RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 SMIM2Q9BVW6 85 aa4.04□□□□□ -1.76
CRNDE-207ENST00000559598 LENEPQ9Y5L5 61 aa4.04□□□□□ -1.76
CRNDE-207ENST00000559598 M0R3E3 92 aa4.03□□□□□ -1.76
CRNDE-207ENST00000559598 INSP01308 110 aa4.03□□□□□ -1.76
CRNDE-207ENST00000559598 DEFB130BP0DP73 79 aa4.03□□□□□ -1.76
CRNDE-207ENST00000559598 DEFB130AP0DP74 79 aa4.03□□□□□ -1.76
CRNDE-207ENST00000559598 FXYD7P58549 80 aa4.03□□□□□ -1.76
CRNDE-207ENST00000559598 ERCC8Q13216 396 aa4.03□□□□□ -1.76
CRNDE-207ENST00000559598 SPANXN1Q5VSR9 72 aa4.03□□□□□ -1.76
CRNDE-207ENST00000559598 MRPL53Q96EL3 112 aaKnown RBP4.03□□□□□ -1.76
CRNDE-207ENST00000559598 CHCHD5Q9BSY4 110 aa4.03□□□□□ -1.76
CRNDE-207ENST00000559598 FAT3Q8TDW7 4589 aa4.03□□□□□ -1.76
CRNDE-207ENST00000559598 LRP1Q07954 4544 aaKnown RBP4.03□□□□□ -1.76
CRNDE-207ENST00000559598 TMSB15BA0A087X1C1 80 aa4.02□□□□□ -1.77
CRNDE-207ENST00000559598 A8MTW9 85 aa4.02□□□□□ -1.77
CRNDE-207ENST00000559598 LEPROTO15243 131 aa4.02□□□□□ -1.77
CRNDE-207ENST00000559598 OXTP01178 125 aa4.02□□□□□ -1.77
CRNDE-207ENST00000559598 IGKV1-17P01599 117 aa4.02□□□□□ -1.77
CRNDE-207ENST00000559598 MRPS36P82909 103 aaKnown RBP4.02□□□□□ -1.77
CRNDE-207ENST00000559598 DAND5Q8N907 189 aa4.02□□□□□ -1.77
CRNDE-207ENST00000559598 TMEM263Q8WUH6 116 aaKnown RBP4.02□□□□□ -1.77
CRNDE-207ENST00000559598 C16orf74Q96GX8 76 aa4.02□□□□□ -1.77
CRNDE-207ENST00000559598 TIMM17AQ99595 171 aa4.02□□□□□ -1.77
CRNDE-207ENST00000559598 TTTY13Q9BZ97 58 aa4.02□□□□□ -1.77
CRNDE-207ENST00000559598 RNF213Q63HN8 5207 aa4.02□□□□□ -1.77
CRNDE-207ENST00000559598 PKHD1L1Q86WI1 4243 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 A0A087WTM6 91 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 A0A0J9YXY3 114 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 FAM236AA0A1B0GUQ0 79 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 FAM236BA0A1B0GV22 79 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 SMKR1H3BMG3 65 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 J3QQQ9 107 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 NDUFC2O95298 119 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 CRYGDP07320 174 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 CIRBPQ14011 172 aaKnown RBP4.01□□□□□ -1.77
CRNDE-207ENST00000559598 S100A7L2Q5SY68 101 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 C2orf66Q6UXQ4 117 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 DPH3P1Q9H4G8 78 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 PRO0628Q9UI54 55 aa4.01□□□□□ -1.77
CRNDE-207ENST00000559598 TEX49A0A1B0GTD5 131 aa4□□□□□ -1.77
CRNDE-207ENST00000559598 PLAC8L1A1L4L8 177 aa4□□□□□ -1.77
CRNDE-207ENST00000559598 SOCS3O14543 225 aa4□□□□□ -1.77
CRNDE-207ENST00000559598 BCE1O60756 84 aa4□□□□□ -1.77
CRNDE-207ENST00000559598 TIMM17BO60830 172 aa4□□□□□ -1.77
CRNDE-207ENST00000559598 ZNF415Q09FC8 603 aa4□□□□□ -1.77
CRNDE-207ENST00000559598 ESRGQ1W209 222 aa4□□□□□ -1.77
CRNDE-207ENST00000559598 C5orf38Q86SI9 138 aa4□□□□□ -1.77
CRNDE-207ENST00000559598 TRAV13-1A0A0B4J241 112 aa3.99□□□□□ -1.77
CRNDE-207ENST00000559598 KRTAP16-1A8MUX0 517 aa3.99□□□□□ -1.77
CRNDE-207ENST00000559598 H7C423 109 aa3.99□□□□□ -1.77
CRNDE-207ENST00000559598 LST1O00453 97 aa3.99□□□□□ -1.77
CRNDE-207ENST00000559598 MRPS12O15235 138 aaKnown RBP3.99□□□□□ -1.77
CRNDE-207ENST00000559598 DNAH10OSP0CZ25 163 aa3.99□□□□□ -1.77
CRNDE-207ENST00000559598 FUSP35637 526 aaKnown RBP eCLIP3.99□□□□□ -1.77
CRNDE-207ENST00000559598 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
CRNDE-207ENST00000559598 Q6ZQT7 251 aa3.99□□□□□ -1.77
CRNDE-207ENST00000559598 SERP2Q8N6R1 65 aa3.99□□□□□ -1.77
CRNDE-207ENST00000559598 DPH3Q96FX2 82 aa3.99□□□□□ -1.77
CRNDE-207ENST00000559598 MRPL36Q9P0J6 103 aaKnown RBP3.99□□□□□ -1.77
CRNDE-207ENST00000559598 LAMTOR3Q9UHA4 124 aa3.99□□□□□ -1.77
CRNDE-207ENST00000559598 TMEM223A0PJW6 202 aa3.98□□□□□ -1.77
CRNDE-207ENST00000559598 H3BTX0 84 aa3.98□□□□□ -1.77
CRNDE-207ENST00000559598 S100A4P26447 101 aaKnown RBP3.98□□□□□ -1.77
CRNDE-207ENST00000559598 DEFB1P60022 68 aa3.98□□□□□ -1.77
CRNDE-207ENST00000559598 RPL18AQ02543 176 aaKnown RBP3.98□□□□□ -1.77
CRNDE-207ENST00000559598 RHOHQ15669 191 aa3.98□□□□□ -1.77
CRNDE-207ENST00000559598 SFTA2Q6UW10 78 aa3.98□□□□□ -1.77
CRNDE-207ENST00000559598 SDIM1Q6ZPB5 146 aa3.98□□□□□ -1.77
CRNDE-207ENST00000559598 MUSTN1Q8IVN3 82 aa3.98□□□□□ -1.77
CRNDE-207ENST00000559598 RNF182Q8N6D2 247 aa3.98□□□□□ -1.77
CRNDE-207ENST00000559598 LINC00612Q8N6U2 182 aa3.98□□□□□ -1.77
CRNDE-207ENST00000559598 LINC00477Q96M19 166 aa3.98□□□□□ -1.77
CRNDE-207ENST00000559598 ICOSQ9Y6W8 199 aa3.98□□□□□ -1.77
CRNDE-207ENST00000559598 TRAV21A0A0B4J279 112 aa3.97□□□□□ -1.77
CRNDE-207ENST00000559598 F6UB75 175 aa3.97□□□□□ -1.77
CRNDE-207ENST00000559598 HAMPP81172 84 aa3.97□□□□□ -1.77
CRNDE-207ENST00000559598 SPINK13Q1W4C9 94 aa3.97□□□□□ -1.77
CRNDE-207ENST00000559598 ATP5EP2Q5VTU8 51 aa3.97□□□□□ -1.77
CRNDE-207ENST00000559598 AGPAT4-IT1Q9H0P7 198 aa3.97□□□□□ -1.77
CRNDE-207ENST00000559598 NOP10Q9NPE3 64 aaKnown RBP3.97□□□□□ -1.77
CRNDE-207ENST00000559598 PHLDA3Q9Y5J5 127 aa3.97□□□□□ -1.77
CRNDE-207ENST00000559598 TNXBP22105 4242 aa3.97□□□□□ -1.77
CRNDE-207ENST00000559598 LRP2P98164 4655 aa3.96□□□□□ -1.78
CRNDE-207ENST00000559598 IGLV7-46A0A075B6I9 117 aa3.96□□□□□ -1.78
CRNDE-207ENST00000559598 A0A096LPF7 62 aa3.96□□□□□ -1.78
CRNDE-207ENST00000559598 TRBV6-5A0A0K0K1A5 114 aa3.96□□□□□ -1.78
CRNDE-207ENST00000559598 IGIPA6NJ69 53 aa3.96□□□□□ -1.78
CRNDE-207ENST00000559598 RS1O15537 224 aa3.96□□□□□ -1.78
CRNDE-207ENST00000559598 NXPH4O95158 308 aa3.96□□□□□ -1.78
CRNDE-207ENST00000559598 ZNF22P17026 224 aaPredicted RBP3.96□□□□□ -1.78
CRNDE-207ENST00000559598 NPC2P61916 151 aa3.96□□□□□ -1.78
CRNDE-207ENST00000559598 Q6ZSA8 131 aa3.96□□□□□ -1.78
CRNDE-207ENST00000559598 VSIG2Q96IQ7 327 aa3.96□□□□□ -1.78
CRNDE-207ENST00000559598 LINC00467Q9BRT7 94 aa3.96□□□□□ -1.78
CRNDE-207ENST00000559598 TRAV12-2A0A075B6T6 113 aa3.95□□□□□ -1.78
CRNDE-207ENST00000559598 IGKV2-40A0A087WW87 121 aaPredicted RBP3.95□□□□□ -1.78
CRNDE-207ENST00000559598 LOC107984640A0A0U1RRK4 108 aa3.95□□□□□ -1.78
CRNDE-207ENST00000559598 H7C2G1 150 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms