RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 CEND1Q8N111 149 aa13.33□□□□□ -0.28
PSEN1-225ENST00000560005 MEIG1Q5JSS6 88 aa13.32□□□□□ -0.28
PSEN1-225ENST00000560005 TMEM238LA0A1B0GVL6 79 aa13.31□□□□□ -0.28
PSEN1-225ENST00000560005 A6NDN8 102 aa13.31□□□□□ -0.28
PSEN1-225ENST00000560005 A6NJY4 79 aa13.31□□□□□ -0.28
PSEN1-225ENST00000560005 IFITM1P13164 125 aa13.31□□□□□ -0.28
PSEN1-225ENST00000560005 SPAG11BQ08648 103 aa13.31□□□□□ -0.28
PSEN1-225ENST00000560005 KIAA0087Q14695 138 aa13.31□□□□□ -0.28
PSEN1-225ENST00000560005 BATFQ16520 125 aa13.31□□□□□ -0.28
PSEN1-225ENST00000560005 SPANXDQ9BXN6 97 aa13.31□□□□□ -0.28
PSEN1-225ENST00000560005 SPANXCQ9NY87 97 aa13.31□□□□□ -0.28
PSEN1-225ENST00000560005 LRP2P98164 4655 aa13.3□□□□□ -0.28
PSEN1-225ENST00000560005 PTTG1IPP53801 180 aa13.3□□□□□ -0.28
PSEN1-225ENST00000560005 COL5A1-AS1Q5SY13 56 aa13.3□□□□□ -0.28
PSEN1-225ENST00000560005 ZNF561-AS1K7EIQ3 104 aa13.29□□□□□ -0.28
PSEN1-225ENST00000560005 CIRBP-AS1Q8TBR5 109 aa13.29□□□□□ -0.28
PSEN1-225ENST00000560005 RPL24P83731 157 aaKnown RBP13.28□□□□□ -0.28
PSEN1-225ENST00000560005 COX17Q14061 63 aa13.28□□□□□ -0.28
PSEN1-225ENST00000560005 C2orf48Q96LS8 159 aa13.27□□□□□ -0.29
PSEN1-225ENST00000560005 PPDPFQ9H3Y8 114 aa13.27□□□□□ -0.29
PSEN1-225ENST00000560005 LITAFQ99732 161 aa13.26□□□□□ -0.29
PSEN1-225ENST00000560005 GVQW2A0A096LPI5 108 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-225ENST00000560005 ERG28Q9UKR5 140 aa13.24□□□□□ -0.29
PSEN1-225ENST00000560005 SMIM13P0DJ93 91 aa13.23□□□□□ -0.29
PSEN1-225ENST00000560005 LINC00158P58513 81 aa13.23□□□□□ -0.29
PSEN1-225ENST00000560005 ADAMTSL4-AS1Q5T5F5 129 aa13.23□□□□□ -0.29
PSEN1-225ENST00000560005 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-225ENST00000560005 TRBV30A0A0K0K1B3 111 aa13.22□□□□□ -0.29
PSEN1-225ENST00000560005 FXYD2P54710 66 aa13.22□□□□□ -0.29
PSEN1-225ENST00000560005 MUSTN1Q8IVN3 82 aa13.22□□□□□ -0.29
PSEN1-225ENST00000560005 RPL37AP61513 92 aaKnown RBP13.21□□□□□ -0.29
PSEN1-225ENST00000560005 C2orf82Q6UX34 121 aa13.21□□□□□ -0.29
PSEN1-225ENST00000560005 C15orf56Q8N910 161 aa13.21□□□□□ -0.29
PSEN1-225ENST00000560005 CAMK2N2Q96S95 79 aa13.21□□□□□ -0.29
PSEN1-225ENST00000560005 TNXBP22105 4242 aa13.2□□□□□ -0.3
PSEN1-225ENST00000560005 C14orf177Q52M58 125 aa13.19□□□□□ -0.3
PSEN1-225ENST00000560005 MT1HL1P0DM35 61 aa13.18□□□□□ -0.3
PSEN1-225ENST00000560005 HIGD2BQ4VC39 106 aa13.18□□□□□ -0.3
PSEN1-225ENST00000560005 UNQ6190/PRO20217Q6UXQ8 127 aa13.18□□□□□ -0.3
PSEN1-225ENST00000560005 LINC00308Q8TCZ7 52 aa13.18□□□□□ -0.3
PSEN1-225ENST00000560005 A0A0U1RRA0 63 aa13.17□□□□□ -0.3
PSEN1-225ENST00000560005 USP17L23D6RBM5 183 aa13.17□□□□□ -0.3
PSEN1-225ENST00000560005 PFN2P35080 140 aa13.17□□□□□ -0.3
PSEN1-225ENST00000560005 MIR7-3HGQ8N6C7 128 aa13.17□□□□□ -0.3
PSEN1-225ENST00000560005 NHP2Q9NX24 153 aaKnown RBP13.17□□□□□ -0.3
PSEN1-225ENST00000560005 A0A1B0GWB2 263 aa13.16□□□□□ -0.3
PSEN1-225ENST00000560005 RNF151Q2KHN1 245 aa13.16□□□□□ -0.3
PSEN1-225ENST00000560005 A4D1N5 150 aa13.15□□□□□ -0.3
PSEN1-225ENST00000560005 SYCNQ0VAF6 134 aa13.15□□□□□ -0.3
PSEN1-225ENST00000560005 LOC107984156A0A0G2JMH3 177 aa13.13□□□□□ -0.31
PSEN1-225ENST00000560005 ARL17AQ8IVW1 177 aa13.13□□□□□ -0.31
PSEN1-225ENST00000560005 DAND5Q8N907 189 aa13.13□□□□□ -0.31
PSEN1-225ENST00000560005 LINC00526Q96FQ7 95 aa13.13□□□□□ -0.31
PSEN1-225ENST00000560005 A0A0B4J2C4 111 aa13.12□□□□□ -0.31
PSEN1-225ENST00000560005 C10orf25Q5T742 122 aa13.12□□□□□ -0.31
PSEN1-225ENST00000560005 RAB37Q96AX2 223 aa13.12□□□□□ -0.31
PSEN1-225ENST00000560005 C6orf48Q9UBA6 75 aa13.11□□□□□ -0.31
PSEN1-225ENST00000560005 CFC1BP0CG36 223 aa13.1□□□□□ -0.31
PSEN1-225ENST00000560005 CFC1P0CG37 223 aa13.1□□□□□ -0.31
PSEN1-225ENST00000560005 NPC2P61916 151 aa13.1□□□□□ -0.31
PSEN1-225ENST00000560005 Q6ZRU5 148 aa13.1□□□□□ -0.31
PSEN1-225ENST00000560005 CARD19Q96LW7 228 aa13.1□□□□□ -0.31
PSEN1-225ENST00000560005 PRO1854Q9UHT4 67 aa13.1□□□□□ -0.31
PSEN1-225ENST00000560005 TAX1BP3O14907 124 aa13.09□□□□□ -0.31
PSEN1-225ENST00000560005 C9orf116Q5BN46 136 aaPredicted RBP13.08□□□□□ -0.32
PSEN1-225ENST00000560005 SND1-IT1Q9HBX3 110 aa13.08□□□□□ -0.32
PSEN1-225ENST00000560005 C9orf118A6NHY6 69 aa13.07□□□□□ -0.32
PSEN1-225ENST00000560005 NDUFC2-KCTD14E9PQ53 114 aa13.06□□□□□ -0.32
PSEN1-225ENST00000560005 SOSTDC1Q6X4U4 206 aa13.06□□□□□ -0.32
PSEN1-225ENST00000560005 PKIGQ9Y2B9 76 aa13.06□□□□□ -0.32
PSEN1-225ENST00000560005 NDUFC2O95298 119 aa13.05□□□□□ -0.32
PSEN1-225ENST00000560005 TLX1NBP0CAT3 122 aa13.05□□□□□ -0.32
PSEN1-225ENST00000560005 TRAV13-2A0A0B4J235 113 aa13.04□□□□□ -0.32
PSEN1-225ENST00000560005 K7ERJ3 54 aa13.03□□□□□ -0.32
PSEN1-225ENST00000560005 CNBPP62633 177 aaKnown RBP13.03□□□□□ -0.32
PSEN1-225ENST00000560005 EIF4EBP3O60516 100 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-225ENST00000560005 LYRM7Q5U5X0 104 aa13□□□□□ -0.33
PSEN1-225ENST00000560005 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13□□□□□ -0.33
PSEN1-225ENST00000560005 LOC107984640A0A0U1RRK4 108 aa12.99□□□□□ -0.33
PSEN1-225ENST00000560005 H3BUT2 72 aa12.98□□□□□ -0.33
PSEN1-225ENST00000560005 SLPIP03973 132 aa12.98□□□□□ -0.33
PSEN1-225ENST00000560005 A0A1B0GV90 55 aa12.97□□□□□ -0.33
PSEN1-225ENST00000560005 PANO1I0J062 215 aa12.97□□□□□ -0.33
PSEN1-225ENST00000560005 FABP2P12104 132 aa12.97□□□□□ -0.33
PSEN1-225ENST00000560005 Q1RN00 199 aa12.97□□□□□ -0.33
PSEN1-225ENST00000560005 TRBV10-2A0A0K0K1G8 114 aa12.95□□□□□ -0.34
PSEN1-225ENST00000560005 A0A1W2PPM0 123 aa12.95□□□□□ -0.34
PSEN1-225ENST00000560005 TSPAN13O95857 204 aa12.95□□□□□ -0.34
PSEN1-225ENST00000560005 RPL13AP40429 203 aaKnown RBP12.95□□□□□ -0.34
PSEN1-225ENST00000560005 COX6CP09669 75 aa12.94□□□□□ -0.34
PSEN1-225ENST00000560005 VAMP3Q15836 100 aa12.94□□□□□ -0.34
PSEN1-225ENST00000560005 GAGE2EQ4V326 116 aa12.94□□□□□ -0.34
PSEN1-225ENST00000560005 GAGE2DQ9UEU5 116 aa12.94□□□□□ -0.34
PSEN1-225ENST00000560005 PSMB2P49721 201 aa12.93□□□□□ -0.34
PSEN1-225ENST00000560005 RPL18AQ02543 176 aaKnown RBP12.93□□□□□ -0.34
PSEN1-225ENST00000560005 Q6ZRP5 223 aa12.93□□□□□ -0.34
PSEN1-225ENST00000560005 C9orf163Q8N9P6 203 aa12.93□□□□□ -0.34
PSEN1-225ENST00000560005 IGKV2-28A0A075B6P5 120 aa12.92□□□□□ -0.34
PSEN1-225ENST00000560005 IGKV2D-28P01615 120 aa12.92□□□□□ -0.34
PSEN1-225ENST00000560005 TMEM126AQ9H061 195 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms