15.38■□□□□ 0.05
SNRPA1-215ENST00000561187 LINC00337Q8N6G1 96 aa15.38■□□□□ 0.05
SNRPA1-215ENST00000561187 SPRR1AP35321 89 aa15.37■□□□□ 0.05
SNRPA1-215ENST00000561187 HERV-K104P63124 156 aa15.37■□□□□ 0.05
SNRPA1-215ENST00000561187 YPEL4Q96NS1 127 aa15.37■□□□□ 0.05
SNRPA1-215ENST00000561187 KCNQ1DNQ9H478 68 aa15.37■□□□□ 0.05
SNRPA1-215ENST00000561187 HSBP1O75506 76 aa15.36■□□□□ 0.05
SNRPA1-215ENST00000561187 TSPEAR-AS2P59090 65 aa15.36■□□□□ 0.05
SNRPA1-215ENST00000561187 MYMXA0A1B0GTQ4 84 aa15.34■□□□□ 0.05
SNRPA1-215ENST00000561187 KRTAP4-16G5E9R7 235 aaPredicted RBP15.34■□□□□ 0.05
SNRPA1-215ENST00000561187 GAGE2AQ6NT46 116 aa15.34■□□□□ 0.05
SNRPA1-215ENST00000561187 IGLV9-49A0A0B4J1Y8 123 aa15.31■□□□□ 0.04
SNRPA1-215ENST00000561187 FP248Q71RG6 208 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-215ENST00000561187 MAP1LC3CQ9BXW4 147 aa15.31■□□□□ 0.04
SNRPA1-215ENST00000561187 ERC2-IT1O76042 136 aa15.3■□□□□ 0.04
SNRPA1-215ENST00000561187 MOBPQ13875 183 aa15.3■□□□□ 0.04
SNRPA1-215ENST00000561187 LINC00587B1AMM8 73 aa15.28■□□□□ 0.04
SNRPA1-215ENST00000561187 B5MCH6 92 aa15.27■□□□□ 0.04
SNRPA1-215ENST00000561187 DDTP30046 118 aa15.27■□□□□ 0.04
SNRPA1-215ENST00000561187 S100A12P80511 92 aa15.27■□□□□ 0.04
SNRPA1-215ENST00000561187 KRTAP13-3Q3SY46 172 aa15.27■□□□□ 0.04
SNRPA1-215ENST00000561187 LINC00483Q53H64 154 aa15.27■□□□□ 0.04
SNRPA1-215ENST00000561187 PMCHL2Q9BQD1 86 aa15.26■□□□□ 0.03
SNRPA1-215ENST00000561187 LEPROTO15243 131 aa15.25■□□□□ 0.03
SNRPA1-215ENST00000561187 LEPROTL1O95214 131 aa15.24■□□□□ 0.03
SNRPA1-215ENST00000561187 SERF1AO75920 110 aa15.23■□□□□ 0.03
SNRPA1-215ENST00000561187 SPINK1P00995 79 aa15.23■□□□□ 0.03
SNRPA1-215ENST00000561187 TRGC2P03986 189 aa15.23■□□□□ 0.03
SNRPA1-215ENST00000561187 LINC00310P59036 64 aa15.23■□□□□ 0.03
SNRPA1-215ENST00000561187 Q9BRP9 147 aa15.23■□□□□ 0.03
SNRPA1-215ENST00000561187 J3QQQ9 107 aa15.21■□□□□ 0.03
SNRPA1-215ENST00000561187 NPC2P61916 151 aa15.21■□□□□ 0.03
SNRPA1-215ENST00000561187 MIEN1Q9BRT3 115 aa15.21■□□□□ 0.03
SNRPA1-215ENST00000561187 FABP4P15090 132 aa15.2■□□□□ 0.02
SNRPA1-215ENST00000561187 PLNP26678 52 aa15.19■□□□□ 0.02
SNRPA1-215ENST00000561187 SPANXB1Q9NS25 103 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-215ENST00000561187 S100A7L2Q5SY68 101 aa15.18■□□□□ 0.02
SNRPA1-215ENST00000561187 Q6ZRX8 168 aa15.18■□□□□ 0.02
SNRPA1-215ENST00000561187 TRBV10-2A0A0K0K1G8 114 aa15.17■□□□□ 0.02
SNRPA1-215ENST00000561187 LGALS3P17931 250 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-215ENST00000561187 HERVK_113P61574 105 aa15.17■□□□□ 0.02
SNRPA1-215ENST00000561187 LOC107984156A0A0G2JMH3 177 aa15.16■□□□□ 0.02
SNRPA1-215ENST00000561187 DPM2O94777 84 aa15.16■□□□□ 0.02
SNRPA1-215ENST00000561187 ARL17AQ8IVW1 177 aa15.16■□□□□ 0.02
SNRPA1-215ENST00000561187 C9orf153Q5TBE3 101 aa15.15■□□□□ 0.02
SNRPA1-215ENST00000561187 ASB16-AS1Q495Z4 193 aa15.14■□□□□ 0.01
SNRPA1-215ENST00000561187 Q8N377 158 aa15.14■□□□□ 0.01
SNRPA1-215ENST00000561187 TRAV23DV6A0A075B6W5 121 aa15.13■□□□□ 0.01
SNRPA1-215ENST00000561187 KRTAP4-1Q9BYQ7 146 aa15.13■□□□□ 0.01
SNRPA1-215ENST00000561187 HSPB8Q9UJY1 196 aa15.13■□□□□ 0.01
SNRPA1-215ENST00000561187 EIF4EBP3O60516 100 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-215ENST00000561187 IGKCP01834 107 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms