RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 CST9LQ9H4G1 147 aa6.13□□□□□ -1.43
TRAF3-207ENST00000559734 SMCO4Q9NRQ5 59 aa6.13□□□□□ -1.43
TRAF3-207ENST00000559734 PMVKQ15126 192 aa6.12□□□□□ -1.43
TRAF3-207ENST00000559734 KRTAP13-3Q3SY46 172 aa6.12□□□□□ -1.43
TRAF3-207ENST00000559734 FP248Q71RG6 208 aaPredicted RBP6.12□□□□□ -1.43
TRAF3-207ENST00000559734 IGKV2-28A0A075B6P5 120 aa6.11□□□□□ -1.43
TRAF3-207ENST00000559734 A0A096LNJ9 63 aa6.11□□□□□ -1.43
TRAF3-207ENST00000559734 IGKV2D-28P01615 120 aa6.11□□□□□ -1.43
TRAF3-207ENST00000559734 CTAG1AP78358 180 aa6.11□□□□□ -1.43
TRAF3-207ENST00000559734 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
TRAF3-207ENST00000559734 COX7B2Q8TF08 81 aa6.11□□□□□ -1.43
TRAF3-207ENST00000559734 TRAPPC1Q9Y5R8 145 aa6.11□□□□□ -1.43
TRAF3-207ENST00000559734 SCO1O75880 301 aa6.1□□□□□ -1.43
TRAF3-207ENST00000559734 SPINK8P0C7L1 97 aa6.1□□□□□ -1.43
TRAF3-207ENST00000559734 FAM19A1Q7Z5A9 133 aa6.1□□□□□ -1.43
TRAF3-207ENST00000559734 C18orf32Q8TCD1 76 aa6.1□□□□□ -1.43
TRAF3-207ENST00000559734 URB1-AS1Q96HZ7 61 aa6.1□□□□□ -1.43
TRAF3-207ENST00000559734 APOC3P02656 99 aa6.09□□□□□ -1.43
TRAF3-207ENST00000559734 LINC00614P0C842 121 aa6.09□□□□□ -1.43
TRAF3-207ENST00000559734 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.43
TRAF3-207ENST00000559734 H3BRM9 83 aa6.08□□□□□ -1.44
TRAF3-207ENST00000559734 HBDP02042 147 aa6.08□□□□□ -1.44
TRAF3-207ENST00000559734 IGLC3P0DOY3 106 aa6.08□□□□□ -1.44
TRAF3-207ENST00000559734 SNAPINO95295 136 aa6.07□□□□□ -1.44
TRAF3-207ENST00000559734 NDUFA6P56556 154 aa6.07□□□□□ -1.44
TRAF3-207ENST00000559734 RAB5BP61020 215 aa6.07□□□□□ -1.44
TRAF3-207ENST00000559734 PMCHL1Q16048 86 aa6.07□□□□□ -1.44
TRAF3-207ENST00000559734 NDUFA5Q16718 116 aa6.07□□□□□ -1.44
TRAF3-207ENST00000559734 SVBPQ8N300 66 aa6.07□□□□□ -1.44
TRAF3-207ENST00000559734 IGLV5-39A0A0G2JS06 123 aa6.06□□□□□ -1.44
TRAF3-207ENST00000559734 TMEM238C9JI98 176 aa6.06□□□□□ -1.44
TRAF3-207ENST00000559734 ATP5LO75964 103 aa6.06□□□□□ -1.44
TRAF3-207ENST00000559734 ZNF22P17026 224 aaPredicted RBP6.06□□□□□ -1.44
TRAF3-207ENST00000559734 DAND5Q8N907 189 aa6.06□□□□□ -1.44
TRAF3-207ENST00000559734 IGLV5-37A0A075B6J1 123 aa6.05□□□□□ -1.44
TRAF3-207ENST00000559734 CFC1BP0CG36 223 aa6.05□□□□□ -1.44
TRAF3-207ENST00000559734 CBLN2Q8IUK8 224 aa6.05□□□□□ -1.44
TRAF3-207ENST00000559734 HIGD2AQ9BW72 106 aa6.05□□□□□ -1.44
TRAF3-207ENST00000559734 MT1HP80294 61 aa6.04□□□□□ -1.44
TRAF3-207ENST00000559734 BAGE3Q86Y29 109 aa6.04□□□□□ -1.44
TRAF3-207ENST00000559734 Q8NBF4 154 aa6.04□□□□□ -1.44
TRAF3-207ENST00000559734 PLEKHB2Q96CS7 222 aa6.04□□□□□ -1.44
TRAF3-207ENST00000559734 YPEL4Q96NS1 127 aa6.04□□□□□ -1.44
TRAF3-207ENST00000559734 TMEM126AQ9H061 195 aa6.04□□□□□ -1.44
TRAF3-207ENST00000559734 C11orf86A6NJI1 115 aa6.03□□□□□ -1.44
TRAF3-207ENST00000559734 PFN2P35080 140 aa6.03□□□□□ -1.44
TRAF3-207ENST00000559734 NDUFA12Q9UI09 145 aa6.03□□□□□ -1.44
TRAF3-207ENST00000559734 ERG28Q9UKR5 140 aa6.02□□□□□ -1.45
TRAF3-207ENST00000559734 M0R378 163 aa6.01□□□□□ -1.45
TRAF3-207ENST00000559734 TMEM170BQ5T4T1 132 aa6.01□□□□□ -1.45
TRAF3-207ENST00000559734 CHCHD1Q96BP2 118 aaKnown RBP6.01□□□□□ -1.45
TRAF3-207ENST00000559734 SPRR4Q96PI1 79 aa6.01□□□□□ -1.45
TRAF3-207ENST00000559734 SND1-IT1Q9HBX3 110 aa6.01□□□□□ -1.45
TRAF3-207ENST00000559734 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
TRAF3-207ENST00000559734 VPREB1P12018 145 aa6□□□□□ -1.45
TRAF3-207ENST00000559734 COX17Q14061 63 aa6□□□□□ -1.45
TRAF3-207ENST00000559734 SFTA2Q6UW10 78 aa6□□□□□ -1.45
TRAF3-207ENST00000559734 IFI27L1Q96BM0 104 aa6□□□□□ -1.45
TRAF3-207ENST00000559734 ZNF625Q96I27 306 aaPredicted RBP6□□□□□ -1.45
TRAF3-207ENST00000559734 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
TRAF3-207ENST00000559734 CHTOPQ9Y3Y2 248 aaKnown RBP6□□□□□ -1.45
TRAF3-207ENST00000559734 TRAV12-1A0A0B4J245 112 aa5.99□□□□□ -1.45
TRAF3-207ENST00000559734 TMEM223A0PJW6 202 aa5.98□□□□□ -1.45
TRAF3-207ENST00000559734 SPINK1P00995 79 aa5.98□□□□□ -1.45
TRAF3-207ENST00000559734 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
TRAF3-207ENST00000559734 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
TRAF3-207ENST00000559734 ZNF706Q9Y5V0 76 aaPredicted RBP5.98□□□□□ -1.45
TRAF3-207ENST00000559734 M0R2T5 61 aa5.97□□□□□ -1.45
TRAF3-207ENST00000559734 RPL24P83731 157 aaKnown RBP5.97□□□□□ -1.45
TRAF3-207ENST00000559734 Q8NDZ9 215 aa5.97□□□□□ -1.45
TRAF3-207ENST00000559734 HSBP1O75506 76 aa5.96□□□□□ -1.46
TRAF3-207ENST00000559734 FAM19A2Q8N3H0 131 aa5.96□□□□□ -1.46
TRAF3-207ENST00000559734 IGLV8-61A0A075B6I0 122 aa5.95□□□□□ -1.46
TRAF3-207ENST00000559734 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
TRAF3-207ENST00000559734 TRGC2P03986 189 aa5.95□□□□□ -1.46
TRAF3-207ENST00000559734 LINC00158P58513 81 aa5.95□□□□□ -1.46
TRAF3-207ENST00000559734 IGLV9-49A0A0B4J1Y8 123 aa5.94□□□□□ -1.46
TRAF3-207ENST00000559734 A0A0U1RRA0 63 aa5.94□□□□□ -1.46
TRAF3-207ENST00000559734 LINC00310P59036 64 aa5.94□□□□□ -1.46
TRAF3-207ENST00000559734 PCOTHQ58A44 107 aa5.94□□□□□ -1.46
TRAF3-207ENST00000559734 Q8N377 158 aa5.94□□□□□ -1.46
TRAF3-207ENST00000559734 MOBPQ13875 183 aa5.93□□□□□ -1.46
TRAF3-207ENST00000559734 H0Y8G0 127 aa5.92□□□□□ -1.46
TRAF3-207ENST00000559734 SLC25A20O43772 301 aa5.92□□□□□ -1.46
TRAF3-207ENST00000559734 SERF1AO75920 110 aa5.92□□□□□ -1.46
TRAF3-207ENST00000559734 SMIM13P0DJ93 91 aa5.92□□□□□ -1.46
TRAF3-207ENST00000559734 HERV-K104P63124 156 aa5.92□□□□□ -1.46
TRAF3-207ENST00000559734 ATP6V1G1O75348 118 aa5.91□□□□□ -1.46
TRAF3-207ENST00000559734 LEPROTL1O95214 131 aa5.91□□□□□ -1.46
TRAF3-207ENST00000559734 MEIG1Q5JSS6 88 aa5.91□□□□□ -1.46
TRAF3-207ENST00000559734 GAGE2AQ6NT46 116 aa5.91□□□□□ -1.46
TRAF3-207ENST00000559734 SLC7A5P1Q8MH63 180 aa5.91□□□□□ -1.46
TRAF3-207ENST00000559734 SMCR5Q8TEV8 140 aa5.91□□□□□ -1.46
TRAF3-207ENST00000559734 MIR7-3HGQ8N6C7 128 aa5.9□□□□□ -1.46
TRAF3-207ENST00000559734 MYMXA0A1B0GTQ4 84 aa5.89□□□□□ -1.47
TRAF3-207ENST00000559734 COLCA2A8K830 154 aa5.89□□□□□ -1.47
TRAF3-207ENST00000559734 LINC00587B1AMM8 73 aa5.89□□□□□ -1.47
TRAF3-207ENST00000559734 PLNP26678 52 aa5.89□□□□□ -1.47
TRAF3-207ENST00000559734 TSPEAR-AS2P59090 65 aa5.89□□□□□ -1.47
TRAF3-207ENST00000559734 RPS29P62273 56 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms