RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 C22orf24Q9Y442 160 aa6.51□□□□□ -1.37
HERC1-204ENST00000559715 C11orf86A6NJI1 115 aa6.5□□□□□ -1.37
HERC1-204ENST00000559715 UBE2BP63146 152 aa6.5□□□□□ -1.37
HERC1-204ENST00000559715 CHTOPQ9Y3Y2 248 aaKnown RBP6.5□□□□□ -1.37
HERC1-204ENST00000559715 IGLV5-39A0A0G2JS06 123 aa6.49□□□□□ -1.37
HERC1-204ENST00000559715 TSPAN13O95857 204 aa6.49□□□□□ -1.37
HERC1-204ENST00000559715 CXCL5P42830 114 aa6.49□□□□□ -1.37
HERC1-204ENST00000559715 FABP4P15090 132 aa6.48□□□□□ -1.37
HERC1-204ENST00000559715 KRTAP13-2Q52LG2 175 aa6.48□□□□□ -1.37
HERC1-204ENST00000559715 MAP1LC3CQ9BXW4 147 aa6.48□□□□□ -1.37
HERC1-204ENST00000559715 XAGE1AQ9HD64 81 aa6.48□□□□□ -1.37
HERC1-204ENST00000559715 PRSS2P07478 247 aa6.47□□□□□ -1.37
HERC1-204ENST00000559715 PLNP26678 52 aa6.47□□□□□ -1.37
HERC1-204ENST00000559715 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
HERC1-204ENST00000559715 KRTAP13-1Q8IUC0 172 aa6.47□□□□□ -1.37
HERC1-204ENST00000559715 SYS1-DBNDD2H3BUS1 97 aa6.46□□□□□ -1.38
HERC1-204ENST00000559715 SPINK8P0C7L1 97 aa6.46□□□□□ -1.38
HERC1-204ENST00000559715 TMEM170BQ5T4T1 132 aa6.46□□□□□ -1.38
HERC1-204ENST00000559715 COX7B2Q8TF08 81 aa6.46□□□□□ -1.38
HERC1-204ENST00000559715 ANAPC11Q9NYG5 84 aa6.46□□□□□ -1.38
HERC1-204ENST00000559715 TP73-AS1Q9UF72 201 aa6.46□□□□□ -1.38
HERC1-204ENST00000559715 TMEM223A0PJW6 202 aa6.45□□□□□ -1.38
HERC1-204ENST00000559715 CKS1BP61024 79 aa6.45□□□□□ -1.38
HERC1-204ENST00000559715 C6orf226Q5I0X4 101 aa6.45□□□□□ -1.38
HERC1-204ENST00000559715 PET117Q6UWS5 81 aa6.45□□□□□ -1.38
HERC1-204ENST00000559715 TOMM7Q9P0U1 55 aa6.45□□□□□ -1.38
HERC1-204ENST00000559715 H0Y8G0 127 aa6.44□□□□□ -1.38
HERC1-204ENST00000559715 BCE1O60756 84 aa6.44□□□□□ -1.38
HERC1-204ENST00000559715 DPM2O94777 84 aa6.44□□□□□ -1.38
HERC1-204ENST00000559715 LINC01545Q5VT33 79 aa6.44□□□□□ -1.38
HERC1-204ENST00000559715 SFTA2Q6UW10 78 aa6.44□□□□□ -1.38
HERC1-204ENST00000559715 MRPL55Q7Z7F7 128 aaKnown RBP6.44□□□□□ -1.38
HERC1-204ENST00000559715 HIST3H2BBQ8N257 126 aa6.44□□□□□ -1.38
HERC1-204ENST00000559715 A0A0U1RQV1 116 aa6.43□□□□□ -1.38
HERC1-204ENST00000559715 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
HERC1-204ENST00000559715 IGKCP01834 107 aa6.43□□□□□ -1.38
HERC1-204ENST00000559715 S100A6P06703 90 aa6.43□□□□□ -1.38
HERC1-204ENST00000559715 C3orf79P0CE67 100 aa6.43□□□□□ -1.38
HERC1-204ENST00000559715 LINC00167Q96N53 147 aa6.43□□□□□ -1.38
HERC1-204ENST00000559715 CRYGAP11844 174 aa6.42□□□□□ -1.38
HERC1-204ENST00000559715 LBHQ53QV2 105 aaPredicted RBP6.42□□□□□ -1.38
HERC1-204ENST00000559715 HIST1H2BLQ99880 126 aa6.42□□□□□ -1.38
HERC1-204ENST00000559715 RETNLBQ9BQ08 111 aa6.42□□□□□ -1.38
HERC1-204ENST00000559715 RPL37AP8A6NKH3 93 aa6.41□□□□□ -1.38
HERC1-204ENST00000559715 H3BS24 57 aa6.41□□□□□ -1.38
HERC1-204ENST00000559715 RPL28P46779 137 aaKnown RBP6.41□□□□□ -1.38
HERC1-204ENST00000559715 TYMSOSQ8TAI1 123 aa6.41□□□□□ -1.38
HERC1-204ENST00000559715 ZNF625Q96I27 306 aaPredicted RBP6.41□□□□□ -1.38
HERC1-204ENST00000559715 PMCHL2Q9BQD1 86 aa6.41□□□□□ -1.38
HERC1-204ENST00000559715 IGLV5-37A0A075B6J1 123 aa6.4□□□□□ -1.38
HERC1-204ENST00000559715 C20orf202A1L168 122 aa6.4□□□□□ -1.38
HERC1-204ENST00000559715 C5orf52A6NGY3 159 aa6.4□□□□□ -1.38
HERC1-204ENST00000559715 S100A2P29034 98 aa6.4□□□□□ -1.38
HERC1-204ENST00000559715 AKR1D1P51857 326 aa6.4□□□□□ -1.38
HERC1-204ENST00000559715 KRTDAPP60985 99 aa6.4□□□□□ -1.38
HERC1-204ENST00000559715 HERVK_113P61574 105 aa6.4□□□□□ -1.38
HERC1-204ENST00000559715 TPRXLQ17RH7 258 aa6.39□□□□□ -1.39
HERC1-204ENST00000559715 PLEKHB2Q96CS7 222 aa6.39□□□□□ -1.39
HERC1-204ENST00000559715 E9PLD3 99 aa6.38□□□□□ -1.39
HERC1-204ENST00000559715 LEPROTO15243 131 aa6.38□□□□□ -1.39
HERC1-204ENST00000559715 SNRPEP62304 92 aaKnown RBP6.38□□□□□ -1.39
HERC1-204ENST00000559715 HERV-K104P63124 156 aa6.38□□□□□ -1.39
HERC1-204ENST00000559715 COX17Q14061 63 aa6.38□□□□□ -1.39
HERC1-204ENST00000559715 FAM229BQ4G0N7 80 aa6.38□□□□□ -1.39
HERC1-204ENST00000559715 TMA7Q9Y2S6 64 aaKnown RBP6.38□□□□□ -1.39
HERC1-204ENST00000559715 GAGE10A6NGK3 116 aa6.37□□□□□ -1.39
HERC1-204ENST00000559715 NMUP48645 174 aa6.37□□□□□ -1.39
HERC1-204ENST00000559715 TSPEAR-AS2P59090 65 aa6.37□□□□□ -1.39
HERC1-204ENST00000559715 ERG28Q9UKR5 140 aa6.37□□□□□ -1.39
HERC1-204ENST00000559715 J3QQQ9 107 aa6.36□□□□□ -1.39
HERC1-204ENST00000559715 LINC00304Q8N9R0 145 aa6.36□□□□□ -1.39
HERC1-204ENST00000559715 NDUFA12Q9UI09 145 aa6.36□□□□□ -1.39
HERC1-204ENST00000559715 MYMXA0A1B0GTQ4 84 aa6.35□□□□□ -1.39
HERC1-204ENST00000559715 LINC00587B1AMM8 73 aa6.35□□□□□ -1.39
HERC1-204ENST00000559715 Q8NDZ9 215 aa6.35□□□□□ -1.39
HERC1-204ENST00000559715 LGALS3P17931 250 aaKnown RBP6.34□□□□□ -1.39
HERC1-204ENST00000559715 IGLV7-46A0A075B6I9 117 aa6.33□□□□□ -1.4
HERC1-204ENST00000559715 CTAG1AP78358 180 aa6.33□□□□□ -1.4
HERC1-204ENST00000559715 KRTAP4-1Q9BYQ7 146 aa6.33□□□□□ -1.4
HERC1-204ENST00000559715 VPREB1P12018 145 aa6.32□□□□□ -1.4
HERC1-204ENST00000559715 PFN2P35080 140 aa6.32□□□□□ -1.4
HERC1-204ENST00000559715 PRLHP81277 87 aa6.32□□□□□ -1.4
HERC1-204ENST00000559715 C3orf22Q8N5N4 141 aa6.32□□□□□ -1.4
HERC1-204ENST00000559715 CDIP1Q9H305 208 aa6.32□□□□□ -1.4
HERC1-204ENST00000559715 SND1-IT1Q9HBX3 110 aa6.32□□□□□ -1.4
HERC1-204ENST00000559715 IGKV2-28A0A075B6P5 120 aa6.31□□□□□ -1.4
HERC1-204ENST00000559715 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
HERC1-204ENST00000559715 TMEM238C9JI98 176 aa6.31□□□□□ -1.4
HERC1-204ENST00000559715 IGKV2D-28P01615 120 aa6.31□□□□□ -1.4
HERC1-204ENST00000559715 UBE2AP49459 152 aa6.31□□□□□ -1.4
HERC1-204ENST00000559715 MEIG1Q5JSS6 88 aa6.31□□□□□ -1.4
HERC1-204ENST00000559715 M0R378 163 aa6.3□□□□□ -1.4
HERC1-204ENST00000559715 LINC00158P58513 81 aa6.3□□□□□ -1.4
HERC1-204ENST00000559715 ATOH7Q8N100 152 aa6.3□□□□□ -1.4
HERC1-204ENST00000559715 TMEM126AQ9H061 195 aa6.3□□□□□ -1.4
HERC1-204ENST00000559715 PPDPFQ9H3Y8 114 aa6.3□□□□□ -1.4
HERC1-204ENST00000559715 LOC107984156A0A0G2JMH3 177 aa6.29□□□□□ -1.4
HERC1-204ENST00000559715 A0A0J9YXY3 114 aa6.29□□□□□ -1.4
HERC1-204ENST00000559715 TIMM17BO60830 172 aa6.29□□□□□ -1.4
HERC1-204ENST00000559715 SMIM13P0DJ93 91 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms