RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 C11orf86A6NJI1 115 aa8.71□□□□□ -1.02
LRRC28-213ENST00000559399 TMEM170BQ5T4T1 132 aa8.71□□□□□ -1.02
LRRC28-213ENST00000559399 BAGE3Q86Y29 109 aa8.71□□□□□ -1.02
LRRC28-213ENST00000559399 LINC00304Q8N9R0 145 aa8.71□□□□□ -1.02
LRRC28-213ENST00000559399 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
LRRC28-213ENST00000559399 M0R378 163 aa8.7□□□□□ -1.02
LRRC28-213ENST00000559399 Q8NDZ9 215 aa8.69□□□□□ -1.02
LRRC28-213ENST00000559399 RETNLBQ9BQ08 111 aa8.68□□□□□ -1.02
LRRC28-213ENST00000559399 LINC00158P58513 81 aa8.66□□□□□ -1.02
LRRC28-213ENST00000559399 CBLN2Q8IUK8 224 aa8.66□□□□□ -1.02
LRRC28-213ENST00000559399 PLEKHB2Q96CS7 222 aa8.66□□□□□ -1.02
LRRC28-213ENST00000559399 CHTOPQ9Y3Y2 248 aaKnown RBP8.66□□□□□ -1.02
LRRC28-213ENST00000559399 HIGD2AQ9BW72 106 aa8.65□□□□□ -1.02
LRRC28-213ENST00000559399 CTAG1AP78358 180 aa8.64□□□□□ -1.03
LRRC28-213ENST00000559399 TMEM223A0PJW6 202 aa8.63□□□□□ -1.03
LRRC28-213ENST00000559399 APOC3P02656 99 aa8.63□□□□□ -1.03
LRRC28-213ENST00000559399 TPRXLQ17RH7 258 aa8.63□□□□□ -1.03
LRRC28-213ENST00000559399 A0A0U1RRA0 63 aa8.62□□□□□ -1.03
LRRC28-213ENST00000559399 CHCHD1Q96BP2 118 aaKnown RBP8.62□□□□□ -1.03
LRRC28-213ENST00000559399 CDIP1Q9H305 208 aa8.62□□□□□ -1.03
LRRC28-213ENST00000559399 IGLV7-46A0A075B6I9 117 aa8.61□□□□□ -1.03
LRRC28-213ENST00000559399 TRAV12-1A0A0B4J245 112 aa8.61□□□□□ -1.03
LRRC28-213ENST00000559399 SNAPINO95295 136 aa8.61□□□□□ -1.03
LRRC28-213ENST00000559399 NDUFA5Q16718 116 aa8.61□□□□□ -1.03
LRRC28-213ENST00000559399 SVBPQ8N300 66 aa8.61□□□□□ -1.03
LRRC28-213ENST00000559399 C3orf22Q8N5N4 141 aa8.61□□□□□ -1.03
LRRC28-213ENST00000559399 IFI27L1Q96BM0 104 aa8.61□□□□□ -1.03
LRRC28-213ENST00000559399 ATP6V1G1O75348 118 aa8.6□□□□□ -1.03
LRRC28-213ENST00000559399 SPRR4Q96PI1 79 aa8.6□□□□□ -1.03
LRRC28-213ENST00000559399 ZNF706Q9Y5V0 76 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-213ENST00000559399 PRYO14603 147 aa8.59□□□□□ -1.03
LRRC28-213ENST00000559399 SMIM13P0DJ93 91 aa8.59□□□□□ -1.03
LRRC28-213ENST00000559399 MEIG1Q5JSS6 88 aa8.59□□□□□ -1.03
LRRC28-213ENST00000559399 SPAG11AQ6PDA7 123 aa8.59□□□□□ -1.03
LRRC28-213ENST00000559399 BOD1L2Q8IYS8 172 aa8.59□□□□□ -1.03
LRRC28-213ENST00000559399 HERV-K104P63124 156 aa8.58□□□□□ -1.04
LRRC28-213ENST00000559399 NCR3O14931 201 aa8.57□□□□□ -1.04
LRRC28-213ENST00000559399 SMCPP49901 116 aaPredicted RBP8.57□□□□□ -1.04
LRRC28-213ENST00000559399 MIR7-3HGQ8N6C7 128 aa8.57□□□□□ -1.04
LRRC28-213ENST00000559399 LINC00587B1AMM8 73 aa8.56□□□□□ -1.04
LRRC28-213ENST00000559399 LINC00337Q8N6G1 96 aa8.56□□□□□ -1.04
LRRC28-213ENST00000559399 YPEL4Q96NS1 127 aa8.56□□□□□ -1.04
LRRC28-213ENST00000559399 HSBP1O75506 76 aa8.55□□□□□ -1.04
LRRC28-213ENST00000559399 SPRR1AP35321 89 aa8.55□□□□□ -1.04
LRRC28-213ENST00000559399 PPDPFQ9H3Y8 114 aa8.55□□□□□ -1.04
LRRC28-213ENST00000559399 KCNQ1DNQ9H478 68 aa8.55□□□□□ -1.04
LRRC28-213ENST00000559399 NDUFA12Q9UI09 145 aa8.55□□□□□ -1.04
LRRC28-213ENST00000559399 ETDCA0A1B0GVM5 59 aa8.54□□□□□ -1.04
LRRC28-213ENST00000559399 MAP1LC3CQ9BXW4 147 aa8.54□□□□□ -1.04
LRRC28-213ENST00000559399 FAT4Q6V0I7 4981 aa8.53□□□□□ -1.04
LRRC28-213ENST00000559399 MYMXA0A1B0GTQ4 84 aa8.53□□□□□ -1.04
LRRC28-213ENST00000559399 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-213ENST00000559399 TRBV10-3A0A0K0K1G6 114 aa8.52□□□□□ -1.05
LRRC28-213ENST00000559399 KRTAP4-16G5E9R7 235 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-213ENST00000559399 S100A12P80511 92 aa8.52□□□□□ -1.05
LRRC28-213ENST00000559399 FAM19A2Q8N3H0 131 aa8.52□□□□□ -1.05
LRRC28-213ENST00000559399 Q8NBF4 154 aa8.52□□□□□ -1.05
LRRC28-213ENST00000559399 SMCR5Q8TEV8 140 aa8.52□□□□□ -1.05
LRRC28-213ENST00000559399 H0Y8G0 127 aa8.51□□□□□ -1.05
LRRC28-213ENST00000559399 LCE2AQ5TA79 106 aaPredicted RBP8.51□□□□□ -1.05
LRRC28-213ENST00000559399 DAND5Q8N907 189 aa8.51□□□□□ -1.05
LRRC28-213ENST00000559399 A6NJY4 79 aa8.5□□□□□ -1.05
LRRC28-213ENST00000559399 LINC00483Q53H64 154 aa8.5□□□□□ -1.05
LRRC28-213ENST00000559399 TSPEAR-AS2P59090 65 aa8.49□□□□□ -1.05
LRRC28-213ENST00000559399 SPINK1P00995 79 aa8.48□□□□□ -1.05
LRRC28-213ENST00000559399 PLNP26678 52 aa8.48□□□□□ -1.05
LRRC28-213ENST00000559399 MUC17Q685J3 4493 aa8.47□□□□□ -1.05
LRRC28-213ENST00000559399 B5MCH6 92 aa8.47□□□□□ -1.05
LRRC28-213ENST00000559399 LEPROTO15243 131 aa8.47□□□□□ -1.05
LRRC28-213ENST00000559399 LEPROTL1O95214 131 aa8.47□□□□□ -1.05
LRRC28-213ENST00000559399 DDTP30046 118 aa8.47□□□□□ -1.05
LRRC28-213ENST00000559399 GAGE2AQ6NT46 116 aa8.47□□□□□ -1.05
LRRC28-213ENST00000559399 LOC107984156A0A0G2JMH3 177 aa8.46□□□□□ -1.06
LRRC28-213ENST00000559399 TRBV10-2A0A0K0K1G8 114 aa8.46□□□□□ -1.06
LRRC28-213ENST00000559399 TRGC2P03986 189 aa8.46□□□□□ -1.06
LRRC28-213ENST00000559399 ARL17AQ8IVW1 177 aa8.46□□□□□ -1.06
LRRC28-213ENST00000559399 MIEN1Q9BRT3 115 aa8.46□□□□□ -1.06
LRRC28-213ENST00000559399 KRTAP9-2Q9BYQ4 174 aa8.46□□□□□ -1.06
LRRC28-213ENST00000559399 J3QQQ9 107 aa8.45□□□□□ -1.06
LRRC28-213ENST00000559399 SERF1AO75920 110 aa8.45□□□□□ -1.06
LRRC28-213ENST00000559399 HERVK_113P61574 105 aa8.45□□□□□ -1.06
LRRC28-213ENST00000559399 KRTAP13-3Q3SY46 172 aa8.45□□□□□ -1.06
LRRC28-213ENST00000559399 SPANXB1Q9NS25 103 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-213ENST00000559399 HSPB8Q9UJY1 196 aa8.45□□□□□ -1.06
LRRC28-213ENST00000559399 ERC2-IT1O76042 136 aa8.44□□□□□ -1.06
LRRC28-213ENST00000559399 DPM2O94777 84 aa8.44□□□□□ -1.06
LRRC28-213ENST00000559399 NMUP48645 174 aa8.44□□□□□ -1.06
LRRC28-213ENST00000559399 LINC00310P59036 64 aa8.44□□□□□ -1.06
LRRC28-213ENST00000559399 MOBPQ13875 183 aa8.44□□□□□ -1.06
LRRC28-213ENST00000559399 IGLV9-49A0A0B4J1Y8 123 aa8.43□□□□□ -1.06
LRRC28-213ENST00000559399 LGALS3P17931 250 aaKnown RBP8.43□□□□□ -1.06
LRRC28-213ENST00000559399 Q6ZRX8 168 aa8.43□□□□□ -1.06
LRRC28-213ENST00000559399 RPS29P62273 56 aaKnown RBP8.42□□□□□ -1.06
LRRC28-213ENST00000559399 S100A7L2Q5SY68 101 aa8.42□□□□□ -1.06
LRRC28-213ENST00000559399 Q9BRP9 147 aa8.42□□□□□ -1.06
LRRC28-213ENST00000559399 NDUFC2O95298 119 aa8.41□□□□□ -1.06
LRRC28-213ENST00000559399 IGLV6-57P01721 117 aa8.41□□□□□ -1.06
LRRC28-213ENST00000559399 SSBP3-AS1Q7Z2R9 100 aa8.41□□□□□ -1.06
LRRC28-213ENST00000559399 PMCHL2Q9BQD1 86 aa8.41□□□□□ -1.06
LRRC28-213ENST00000559399 TRAV23DV6A0A075B6W5 121 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms