RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 K7ERJ3 54 aa6.11□□□□□ -1.43
TPM1-225ENST00000560679 CCL25O15444 150 aa6.11□□□□□ -1.43
TPM1-225ENST00000560679 AMMECR1LQ6DCA0 310 aa6.11□□□□□ -1.43
TPM1-225ENST00000560679 FAM19A3Q7Z5A8 133 aa6.11□□□□□ -1.43
TPM1-225ENST00000560679 RAB37Q96AX2 223 aa6.11□□□□□ -1.43
TPM1-225ENST00000560679 GEMIN7Q9H840 131 aaKnown RBP6.11□□□□□ -1.43
TPM1-225ENST00000560679 IGLV4-60A0A075B6I1 120 aa6.1□□□□□ -1.43
TPM1-225ENST00000560679 IGHV1-58A0A0C4DH39 117 aa6.1□□□□□ -1.43
TPM1-225ENST00000560679 H3BUT2 72 aa6.1□□□□□ -1.43
TPM1-225ENST00000560679 UBE2L6O14933 153 aa6.1□□□□□ -1.43
TPM1-225ENST00000560679 TMEM101Q96IK0 257 aa6.1□□□□□ -1.43
TPM1-225ENST00000560679 TRAV8-4A0A0B4J246 113 aa6.09□□□□□ -1.43
TPM1-225ENST00000560679 A0A1W2PPM0 123 aa6.09□□□□□ -1.43
TPM1-225ENST00000560679 K7EP34 96 aa6.09□□□□□ -1.43
TPM1-225ENST00000560679 HERVK_113P63121 156 aa6.09□□□□□ -1.43
TPM1-225ENST00000560679 CDC42SE2Q9NRR3 84 aa6.09□□□□□ -1.43
TPM1-225ENST00000560679 TMEM238C9JI98 176 aa6.08□□□□□ -1.44
TPM1-225ENST00000560679 SPINK8P0C7L1 97 aa6.08□□□□□ -1.44
TPM1-225ENST00000560679 FABP2P12104 132 aa6.08□□□□□ -1.44
TPM1-225ENST00000560679 HIGD2BQ4VC39 106 aa6.08□□□□□ -1.44
TPM1-225ENST00000560679 GTF2H5Q6ZYL4 71 aa6.08□□□□□ -1.44
TPM1-225ENST00000560679 NAA38Q9BRA0 125 aaKnown RBP6.08□□□□□ -1.44
TPM1-225ENST00000560679 IGLV5-39A0A0G2JS06 123 aa6.07□□□□□ -1.44
TPM1-225ENST00000560679 A0A0J9YXY3 114 aa6.07□□□□□ -1.44
TPM1-225ENST00000560679 A0A0U1RQV1 116 aa6.07□□□□□ -1.44
TPM1-225ENST00000560679 GAGE10A6NGK3 116 aa6.07□□□□□ -1.44
TPM1-225ENST00000560679 LINC00242Q5T6M2 205 aa6.07□□□□□ -1.44
TPM1-225ENST00000560679 Q6ZRP5 223 aa6.07□□□□□ -1.44
TPM1-225ENST00000560679 CDKN2A-AS1Q9UH64 79 aa6.07□□□□□ -1.44
TPM1-225ENST00000560679 NDUFA12Q9UI09 145 aa6.07□□□□□ -1.44
TPM1-225ENST00000560679 MUC17Q685J3 4493 aa6.06□□□□□ -1.44
TPM1-225ENST00000560679 TRAV13-1A0A0B4J241 112 aa6.06□□□□□ -1.44
TPM1-225ENST00000560679 SPCS1Q9Y6A9 102 aa6.06□□□□□ -1.44
TPM1-225ENST00000560679 GVQW2A0A096LPI5 108 aaPredicted RBP6.05□□□□□ -1.44
TPM1-225ENST00000560679 A0A1B0GUV1 79 aa6.05□□□□□ -1.44
TPM1-225ENST00000560679 GAGE12HA6NDE8 117 aa6.05□□□□□ -1.44
TPM1-225ENST00000560679 SMIM1B2RUZ4 78 aa6.05□□□□□ -1.44
TPM1-225ENST00000560679 NDUFA1O15239 70 aa6.05□□□□□ -1.44
TPM1-225ENST00000560679 TIMM17BO60830 172 aa6.05□□□□□ -1.44
TPM1-225ENST00000560679 PRR26Q8N8Z3 221 aa6.04□□□□□ -1.44
TPM1-225ENST00000560679 LITAFQ99732 161 aa6.04□□□□□ -1.44
TPM1-225ENST00000560679 SPANXDQ9BXN6 97 aa6.04□□□□□ -1.44
TPM1-225ENST00000560679 SPANXCQ9NY87 97 aa6.04□□□□□ -1.44
TPM1-225ENST00000560679 RPL24P83731 157 aaKnown RBP6.03□□□□□ -1.44
TPM1-225ENST00000560679 PSORS1C2Q9UIG4 136 aa6.03□□□□□ -1.44
TPM1-225ENST00000560679 A0A0B4J2C4 111 aa6.02□□□□□ -1.45
TPM1-225ENST00000560679 A4D1N5 150 aa6.02□□□□□ -1.45
TPM1-225ENST00000560679 APOMO95445 188 aa6.02□□□□□ -1.45
TPM1-225ENST00000560679 TSPAN13O95857 204 aa6.02□□□□□ -1.45
TPM1-225ENST00000560679 CFC1BP0CG36 223 aa6.02□□□□□ -1.45
TPM1-225ENST00000560679 CFC1P0CG37 223 aa6.02□□□□□ -1.45
TPM1-225ENST00000560679 CFAP161Q6P656 301 aa6.02□□□□□ -1.45
TPM1-225ENST00000560679 MUSTN1Q8IVN3 82 aa6.02□□□□□ -1.45
TPM1-225ENST00000560679 LINC00474Q9P2X8 69 aa6.02□□□□□ -1.45
TPM1-225ENST00000560679 IFITM1P13164 125 aa6.01□□□□□ -1.45
TPM1-225ENST00000560679 LYRM7Q5U5X0 104 aa6.01□□□□□ -1.45
TPM1-225ENST00000560679 LINC00526Q96FQ7 95 aa6.01□□□□□ -1.45
TPM1-225ENST00000560679 ZNF625Q96I27 306 aaPredicted RBP6.01□□□□□ -1.45
TPM1-225ENST00000560679 PRO1854Q9UHT4 67 aa6.01□□□□□ -1.45
TPM1-225ENST00000560679 IGKV3OR2-268A0A0C4DH90 116 aa6□□□□□ -1.45
TPM1-225ENST00000560679 HERV-K104P63124 156 aa6□□□□□ -1.45
TPM1-225ENST00000560679 FOXI1Q12951 378 aa6□□□□□ -1.45
TPM1-225ENST00000560679 PRR4Q16378 134 aa6□□□□□ -1.45
TPM1-225ENST00000560679 ADAMTSL4-AS1Q5T5F5 129 aa6□□□□□ -1.45
TPM1-225ENST00000560679 CHCHD10Q8WYQ3 142 aaPredicted RBP6□□□□□ -1.45
TPM1-225ENST00000560679 LINC00959A0A1B0GUT2 108 aa5.99□□□□□ -1.45
TPM1-225ENST00000560679 A0A1W2PNN7 141 aa5.99□□□□□ -1.45
TPM1-225ENST00000560679 EIF4EBP3O60516 100 aaPredicted RBP5.99□□□□□ -1.45
TPM1-225ENST00000560679 COX7B2Q8TF08 81 aa5.99□□□□□ -1.45
TPM1-225ENST00000560679 CARD19Q96LW7 228 aa5.99□□□□□ -1.45
TPM1-225ENST00000560679 A0A087WZ39 114 aa5.98□□□□□ -1.45
TPM1-225ENST00000560679 IGHV3OR16-9A0A0B4J2B5 98 aa5.98□□□□□ -1.45
TPM1-225ENST00000560679 PRSS2P07478 247 aa5.98□□□□□ -1.45
TPM1-225ENST00000560679 SS18Q15532 418 aa5.98□□□□□ -1.45
TPM1-225ENST00000560679 COPS9Q8WXC6 57 aa5.98□□□□□ -1.45
TPM1-225ENST00000560679 LOC107984156A0A0G2JMH3 177 aa5.97□□□□□ -1.45
TPM1-225ENST00000560679 KRTAP1-4P0C5Y4 121 aa5.97□□□□□ -1.45
TPM1-225ENST00000560679 MEIG1Q5JSS6 88 aa5.97□□□□□ -1.45
TPM1-225ENST00000560679 ARL17AQ8IVW1 177 aa5.97□□□□□ -1.45
TPM1-225ENST00000560679 LINC01561Q8N1V8 128 aa5.97□□□□□ -1.45
TPM1-225ENST00000560679 PPDPFQ9H3Y8 114 aa5.97□□□□□ -1.45
TPM1-225ENST00000560679 ERG28Q9UKR5 140 aa5.97□□□□□ -1.45
TPM1-225ENST00000560679 PKIGQ9Y2B9 76 aa5.97□□□□□ -1.45
TPM1-225ENST00000560679 OCIAD2Q56VL3 154 aa5.96□□□□□ -1.46
TPM1-225ENST00000560679 C1orf137Q5JT78 98 aa5.96□□□□□ -1.46
TPM1-225ENST00000560679 SFTA2Q6UW10 78 aa5.96□□□□□ -1.46
TPM1-225ENST00000560679 LINC00308Q8TCZ7 52 aa5.96□□□□□ -1.46
TPM1-225ENST00000560679 TRBV20-1A0A075B6N2 111 aa5.95□□□□□ -1.46
TPM1-225ENST00000560679 F8W1H4 67 aa5.95□□□□□ -1.46
TPM1-225ENST00000560679 H0Y9J4 135 aa5.95□□□□□ -1.46
TPM1-225ENST00000560679 H3BMG7 143 aa5.95□□□□□ -1.46
TPM1-225ENST00000560679 XCL1P47992 114 aa5.95□□□□□ -1.46
TPM1-225ENST00000560679 NPC2P61916 151 aa5.95□□□□□ -1.46
TPM1-225ENST00000560679 Q1RN00 199 aa5.95□□□□□ -1.46
TPM1-225ENST00000560679 PHF5AQ7RTV0 110 aaKnown RBP5.95□□□□□ -1.46
TPM1-225ENST00000560679 C5orf38Q86SI9 138 aa5.95□□□□□ -1.46
TPM1-225ENST00000560679 DAND5Q8N907 189 aa5.95□□□□□ -1.46
TPM1-225ENST00000560679 TOMM7Q9P0U1 55 aa5.95□□□□□ -1.46
TPM1-225ENST00000560679 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
TPM1-225ENST00000560679 IGLV1-50A0A075B6I6 118 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms