RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 MRPL55Q7Z7F7 128 aaKnown RBP8.87□□□□□ -0.99
IDH3A-219ENST00000560414 PRR26Q8N8Z3 221 aa8.87□□□□□ -0.99
IDH3A-219ENST00000560414 PFN2P35080 140 aa8.86□□□□□ -0.99
IDH3A-219ENST00000560414 TMEM170BQ5T4T1 132 aa8.86□□□□□ -0.99
IDH3A-219ENST00000560414 TP73-AS1Q9UF72 201 aa8.86□□□□□ -0.99
IDH3A-219ENST00000560414 GAGE10A6NGK3 116 aa8.85□□□□□ -0.99
IDH3A-219ENST00000560414 RPL37AP8A6NKH3 93 aa8.85□□□□□ -0.99
IDH3A-219ENST00000560414 KRTAP1-4P0C5Y4 121 aa8.85□□□□□ -0.99
IDH3A-219ENST00000560414 SLC7A5P1Q8MH63 180 aa8.85□□□□□ -0.99
IDH3A-219ENST00000560414 CHCHD1Q96BP2 118 aaKnown RBP8.85□□□□□ -0.99
IDH3A-219ENST00000560414 LINC00167Q96N53 147 aa8.85□□□□□ -0.99
IDH3A-219ENST00000560414 KRTAP9-3Q9BYQ3 159 aa8.85□□□□□ -0.99
IDH3A-219ENST00000560414 CHTOPQ9Y3Y2 248 aaKnown RBP8.85□□□□□ -0.99
IDH3A-219ENST00000560414 LRP2P98164 4655 aa8.84□□□□□ -0.99
IDH3A-219ENST00000560414 NUPR1O60356 82 aa8.84□□□□□ -0.99
IDH3A-219ENST00000560414 ZNF625Q96I27 306 aaPredicted RBP8.84□□□□□ -0.99
IDH3A-219ENST00000560414 ZNF861PO60384 105 aa8.83□□□□□ -1
IDH3A-219ENST00000560414 SCO1O75880 301 aa8.83□□□□□ -1
IDH3A-219ENST00000560414 FAM19A2Q8N3H0 131 aa8.83□□□□□ -1
IDH3A-219ENST00000560414 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
IDH3A-219ENST00000560414 TRGC2P03986 189 aa8.82□□□□□ -1
IDH3A-219ENST00000560414 ERG28Q9UKR5 140 aa8.82□□□□□ -1
IDH3A-219ENST00000560414 IGLV5-37A0A075B6J1 123 aa8.81□□□□□ -1
IDH3A-219ENST00000560414 NKAPP1Q8N9T2 125 aa8.81□□□□□ -1
IDH3A-219ENST00000560414 SND1-IT1Q9HBX3 110 aa8.81□□□□□ -1
IDH3A-219ENST00000560414 TRAV12-1A0A0B4J245 112 aa8.8□□□□□ -1
IDH3A-219ENST00000560414 BCE1O60756 84 aa8.8□□□□□ -1
IDH3A-219ENST00000560414 HSBP1O75506 76 aa8.8□□□□□ -1
IDH3A-219ENST00000560414 IGLV1-50A0A075B6I6 118 aa8.79□□□□□ -1
IDH3A-219ENST00000560414 TMEM223A0PJW6 202 aa8.79□□□□□ -1
IDH3A-219ENST00000560414 COX17Q14061 63 aa8.78□□□□□ -1
IDH3A-219ENST00000560414 IGKV2-28A0A075B6P5 120 aa8.77□□□□□ -1.01
IDH3A-219ENST00000560414 H0Y8G0 127 aa8.77□□□□□ -1.01
IDH3A-219ENST00000560414 IGKV2D-28P01615 120 aa8.77□□□□□ -1.01
IDH3A-219ENST00000560414 VPREB1P12018 145 aa8.77□□□□□ -1.01
IDH3A-219ENST00000560414 RPL28P46779 137 aaKnown RBP8.77□□□□□ -1.01
IDH3A-219ENST00000560414 Q8NDZ9 215 aa8.77□□□□□ -1.01
IDH3A-219ENST00000560414 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
IDH3A-219ENST00000560414 SERF1AO75920 110 aa8.76□□□□□ -1.01
IDH3A-219ENST00000560414 LINC00158P58513 81 aa8.75□□□□□ -1.01
IDH3A-219ENST00000560414 SFTA2Q6UW10 78 aa8.75□□□□□ -1.01
IDH3A-219ENST00000560414 COLCA2A8K830 154 aa8.74□□□□□ -1.01
IDH3A-219ENST00000560414 LEPROTL1O95214 131 aa8.74□□□□□ -1.01
IDH3A-219ENST00000560414 RPL13AP40429 203 aaKnown RBP8.73□□□□□ -1.01
IDH3A-219ENST00000560414 UBE2AP49459 152 aa8.73□□□□□ -1.01
IDH3A-219ENST00000560414 RPL24P83731 157 aaKnown RBP8.73□□□□□ -1.01
IDH3A-219ENST00000560414 KRTAP13-1Q8IUC0 172 aa8.73□□□□□ -1.01
IDH3A-219ENST00000560414 TMEM238C9JI98 176 aa8.72□□□□□ -1.01
IDH3A-219ENST00000560414 SMIM13P0DJ93 91 aa8.72□□□□□ -1.01
IDH3A-219ENST00000560414 ANAPC11Q9NYG5 84 aa8.72□□□□□ -1.01
IDH3A-219ENST00000560414 A0A087X002 238 aa8.71□□□□□ -1.02
IDH3A-219ENST00000560414 FABP4P15090 132 aa8.71□□□□□ -1.02
IDH3A-219ENST00000560414 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
IDH3A-219ENST00000560414 PRLHP81277 87 aa8.7□□□□□ -1.02
IDH3A-219ENST00000560414 MEIG1Q5JSS6 88 aa8.7□□□□□ -1.02
IDH3A-219ENST00000560414 LPAP08519 4548 aa8.7□□□□□ -1.02
IDH3A-219ENST00000560414 M0R378 163 aa8.69□□□□□ -1.02
IDH3A-219ENST00000560414 ATP6V1G1O75348 118 aa8.69□□□□□ -1.02
IDH3A-219ENST00000560414 LCE5AQ5TCM9 118 aa8.69□□□□□ -1.02
IDH3A-219ENST00000560414 FAM19A1Q7Z5A9 133 aa8.69□□□□□ -1.02
IDH3A-219ENST00000560414 PMCHL2Q9BQD1 86 aa8.69□□□□□ -1.02
IDH3A-219ENST00000560414 NDUFA12Q9UI09 145 aa8.69□□□□□ -1.02
IDH3A-219ENST00000560414 TSPEAR-AS2P59090 65 aa8.68□□□□□ -1.02
IDH3A-219ENST00000560414 MIR7-3HGQ8N6C7 128 aa8.68□□□□□ -1.02
IDH3A-219ENST00000560414 HSPB8Q9UJY1 196 aa8.68□□□□□ -1.02
IDH3A-219ENST00000560414 CRYGAP11844 174 aa8.67□□□□□ -1.02
IDH3A-219ENST00000560414 HERV-K104P63124 156 aa8.67□□□□□ -1.02
IDH3A-219ENST00000560414 BOD1L2Q8IYS8 172 aa8.67□□□□□ -1.02
IDH3A-219ENST00000560414 RNF213Q63HN8 5207 aa8.66□□□□□ -1.02
IDH3A-219ENST00000560414 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
IDH3A-219ENST00000560414 LEPROTO15243 131 aa8.66□□□□□ -1.02
IDH3A-219ENST00000560414 DPM2O94777 84 aa8.65□□□□□ -1.02
IDH3A-219ENST00000560414 TSPAN13O95857 204 aa8.65□□□□□ -1.02
IDH3A-219ENST00000560414 PLNP26678 52 aa8.65□□□□□ -1.02
IDH3A-219ENST00000560414 TYMSOSQ8TAI1 123 aa8.65□□□□□ -1.02
IDH3A-219ENST00000560414 NCR3O14931 201 aa8.64□□□□□ -1.03
IDH3A-219ENST00000560414 KRTAP13-2Q52LG2 175 aa8.64□□□□□ -1.03
IDH3A-219ENST00000560414 PLEKHB2Q96CS7 222 aa8.64□□□□□ -1.03
IDH3A-219ENST00000560414 LINC00587B1AMM8 73 aa8.63□□□□□ -1.03
IDH3A-219ENST00000560414 J3QQQ9 107 aa8.63□□□□□ -1.03
IDH3A-219ENST00000560414 IGKCP01834 107 aa8.63□□□□□ -1.03
IDH3A-219ENST00000560414 DAND5Q8N907 189 aa8.63□□□□□ -1.03
IDH3A-219ENST00000560414 KRTAP4-7Q9BYR0 210 aa8.63□□□□□ -1.03
IDH3A-219ENST00000560414 HIST1H2BKO60814 126 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HIST1H2BJP06899 126 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HIST1H2BOP23527 126 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HIST1H2BBP33778 126 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HIST1H2BDP58876 126 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HIST1H2BCP62807 126 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 PRR4Q16378 134 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HIST2H2BEQ16778 126 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HIST1H2BHQ93079 126 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HIST1H2BNQ99877 126 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HIST1H2BMQ99879 126 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HIGD2AQ9BW72 106 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 MAP1LC3CQ9BXW4 147 aa8.62□□□□□ -1.03
IDH3A-219ENST00000560414 HERVK_113P61574 105 aa8.61□□□□□ -1.03
IDH3A-219ENST00000560414 LGALS3P17931 250 aaKnown RBP8.6□□□□□ -1.03
IDH3A-219ENST00000560414 FAM229BQ4G0N7 80 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms