RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 CFC1P0CG37 223 aa7.33□□□□□ -1.24
SNX1-212ENST00000560861 SND1-IT1Q9HBX3 110 aa7.33□□□□□ -1.24
SNX1-212ENST00000560861 NHP2Q9NX24 153 aaKnown RBP7.33□□□□□ -1.24
SNX1-212ENST00000560861 A0A0B4J2C4 111 aa7.32□□□□□ -1.24
SNX1-212ENST00000560861 LCE6AA0A183 80 aa7.32□□□□□ -1.24
SNX1-212ENST00000560861 TMEM238LA0A1B0GVL6 79 aa7.32□□□□□ -1.24
SNX1-212ENST00000560861 A6NJY4 79 aa7.32□□□□□ -1.24
SNX1-212ENST00000560861 C14orf177Q52M58 125 aa7.32□□□□□ -1.24
SNX1-212ENST00000560861 COPS9Q8WXC6 57 aa7.32□□□□□ -1.24
SNX1-212ENST00000560861 FRAS1Q86XX4 4008 aa7.31□□□□□ -1.24
SNX1-212ENST00000560861 A0A087WTM6 91 aa7.31□□□□□ -1.24
SNX1-212ENST00000560861 NDUFC2-KCTD14E9PQ53 114 aa7.31□□□□□ -1.24
SNX1-212ENST00000560861 C1orf134Q5TEV5 83 aa7.31□□□□□ -1.24
SNX1-212ENST00000560861 Q8NDZ9 215 aa7.31□□□□□ -1.24
SNX1-212ENST00000560861 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.3□□□□□ -1.24
SNX1-212ENST00000560861 IGKV2-28A0A075B6P5 120 aa7.29□□□□□ -1.24
SNX1-212ENST00000560861 IGKV2D-28P01615 120 aa7.29□□□□□ -1.24
SNX1-212ENST00000560861 Q6ZRP5 223 aa7.29□□□□□ -1.24
SNX1-212ENST00000560861 Q8N814 137 aa7.29□□□□□ -1.24
SNX1-212ENST00000560861 DNAH11Q96DT5 4516 aa7.28□□□□□ -1.24
SNX1-212ENST00000560861 RTL8CO15255 209 aa7.28□□□□□ -1.24
SNX1-212ENST00000560861 NDUFC2O95298 119 aa7.28□□□□□ -1.24
SNX1-212ENST00000560861 C9orf118A6NHY6 69 aa7.27□□□□□ -1.25
SNX1-212ENST00000560861 C9orf129Q5T035 196 aaKnown RBP7.27□□□□□ -1.25
SNX1-212ENST00000560861 XAGE1AQ9HD64 81 aa7.27□□□□□ -1.25
SNX1-212ENST00000560861 PRO1854Q9UHT4 67 aa7.27□□□□□ -1.25
SNX1-212ENST00000560861 TSPAN13O95857 204 aa7.26□□□□□ -1.25
SNX1-212ENST00000560861 LINC00337Q8N6G1 96 aa7.26□□□□□ -1.25
SNX1-212ENST00000560861 C9orf163Q8N9P6 203 aa7.26□□□□□ -1.25
SNX1-212ENST00000560861 RAB37Q96AX2 223 aa7.26□□□□□ -1.25
SNX1-212ENST00000560861 HECTD4Q9Y4D8 3996 aa7.26□□□□□ -1.25
SNX1-212ENST00000560861 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.25□□□□□ -1.25
SNX1-212ENST00000560861 LOC107984640A0A0U1RRK4 108 aa7.25□□□□□ -1.25
SNX1-212ENST00000560861 VPREB1P12018 145 aa7.25□□□□□ -1.25
SNX1-212ENST00000560861 PLA2G2DQ9UNK4 145 aa7.25□□□□□ -1.25
SNX1-212ENST00000560861 FAT2Q9NYQ8 4349 aa7.25□□□□□ -1.25
SNX1-212ENST00000560861 A0A1B0GV90 55 aa7.24□□□□□ -1.25
SNX1-212ENST00000560861 TNP2Q05952 138 aa7.24□□□□□ -1.25
SNX1-212ENST00000560861 GAGE2EQ4V326 116 aa7.24□□□□□ -1.25
SNX1-212ENST00000560861 GAGE2DQ9UEU5 116 aa7.24□□□□□ -1.25
SNX1-212ENST00000560861 RPL13AP40429 203 aaKnown RBP7.23□□□□□ -1.25
SNX1-212ENST00000560861 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
SNX1-212ENST00000560861 RPL18AQ02543 176 aaKnown RBP7.23□□□□□ -1.25
SNX1-212ENST00000560861 SDIM1Q6ZPB5 146 aa7.23□□□□□ -1.25
SNX1-212ENST00000560861 KRTAP7-1Q8IUC3 87 aa7.23□□□□□ -1.25
SNX1-212ENST00000560861 NAA38Q9BRA0 125 aaKnown RBP7.23□□□□□ -1.25
SNX1-212ENST00000560861 IGLV5-37A0A075B6J1 123 aa7.22□□□□□ -1.25
SNX1-212ENST00000560861 A0A096LNI7 61 aa7.22□□□□□ -1.25
SNX1-212ENST00000560861 TRAV13-2A0A0B4J235 113 aa7.22□□□□□ -1.25
SNX1-212ENST00000560861 TRBV10-2A0A0K0K1G8 114 aa7.22□□□□□ -1.25
SNX1-212ENST00000560861 LOC100996750A0A140TA64 210 aa7.22□□□□□ -1.25
SNX1-212ENST00000560861 H3BUT2 72 aa7.22□□□□□ -1.25
SNX1-212ENST00000560861 KRTAP4-6Q9BYQ5 205 aa7.22□□□□□ -1.25
SNX1-212ENST00000560861 DNAH5Q8TE73 4624 aa7.21□□□□□ -1.25
SNX1-212ENST00000560861 A0A1W2PPM0 123 aa7.21□□□□□ -1.26
SNX1-212ENST00000560861 C16orf90A8MZG2 172 aa7.21□□□□□ -1.26
SNX1-212ENST00000560861 SERTAD4-AS1Q5TG53 156 aa7.21□□□□□ -1.26
SNX1-212ENST00000560861 IGLV6-57P01721 117 aa7.2□□□□□ -1.26
SNX1-212ENST00000560861 GAGE2BQ13066 116 aa7.2□□□□□ -1.26
SNX1-212ENST00000560861 DNAH8Q96JB1 4490 aa7.19□□□□□ -1.26
SNX1-212ENST00000560861 FAM168BA1KXE4 195 aa7.19□□□□□ -1.26
SNX1-212ENST00000560861 NCR3O14931 201 aa7.19□□□□□ -1.26
SNX1-212ENST00000560861 RPL28P46779 137 aaKnown RBP7.19□□□□□ -1.26
SNX1-212ENST00000560861 LINC01620Q4KN68 170 aa7.19□□□□□ -1.26
SNX1-212ENST00000560861 PKD1P98161 4303 aa7.18□□□□□ -1.26
SNX1-212ENST00000560861 H7C2G1 150 aa7.18□□□□□ -1.26
SNX1-212ENST00000560861 TRIAP1O43715 76 aa7.18□□□□□ -1.26
SNX1-212ENST00000560861 FUSP35637 526 aaKnown RBP eCLIP7.18□□□□□ -1.26
SNX1-212ENST00000560861 PKIGQ9Y2B9 76 aa7.18□□□□□ -1.26
SNX1-212ENST00000560861 EPM2AB3EWF7 344 aa7.17□□□□□ -1.26
SNX1-212ENST00000560861 PANO1I0J062 215 aa7.17□□□□□ -1.26
SNX1-212ENST00000560861 M0R378 163 aa7.17□□□□□ -1.26
SNX1-212ENST00000560861 CHTF8P0CG12 524 aa7.17□□□□□ -1.26
SNX1-212ENST00000560861 KRTAP10-2P60368 255 aa7.17□□□□□ -1.26
SNX1-212ENST00000560861 SMIM11BQ8TCY0 68 aa7.17□□□□□ -1.26
SNX1-212ENST00000560861 TMEM126AQ9H061 195 aa7.17□□□□□ -1.26
SNX1-212ENST00000560861 TRBV10-3A0A0K0K1G6 114 aa7.16□□□□□ -1.26
SNX1-212ENST00000560861 A0A1W2PNN7 141 aa7.16□□□□□ -1.26
SNX1-212ENST00000560861 C7orf33Q8WU49 177 aa7.16□□□□□ -1.26
SNX1-212ENST00000560861 IGLV5-52A0A0A0MRZ9 124 aa7.15□□□□□ -1.26
SNX1-212ENST00000560861 IGKV2-24A0A0C4DH68 120 aa7.15□□□□□ -1.26
SNX1-212ENST00000560861 K7EP34 96 aa7.15□□□□□ -1.26
SNX1-212ENST00000560861 FABP2P12104 132 aa7.15□□□□□ -1.26
SNX1-212ENST00000560861 Q1RN00 199 aa7.15□□□□□ -1.26
SNX1-212ENST00000560861 OR13C6PQ8NH95 151 aa7.15□□□□□ -1.26
SNX1-212ENST00000560861 SPACA4Q8TDM5 124 aa7.14□□□□□ -1.27
SNX1-212ENST00000560861 C22orf24Q9Y442 160 aa7.14□□□□□ -1.27
SNX1-212ENST00000560861 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.14□□□□□ -1.27
SNX1-212ENST00000560861 PSMB2P49721 201 aa7.13□□□□□ -1.27
SNX1-212ENST00000560861 VAMP3Q15836 100 aa7.13□□□□□ -1.27
SNX1-212ENST00000560861 S100A7L2Q5SY68 101 aa7.13□□□□□ -1.27
SNX1-212ENST00000560861 LINC00336Q6ZUF6 198 aa7.13□□□□□ -1.27
SNX1-212ENST00000560861 FAM19A5Q7Z5A7 132 aaPredicted RBP7.13□□□□□ -1.27
SNX1-212ENST00000560861 SPCS1Q9Y6A9 102 aa7.13□□□□□ -1.27
SNX1-212ENST00000560861 TCL1BO95988 128 aa7.12□□□□□ -1.27
SNX1-212ENST00000560861 NKAPP1Q8N9T2 125 aa7.12□□□□□ -1.27
SNX1-212ENST00000560861 LINC00167Q96N53 147 aa7.12□□□□□ -1.27
SNX1-212ENST00000560861 LINC00474Q9P2X8 69 aa7.12□□□□□ -1.27
SNX1-212ENST00000560861 HERC2O95714 4834 aa7.12□□□□□ -1.27
SNX1-212ENST00000560861 IGLV1-50A0A075B6I6 118 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms